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Spg019560 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019560
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Genome locationscaffold5:30770844..30771599
RNA-Seq ExpressionSpg019560
SyntenySpg019560
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041264.1 hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa]6.4e-0736.84Show/hide
Query:  VEFSTRQINRIFRLQSLRCPAGNMAIKEPTTEQLAEALSMVAHEGVKWQESRTGVRTLLSGDLKPEATVWLYVIKNRIMQTTHDTTISQERVMLL
        V+F  + IN ++ L++     G++  + P    L +AL  +   G KW    T    L   DL  E +VWL  IK  IM T HD+TIS E +MLL
Subjt:  VEFSTRQINRIFRLQSLRCPAGNMAIKEPTTEQLAEALSMVAHEGVKWQESRTGVRTLLSGDLKPEATVWLYVIKNRIMQTTHDTTISQERVMLL

XP_038876674.1 chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]2.7e-1340.82Show/hide
Query:  LHGQVVEFSTRQINRIFRLQSLRCPAGNMAIKEPTTEQLAEALSMVAHEGVKWQESRTGVRTLLSGDLKPEATVWLYVIKNRIMQTTHDTTISQERVM
        L  + V FS R IN I++++     +GN  I +PT +Q+ +AL ++   G+KW  S  GV TL S  L  E  +W+Y++K R++ TTHD T+S++RVM
Subjt:  LHGQVVEFSTRQINRIFRLQSLRCPAGNMAIKEPTTEQLAEALSMVAHEGVKWQESRTGVRTLLSGDLKPEATVWLYVIKNRIMQTTHDTTISQERVM

XP_038888747.1 vicilin-like seed storage protein At2g18540 [Benincasa hispida]3.1e-0931.58Show/hide
Query:  MLLHGQVVEFSTRQINRIFRLQSLRCPAGNMAIKEPTTEQLAEALSMVAHEGVKWQESRTGVRTLLSGDLKPEATVWLYVIKNRIMQTTHDTTIS
        +++ G  V FS R IN +++++ +    GN  I +P    + + L ++   G +W  S   ++TL S  L PEA +W+Y++K R++ T+H+ T+S
Subjt:  MLLHGQVVEFSTRQINRIFRLQSLRCPAGNMAIKEPTTEQLAEALSMVAHEGVKWQESRTGVRTLLSGDLKPEATVWLYVIKNRIMQTTHDTTIS

XP_038898613.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120086174 [Benincasa hispida]9.5e-1136.17Show/hide
Query:  GQVVEFSTRQINRIFRLQSLRCPAGNMAIKEPTTEQLAEALSMVAHEGVKWQESRTGVRTLLSGDLKPEATVWLYVIKNRIMQTTHDTTISQER
        G+ V FST+ IN +++++      GN  I +PT E +  AL ++A  G +W  S  G+RTL S  L  +  +W+Y++K +++ TTHD T+S+++
Subjt:  GQVVEFSTRQINRIFRLQSLRCPAGNMAIKEPTTEQLAEALSMVAHEGVKWQESRTGVRTLLSGDLKPEATVWLYVIKNRIMQTTHDTTISQER

XP_038904385.1 uncharacterized protein LOC120090747 [Benincasa hispida]1.4e-1438Show/hide
Query:  MLLHGQVVEFSTRQINRIFRLQSLRCPAGNMAIKEPTTEQLAEALSMVAHEGVKWQESRTGVRTLLSGDLKPEATVWLYVIKNRIMQTTHDTTISQERVM
        +++ G +V FS R IN +++++ +   +GN  I +P  E++ +AL  +   G +W  S  G++TL S  L PEA +W+Y++K RI+ T+HD T+S++RVM
Subjt:  MLLHGQVVEFSTRQINRIFRLQSLRCPAGNMAIKEPTTEQLAEALSMVAHEGVKWQESRTGVRTLLSGDLKPEATVWLYVIKNRIMQTTHDTTISQERVM

TrEMBL top hitse value%identityAlignment
A0A2P5BNT0 Uncharacterized protein (Fragment)5.3e-0736Show/hide
Query:  LHGQVVEFSTRQINRIFRLQSLRCPAGNMAIKEPTTEQLAEALSMVAHEGVKWQESRTGVRTLLSGDLKPEATVWLYVIKNRIMQTTHDTTISQERVMLL
        + G  V  S   IN I+ L  L     +  +++ T  +LA  L  VA  G +W  S  GV T L   L P A +W + +K+R++ TTH   +S+ERV+LL
Subjt:  LHGQVVEFSTRQINRIFRLQSLRCPAGNMAIKEPTTEQLAEALSMVAHEGVKWQESRTGVRTLLSGDLKPEATVWLYVIKNRIMQTTHDTTISQERVMLL

A0A2P5DAQ2 Uncharacterized protein1.0e-0536.27Show/hide
Query:  LHGQVVEFSTRQINRIFRLQSLRCPAGNMA--IKEPTTEQLAEALSMVAHEGVKWQESRTGVRTLLSGDLKPEATVWLYVIKNRIMQTTHDTTISQERVM
        + G  V  S   IN IF   SL  P    +  +++ T  +L   L  VA  G +W  S  G  T L   L P A VW + +K+R++ TTH  T+S+E V 
Subjt:  LHGQVVEFSTRQINRIFRLQSLRCPAGNMA--IKEPTTEQLAEALSMVAHEGVKWQESRTGVRTLLSGDLKPEATVWLYVIKNRIMQTTHDTTISQERVM

Query:  LL
        LL
Subjt:  LL

A0A5A7TZE0 Protein MNN4-like1.2e-0635.64Show/hide
Query:  LLHGQVVEFSTRQINRIFRLQSLRCPAGNMAIKEPTTEQLAEALSMVAHEGVKWQESRTGVRTLLSGDLKPEATVWLYVIKNRIMQTTHDTTISQERVML
        ++ G++V F  + +N ++ L+  +        KEP+   +  AL  VA  G+KW  +      L   +LK  A+VWL  IK  +M T HD TIS ER+ML
Subjt:  LLHGQVVEFSTRQINRIFRLQSLRCPAGNMAIKEPTTEQLAEALSMVAHEGVKWQESRTGVRTLLSGDLKPEATVWLYVIKNRIMQTTHDTTISQERVML

Query:  L
        L
Subjt:  L

A0A5D3CW17 Uncharacterized protein3.1e-0736.84Show/hide
Query:  VEFSTRQINRIFRLQSLRCPAGNMAIKEPTTEQLAEALSMVAHEGVKWQESRTGVRTLLSGDLKPEATVWLYVIKNRIMQTTHDTTISQERVMLL
        V+F  + IN ++ L++     G++  + P    L +AL  +   G KW    T    L   DL  E +VWL  IK  IM T HD+TIS E +MLL
Subjt:  VEFSTRQINRIFRLQSLRCPAGNMAIKEPTTEQLAEALSMVAHEGVKWQESRTGVRTLLSGDLKPEATVWLYVIKNRIMQTTHDTTISQERVMLL

A0A5D3D7L3 Uncharacterized protein5.3e-0735.64Show/hide
Query:  LLHGQVVEFSTRQINRIFRLQSLRCPAGNMAIKEPTTEQLAEALSMVAHEGVKWQESRTGVRTLLSGDLKPEATVWLYVIKNRIMQTTHDTTISQERVML
        ++ G+ V+F    IN++F L++      +   K P    L +AL  VA    KW    TG   L   +L  EA +WL  +KN I  T HD+TIS E +ML
Subjt:  LLHGQVVEFSTRQINRIFRLQSLRCPAGNMAIKEPTTEQLAEALSMVAHEGVKWQESRTGVRTLLSGDLKPEATVWLYVIKNRIMQTTHDTTISQERVML

Query:  L
        +
Subjt:  L

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCCTGCATGGTCAAGTGGTGGAGTTCTCGACAAGGCAAATCAATCGGATTTTCCGATTACAATCCCTCAGATGCCCAGCTGGCAACATGGCCATTAAAGAACCAAC
AACTGAGCAGCTGGCAGAGGCCTTATCTATGGTGGCCCACGAGGGAGTGAAGTGGCAAGAGTCCAGGACTGGAGTCAGGACTCTATTATCAGGAGACTTAAAGCCAGAGG
CAACGGTCTGGCTTTACGTGATCAAAAACAGGATCATGCAAACCACACATGACACCACCATATCTCAGGAGCGTGTCATGTTATTGCTTGCAGGAGTGGGGCCAGAAGAG
AAAGAAGAAAAAGAAGTTGCCCGGACATCAATTGACCTGAGCTTAATCAAGAAGCTCATAGCCAATTCTAAGCAAAAGGTGACCTCTCCAGAGAAGAAGGCTCGAGCAAC
CCCTCTTGCAGCTCAAGCATCAAAGTCTCCAGAAAAAGCCATTGTTGCAGAAAAAGATGCGACCGCAAACACATCGCAAAATTTACTAGAATGCGGCCGCAAATCAGCAG
CAGCCTCCAACGCCTCAACCACAACCCGAAAACAACTTGGTGGCTTTAAGGAGAGACCTGAAGCGAATGAGGAGCCAGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTCCTGCATGGTCAAGTGGTGGAGTTCTCGACAAGGCAAATCAATCGGATTTTCCGATTACAATCCCTCAGATGCCCAGCTGGCAACATGGCCATTAAAGAACCAAC
AACTGAGCAGCTGGCAGAGGCCTTATCTATGGTGGCCCACGAGGGAGTGAAGTGGCAAGAGTCCAGGACTGGAGTCAGGACTCTATTATCAGGAGACTTAAAGCCAGAGG
CAACGGTCTGGCTTTACGTGATCAAAAACAGGATCATGCAAACCACACATGACACCACCATATCTCAGGAGCGTGTCATGTTATTGCTTGCAGGAGTGGGGCCAGAAGAG
AAAGAAGAAAAAGAAGTTGCCCGGACATCAATTGACCTGAGCTTAATCAAGAAGCTCATAGCCAATTCTAAGCAAAAGGTGACCTCTCCAGAGAAGAAGGCTCGAGCAAC
CCCTCTTGCAGCTCAAGCATCAAAGTCTCCAGAAAAAGCCATTGTTGCAGAAAAAGATGCGACCGCAAACACATCGCAAAATTTACTAGAATGCGGCCGCAAATCAGCAG
CAGCCTCCAACGCCTCAACCACAACCCGAAAACAACTTGGTGGCTTTAAGGAGAGACCTGAAGCGAATGAGGAGCCAGTTTAG
Protein sequenceShow/hide protein sequence
MLLHGQVVEFSTRQINRIFRLQSLRCPAGNMAIKEPTTEQLAEALSMVAHEGVKWQESRTGVRTLLSGDLKPEATVWLYVIKNRIMQTTHDTTISQERVMLLLAGVGPEE
KEEKEVARTSIDLSLIKKLIANSKQKVTSPEKKARATPLAAQASKSPEKAIVAEKDATANTSQNLLECGRKSAAASNASTTTRKQLGGFKERPEANEEPV