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Spg019566 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019566
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein CLAVATA 3
Genome locationscaffold5:30599604..30600102
RNA-Seq ExpressionSpg019566
SyntenySpg019566
Gene Ontology termsGO:0045168 - cell-cell signaling involved in cell fate commitment (biological process)
GO:0033612 - receptor serine/threonine kinase binding (molecular function)
InterPro domainsIPR039818 - CLAVATA3
IPR044962 - CLV3/ESR signal peptide family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054350.1 protein CLAVATA 3 [Cucumis melo var. makuwa]4.3e-0969.81Show/hide
Query:  SRKMLRQMKKDMEEEVDGRRRRWPPVEGDQLRRVPSGPDPLHHNGGSPKKPRT
        SRKM+ +MKK+MEE   G +R     E +QLRRVPSGPDPLHHNGGSPKKPRT
Subjt:  SRKMLRQMKKDMEEEVDGRRRRWPPVEGDQLRRVPSGPDPLHHNGGSPKKPRT

KAE8652825.1 hypothetical protein Csa_022700, partial [Cucumis sativus]9.0e-1555.56Show/hide
Query:  AFLSLLLLLFLLTHTLSSA---------GRCGFISATPPLFRPSSKSRKMLRQMKKDMEEEVDGRRRRWPPVEGDQLRRVPSGPDPLHHNGGSPKKPRT
        +FLSLLLL F L H L S+         GRC ++S    + R    SRKML +MKK+MEE   G +R     E +QLRRVPSGPDPLHHNGGSPKKPRT
Subjt:  AFLSLLLLLFLLTHTLSSA---------GRCGFISATPPLFRPSSKSRKMLRQMKKDMEEEVDGRRRRWPPVEGDQLRRVPSGPDPLHHNGGSPKKPRT

KAE8692998.1 Protein CLAVATA 3 [Hibiscus syriacus]3.4e-0646.59Show/hide
Query:  LLLLLFLLTHTLSSAGRCGFISATPPLFRPSSKSRKMLRQMKKDMEEEVDGRRRRWPPVEGDQLRRVPSGPDPLHHNGGSPKKPRTTP
        LLL+ FL+ H     G CG +S     F   S++RKML Q + +      G R        +  R VPSGPDPLHHNGGSPKKPRT P
Subjt:  LLLLLFLLTHTLSSAGRCGFISATPPLFRPSSKSRKMLRQMKKDMEEEVDGRRRRWPPVEGDQLRRVPSGPDPLHHNGGSPKKPRTTP

KAG6583691.1 hypothetical protein SDJN03_19623, partial [Cucurbita argyrosperma subsp. sororia]2.8e-1660.19Show/hide
Query:  MAASKFLFSFAFLSLLLLLFLLTHTLSSAG---RCGFISATPPLFRPSSKSRKMLRQMKKDMEEEVDGRRRRWPPVEGDQLRRVPSGPDPLHHNGGSPKK
        MA S  +F     SLLLL+F L+H  SSA    R   +  TPPL R + ++RKMLR+M K++  EVDG  RR P VE DQLRRVPSGPDPLHHNGGSPKK
Subjt:  MAASKFLFSFAFLSLLLLLFLLTHTLSSAG---RCGFISATPPLFRPSSKSRKMLRQMKKDMEEEVDGRRRRWPPVEGDQLRRVPSGPDPLHHNGGSPKK

Query:  PRT
        PRT
Subjt:  PRT

XP_038877536.1 protein CLAVATA 3 [Benincasa hispida]5.5e-2059.05Show/hide
Query:  AASKFLFSFAFLSLLLLLFLLTHT------LSSAGRCGFISATPPLFRPSSKSRKMLRQMKKDMEEEVDGRRRRWPPVEGDQLRRVPSGPDPLHHNGGSP
        ++SKF+ SFAF SLLLL+F L  +        +  RC  +S  PP+ R    SRKML++MKK+MEE VDG +R WP  E +QLRRVPSGPDPLHHNGGSP
Subjt:  AASKFLFSFAFLSLLLLLFLLTHT------LSSAGRCGFISATPPLFRPSSKSRKMLRQMKKDMEEEVDGRRRRWPPVEGDQLRRVPSGPDPLHHNGGSP

Query:  KKPRT
        KKPRT
Subjt:  KKPRT

TrEMBL top hitse value%identityAlignment
A0A0D2S155 Uncharacterized protein7.0e-0543.53Show/hide
Query:  LLFLLTHTLSSAGRCGFISATPPLFRPSSKSRKMLRQMKKDMEEEVDGRRRRWPPVEGDQLRRVPSGPDPLHHNGGSPKKPRTTP
        L+  L + L   G CG +S         +++RK+L    K+    + G       V G +LR VPSGPDPLHHNGGSPKKPRT P
Subjt:  LLFLLTHTLSSAGRCGFISATPPLFRPSSKSRKMLRQMKKDMEEEVDGRRRRWPPVEGDQLRRVPSGPDPLHHNGGSPKKPRTTP

A0A2P5QPW6 Uncharacterized protein7.0e-0543.53Show/hide
Query:  LLFLLTHTLSSAGRCGFISATPPLFRPSSKSRKMLRQMKKDMEEEVDGRRRRWPPVEGDQLRRVPSGPDPLHHNGGSPKKPRTTP
        L+  L + L   G CG +S         +++RK+L    K+    + G       V G +LR VPSGPDPLHHNGGSPKKPRT P
Subjt:  LLFLLTHTLSSAGRCGFISATPPLFRPSSKSRKMLRQMKKDMEEEVDGRRRRWPPVEGDQLRRVPSGPDPLHHNGGSPKKPRTTP

A0A5A7UGG1 Protein CLAVATA 32.1e-0969.81Show/hide
Query:  SRKMLRQMKKDMEEEVDGRRRRWPPVEGDQLRRVPSGPDPLHHNGGSPKKPRT
        SRKM+ +MKK+MEE   G +R     E +QLRRVPSGPDPLHHNGGSPKKPRT
Subjt:  SRKMLRQMKKDMEEEVDGRRRRWPPVEGDQLRRVPSGPDPLHHNGGSPKKPRT

A0A6A1WP99 Uncharacterized protein7.0e-0542Show/hide
Query:  ASKFLFSFAFLSLLLLLFLLTHTLSSAGRCGFISATPPLFRPSSKSRKMLRQMKKDMEEEVDG--RRRRWPPVEGDQLRRVPSGPDPLHHNGGSPKKPRT
        ASK +F    L +LL L LL    ++  RC F  A   L   + K    L+  K+ ++  + G         + G +LR VPSGPDPLHHNGGSPKKPRT
Subjt:  ASKFLFSFAFLSLLLLLFLLTHTLSSAGRCGFISATPPLFRPSSKSRKMLRQMKKDMEEEVDG--RRRRWPPVEGDQLRRVPSGPDPLHHNGGSPKKPRT

A0A6A2ZM99 Protein CLAVATA 31.7e-0646.59Show/hide
Query:  LLLLLFLLTHTLSSAGRCGFISATPPLFRPSSKSRKMLRQMKKDMEEEVDGRRRRWPPVEGDQLRRVPSGPDPLHHNGGSPKKPRTTP
        LLL+ FL+ H     G CG +S     F   S++RKML Q + +      G R        +  R VPSGPDPLHHNGGSPKKPRT P
Subjt:  LLLLLFLLTHTLSSAGRCGFISATPPLFRPSSKSRKMLRQMKKDMEEEVDGRRRRWPPVEGDQLRRVPSGPDPLHHNGGSPKKPRTTP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCTCAAAATTCTTGTTTTCCTTTGCATTCCTTTCCCTTCTCCTTCTCCTTTTCTTGCTCACTCACACTCTTTCTTCTGCCGGACGATGCGGTTTCATTTCCGC
TACACCGCCCCTCTTCCGACCCTCGTCTAAGAGCCGCAAGATGCTTCGACAGATGAAGAAGGACATGGAAGAAGAAGTTGACGGCCGCAGGAGACGCTGGCCGCCGGTGG
AGGGGGACCAGCTGCGGAGGGTGCCGTCGGGGCCTGACCCATTACACCACAATGGAGGAAGCCCTAAAAAGCCTCGAACGACTCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCCTCAAAATTCTTGTTTTCCTTTGCATTCCTTTCCCTTCTCCTTCTCCTTTTCTTGCTCACTCACACTCTTTCTTCTGCCGGACGATGCGGTTTCATTTCCGC
TACACCGCCCCTCTTCCGACCCTCGTCTAAGAGCCGCAAGATGCTTCGACAGATGAAGAAGGACATGGAAGAAGAAGTTGACGGCCGCAGGAGACGCTGGCCGCCGGTGG
AGGGGGACCAGCTGCGGAGGGTGCCGTCGGGGCCTGACCCATTACACCACAATGGAGGAAGCCCTAAAAAGCCTCGAACGACTCCATGA
Protein sequenceShow/hide protein sequence
MAASKFLFSFAFLSLLLLLFLLTHTLSSAGRCGFISATPPLFRPSSKSRKMLRQMKKDMEEEVDGRRRRWPPVEGDQLRRVPSGPDPLHHNGGSPKKPRTTP