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Spg019563 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019563
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionphotosystem I subunit O
Genome locationscaffold5:29622268..29624914
RNA-Seq ExpressionSpg019563
SyntenySpg019563
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR017498 - Photosystem I PsaO


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008463649.1 PREDICTED: photosystem I subunit O [Cucumis melo]1.4e-6991.84Show/hide
Query:  MATAFATSSTIVGLGSSSLSSPSSRSPRLASGFVKSPVAARNPLGVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA
        MATAFATSS + GLG++SLSSPSSRSPRL SGF+KSPVAARNPL V RAS GRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVI+GKSLTGLFFESIG 
Subjt:  MATAFATSSTIVGLGSSSLSSPSSRSPRLASGFVKSPVAARNPLGVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA

Query:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
        ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
Subjt:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

XP_022142590.1 photosystem I subunit O [Momordica charantia]5.2e-7295.27Show/hide
Query:  MATAFATSSTIVGLG-SSSLSSPSSRSPRLASGFVKSPVAARNPLGVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIG
        MATAFATSSTIVGLG SSSLSSPSSRSPRLAS FVKSP AARNPL VARASGGRFTCFERDWLRRDLNVIGFGLIGW+APSSIPVI+GKSLTGLFFESIG
Subjt:  MATAFATSSTIVGLG-SSSLSSPSSRSPRLASGFVKSPVAARNPLGVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIG

Query:  AELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
        AELAHFPSPPALTSQFWLWL+TWHLGLFITLTFGQIGFKGRTEDYFSK
Subjt:  AELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

XP_022973174.1 photosystem I subunit O [Cucurbita maxima]1.5e-7191.84Show/hide
Query:  MATAFATSSTIVGLGSSSLSSPSSRSPRLASGFVKSPVAARNPLGVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA
        MA+AFATSS++VGLGSSSLSSPSSRSPRL SGF+K PV ARNP GVAR+ GGRFTCF+RDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA
Subjt:  MATAFATSSTIVGLGSSSLSSPSSRSPRLASGFVKSPVAARNPLGVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA

Query:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
        ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYF K
Subjt:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

XP_023520691.1 photosystem I subunit O [Cucurbita pepo subsp. pepo]1.4e-6990.48Show/hide
Query:  MATAFATSSTIVGLGSSSLSSPSSRSPRLASGFVKSPVAARNPLGVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA
        MA+AFATSS++VGLGSSSLSSPSSRSPRL S FVK PV ARNP GVAR+ GGR TCF+RDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIG 
Subjt:  MATAFATSSTIVGLGSSSLSSPSSRSPRLASGFVKSPVAARNPLGVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA

Query:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
        ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYF K
Subjt:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

XP_038895620.1 photosystem I subunit O [Benincasa hispida]6.8e-7293.2Show/hide
Query:  MATAFATSSTIVGLGSSSLSSPSSRSPRLASGFVKSPVAARNPLGVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA
        MATAFATSS++VGLG++SLSSPSSRSPRL SGFVK PV ARNP  VARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVI+GKSLTGLFFESIGA
Subjt:  MATAFATSSTIVGLGSSSLSSPSSRSPRLASGFVKSPVAARNPLGVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA

Query:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
        ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
Subjt:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

TrEMBL top hitse value%identityAlignment
A0A0A0LT61 Uncharacterized protein6.8e-7091.84Show/hide
Query:  MATAFATSSTIVGLGSSSLSSPSSRSPRLASGFVKSPVAARNPLGVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA
        MATAFATSS + GLG++SLSSPSSRSPRL SGF+K PVAARNPL VA ASGG+FTCFERDWLRRDLNVIGFGLIGWIAPSSIPVI GKSLTGLFFESIGA
Subjt:  MATAFATSSTIVGLGSSSLSSPSSRSPRLASGFVKSPVAARNPLGVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA

Query:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
        ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
Subjt:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

A0A1S3CJR4 photosystem I subunit O6.8e-7091.84Show/hide
Query:  MATAFATSSTIVGLGSSSLSSPSSRSPRLASGFVKSPVAARNPLGVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA
        MATAFATSS + GLG++SLSSPSSRSPRL SGF+KSPVAARNPL V RAS GRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVI+GKSLTGLFFESIG 
Subjt:  MATAFATSSTIVGLGSSSLSSPSSRSPRLASGFVKSPVAARNPLGVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA

Query:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
        ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
Subjt:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

A0A6J1CLD0 photosystem I subunit O2.5e-7295.27Show/hide
Query:  MATAFATSSTIVGLG-SSSLSSPSSRSPRLASGFVKSPVAARNPLGVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIG
        MATAFATSSTIVGLG SSSLSSPSSRSPRLAS FVKSP AARNPL VARASGGRFTCFERDWLRRDLNVIGFGLIGW+APSSIPVI+GKSLTGLFFESIG
Subjt:  MATAFATSSTIVGLG-SSSLSSPSSRSPRLASGFVKSPVAARNPLGVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIG

Query:  AELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
        AELAHFPSPPALTSQFWLWL+TWHLGLFITLTFGQIGFKGRTEDYFSK
Subjt:  AELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

A0A6J1EID2 photosystem I subunit O2.6e-6989.8Show/hide
Query:  MATAFATSSTIVGLGSSSLSSPSSRSPRLASGFVKSPVAARNPLGVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA
        MA+AFATSS++VGLGSSSLSSPSSRSPRL S FVK PV ARNP GV R+ GGR TCF+RDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIG 
Subjt:  MATAFATSSTIVGLGSSSLSSPSSRSPRLASGFVKSPVAARNPLGVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA

Query:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
        ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYF K
Subjt:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

A0A6J1IDS7 photosystem I subunit O7.3e-7291.84Show/hide
Query:  MATAFATSSTIVGLGSSSLSSPSSRSPRLASGFVKSPVAARNPLGVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA
        MA+AFATSS++VGLGSSSLSSPSSRSPRL SGF+K PV ARNP GVAR+ GGRFTCF+RDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA
Subjt:  MATAFATSSTIVGLGSSSLSSPSSRSPRLASGFVKSPVAARNPLGVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA

Query:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
        ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYF K
Subjt:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

SwissProt top hitse value%identityAlignment
Q949Q5 Photosystem I subunit O1.7e-5772.41Show/hide
Query:  MATAFATSSTIVGLGSSSLSSPSSRSPRLASGFVKSPVAARNPLGVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA
        MA  FAT ST++GLG SS+++        +S F+K  ++A+NPL +A ASGGR TCFER+WLRRDLNV+GFGLIGW+APSSIP I+GKSLTGLFF+SIG 
Subjt:  MATAFATSSTIVGLGSSSLSSPSSRSPRLASGFVKSPVAARNPLGVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA

Query:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYF
        ELAHFP+PPALTSQFWLWL+TWHLGLF+ LTFGQIGFKGRTEDYF
Subjt:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYF

Arabidopsis top hitse value%identityAlignment
AT1G08380.1 photosystem I subunit O1.2e-5872.41Show/hide
Query:  MATAFATSSTIVGLGSSSLSSPSSRSPRLASGFVKSPVAARNPLGVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA
        MA  FAT ST++GLG SS+++        +S F+K  ++A+NPL +A ASGGR TCFER+WLRRDLNV+GFGLIGW+APSSIP I+GKSLTGLFF+SIG 
Subjt:  MATAFATSSTIVGLGSSSLSSPSSRSPRLASGFVKSPVAARNPLGVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA

Query:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYF
        ELAHFP+PPALTSQFWLWL+TWHLGLF+ LTFGQIGFKGRTEDYF
Subjt:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACCGCCTTCGCTACCTCTTCCACCATCGTCGGCCTCGGAAGCTCCTCCCTCTCCTCTCCTTCCTCCAGATCTCCTCGCCTCGCCTCCGGGTTCGTCAAATCGCC
GGTGGCCGCCAGGAATCCGCTCGGCGTGGCGCGTGCATCCGGCGGAAGGTTCACGTGCTTTGAGAGAGATTGGCTGAGGAGAGATCTGAATGTGATCGGATTTGGACTGA
TCGGGTGGATTGCGCCGTCGAGCATTCCGGTGATCGACGGGAAGAGCTTGACCGGGCTCTTCTTTGAGAGCATTGGAGCAGAGCTTGCGCATTTTCCCTCTCCACCAGCC
CTCACTTCTCAATTCTGGCTGTGGCTGATTACGTGGCACTTGGGTCTGTTCATTACGCTTACCTTCGGACAAATTGGGTTCAAGGGGAGGACCGAAGACTACTTTTCGAA
GTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACCGCCTTCGCTACCTCTTCCACCATCGTCGGCCTCGGAAGCTCCTCCCTCTCCTCTCCTTCCTCCAGATCTCCTCGCCTCGCCTCCGGGTTCGTCAAATCGCC
GGTGGCCGCCAGGAATCCGCTCGGCGTGGCGCGTGCATCCGGCGGAAGGTTCACGTGCTTTGAGAGAGATTGGCTGAGGAGAGATCTGAATGTGATCGGATTTGGACTGA
TCGGGTGGATTGCGCCGTCGAGCATTCCGGTGATCGACGGGAAGAGCTTGACCGGGCTCTTCTTTGAGAGCATTGGAGCAGAGCTTGCGCATTTTCCCTCTCCACCAGCC
CTCACTTCTCAATTCTGGCTGTGGCTGATTACGTGGCACTTGGGTCTGTTCATTACGCTTACCTTCGGACAAATTGGGTTCAAGGGGAGGACCGAAGACTACTTTTCGAA
GTGA
Protein sequenceShow/hide protein sequence
MATAFATSSTIVGLGSSSLSSPSSRSPRLASGFVKSPVAARNPLGVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGAELAHFPSPPA
LTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK