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Spg019613 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019613
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionNuclear transcription factor Y subunit gamma
Genome locationscaffold5:34721224..34725960
RNA-Seq ExpressionSpg019613
SyntenySpg019613
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573498.1 hypothetical protein SDJN03_27385, partial [Cucurbita argyrosperma subsp. sororia]1.5e-3987.61Show/hide
Query:  RASKKHGHIAVLEEQKNEAAENEAADKVEDEANKSNDVEPGSAVASSKGELQDEKPDINDVPMEESQSQDNDHAVRQDLNESTLDLSLNLNALNDDGEAA
        R   K+  IAVLEEQKNEAAENE ADKVE EANKSNDVEPGSAVAS+KGELQDEKPDINDVPM+E  SQDNDH VRQDLNESTLDLSLNLNALNDDGEA 
Subjt:  RASKKHGHIAVLEEQKNEAAENEAADKVEDEANKSNDVEPGSAVASSKGELQDEKPDINDVPMEESQSQDNDHAVRQDLNESTLDLSLNLNALNDDGEAA

Query:  SKADHIRDGKRKG
        SKADHIRDGKRKG
Subjt:  SKADHIRDGKRKG

XP_004150426.1 uncharacterized protein LOC101221727 [Cucumis sativus]1.8e-3582.3Show/hide
Query:  RASKKHGHIAVLEEQKNEAAENEAADKVEDEANKSNDVEPGSAVASSKGELQDEKPDINDVPMEESQSQDNDHAVRQDLNESTLDLSLNLNALNDDGEAA
        R   K+  IAVLEEQKNEAAENEA D VEDEA +S+DVEP S VA +KGELQDEKPDINDVPMEESQSQDND  VRQDLNESTLDLSLNLNAL+D GEA+
Subjt:  RASKKHGHIAVLEEQKNEAAENEAADKVEDEANKSNDVEPGSAVASSKGELQDEKPDINDVPMEESQSQDNDHAVRQDLNESTLDLSLNLNALNDDGEAA

Query:  SKADHIRDGKRKG
        SKADHIRDGKRKG
Subjt:  SKADHIRDGKRKG

XP_022925360.1 uncharacterized protein LOC111432647 [Cucurbita moschata]1.5e-3987.61Show/hide
Query:  RASKKHGHIAVLEEQKNEAAENEAADKVEDEANKSNDVEPGSAVASSKGELQDEKPDINDVPMEESQSQDNDHAVRQDLNESTLDLSLNLNALNDDGEAA
        R   K+  IAVLEEQKNEAAENE ADKVE EANKSNDVEPGSAVAS+KGELQDEKPDINDVPM+E  SQDNDH VRQDLNESTLDLSLNLNALNDDGEA 
Subjt:  RASKKHGHIAVLEEQKNEAAENEAADKVEDEANKSNDVEPGSAVASSKGELQDEKPDINDVPMEESQSQDNDHAVRQDLNESTLDLSLNLNALNDDGEAA

Query:  SKADHIRDGKRKG
        SKADHIRDGKRKG
Subjt:  SKADHIRDGKRKG

XP_022994887.1 uncharacterized protein LOC111490478 [Cucurbita maxima]1.7e-3886.61Show/hide
Query:  RASKKHGHIAVLEEQKNEAAENEAADKVEDEANKSNDVEPGSAVASSKGELQDEKPDINDVPMEESQSQDNDHAVRQDLNESTLDLSLNLNALNDDGEAA
        R   K+  IAVLEEQKNEAAENEAADKVE EANKSNDVEPGSAVAS+KG+LQDEKP+INDVPM+E  SQDNDH VRQDLNESTLDLSLNLNALNDDGEA 
Subjt:  RASKKHGHIAVLEEQKNEAAENEAADKVEDEANKSNDVEPGSAVASSKGELQDEKPDINDVPMEESQSQDNDHAVRQDLNESTLDLSLNLNALNDDGEAA

Query:  SKADHIRDGKRK
        SKADHIRDGKRK
Subjt:  SKADHIRDGKRK

XP_023521102.1 uncharacterized protein LOC111784726 [Cucurbita pepo subsp. pepo]5.3e-4088.5Show/hide
Query:  RASKKHGHIAVLEEQKNEAAENEAADKVEDEANKSNDVEPGSAVASSKGELQDEKPDINDVPMEESQSQDNDHAVRQDLNESTLDLSLNLNALNDDGEAA
        R   K+  IAVLEEQKNEAAENEAADKVE EANKSNDVEPGSAVAS+KGELQDEKPDINDVPM+E  SQDNDH VRQDLNESTLDLSLNLNALNDDGEA 
Subjt:  RASKKHGHIAVLEEQKNEAAENEAADKVEDEANKSNDVEPGSAVASSKGELQDEKPDINDVPMEESQSQDNDHAVRQDLNESTLDLSLNLNALNDDGEAA

Query:  SKADHIRDGKRKG
        SKADHIRDGKRKG
Subjt:  SKADHIRDGKRKG

TrEMBL top hitse value%identityAlignment
A0A0A0LVV2 Uncharacterized protein1.5e-3586.67Show/hide
Query:  IAVLEEQKNEAAENEAADKVEDEANKSNDVEPGSAVASSKGELQDEKPDINDVPMEESQSQDNDHAVRQDLNESTLDLSLNLNALNDDGEAASKADHIRD
        IAVLEEQKNEAAENEA D VEDEA +S+DVEP S VA +KGELQDEKPDINDVPMEESQSQDND  VRQDLNESTLDLSLNLNAL+D GEA+SKADHIRD
Subjt:  IAVLEEQKNEAAENEAADKVEDEANKSNDVEPGSAVASSKGELQDEKPDINDVPMEESQSQDNDHAVRQDLNESTLDLSLNLNALNDDGEAASKADHIRD

Query:  GKRKG
        GKRKG
Subjt:  GKRKG

A0A5D3CMI7 Putative serine/threonine-protein kinase4.2e-3583.19Show/hide
Query:  RASKKHGHIAVLEEQKNEAAENEAADKVEDEANKSNDVEPGSAVASSKGELQDEKPDINDVPMEESQSQDNDHAVRQDLNESTLDLSLNLNALNDDGEAA
        R   K+  IAVLEEQKNEAAENEAAD VEDEA KSNDVEP S VA +KGELQDEKPDINDVPMEE  SQDNDH VRQDLNESTLDLSLNLNAL+D GE +
Subjt:  RASKKHGHIAVLEEQKNEAAENEAADKVEDEANKSNDVEPGSAVASSKGELQDEKPDINDVPMEESQSQDNDHAVRQDLNESTLDLSLNLNALNDDGEAA

Query:  SKADHIRDGKRKG
        SKADHIRDGKRKG
Subjt:  SKADHIRDGKRKG

A0A6J1CLM1 uncharacterized protein LOC1110127361.5e-3582.3Show/hide
Query:  RASKKHGHIAVLEEQKNEAAENEAADKVEDEANKSNDVEPGSAVASSKGELQDEKPDINDVPMEESQSQDNDHAVRQDLNESTLDLSLNLNALNDDGEAA
        R   K+  IAVLEEQKNEAAENEA+DKVEDEANKS DVEP   +A++KGEL DEKPDINDVPMEE  SQDNDHAVRQDLNESTLDLSLNLNALNDDGE  
Subjt:  RASKKHGHIAVLEEQKNEAAENEAADKVEDEANKSNDVEPGSAVASSKGELQDEKPDINDVPMEESQSQDNDHAVRQDLNESTLDLSLNLNALNDDGEAA

Query:  SKADHIRDGKRKG
        SKADHIRDGKR+G
Subjt:  SKADHIRDGKRKG

A0A6J1EHR2 uncharacterized protein LOC1114326477.5e-4087.61Show/hide
Query:  RASKKHGHIAVLEEQKNEAAENEAADKVEDEANKSNDVEPGSAVASSKGELQDEKPDINDVPMEESQSQDNDHAVRQDLNESTLDLSLNLNALNDDGEAA
        R   K+  IAVLEEQKNEAAENE ADKVE EANKSNDVEPGSAVAS+KGELQDEKPDINDVPM+E  SQDNDH VRQDLNESTLDLSLNLNALNDDGEA 
Subjt:  RASKKHGHIAVLEEQKNEAAENEAADKVEDEANKSNDVEPGSAVASSKGELQDEKPDINDVPMEESQSQDNDHAVRQDLNESTLDLSLNLNALNDDGEAA

Query:  SKADHIRDGKRKG
        SKADHIRDGKRKG
Subjt:  SKADHIRDGKRKG

A0A6J1JX59 uncharacterized protein LOC1114904788.2e-3986.61Show/hide
Query:  RASKKHGHIAVLEEQKNEAAENEAADKVEDEANKSNDVEPGSAVASSKGELQDEKPDINDVPMEESQSQDNDHAVRQDLNESTLDLSLNLNALNDDGEAA
        R   K+  IAVLEEQKNEAAENEAADKVE EANKSNDVEPGSAVAS+KG+LQDEKP+INDVPM+E  SQDNDH VRQDLNESTLDLSLNLNALNDDGEA 
Subjt:  RASKKHGHIAVLEEQKNEAAENEAADKVEDEANKSNDVEPGSAVASSKGELQDEKPDINDVPMEESQSQDNDHAVRQDLNESTLDLSLNLNALNDDGEAA

Query:  SKADHIRDGKRK
        SKADHIRDGKRK
Subjt:  SKADHIRDGKRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G22320.1 unknown protein1.1e-1146.22Show/hide
Query:  KHGHIAVLEEQKNEAAENEAADKVE--DEANKSNDVEPGSAV---------ASSKGELQ-DEKPDINDVPMEESQ-------SQDNDHAVRQDLNESTLD
        K+  IAVLEEQK E  E E  DK+E  D+ ++ N VE    V         +  K E++ +EKPDINDVPME+ Q         D +  VRQDLNEST+D
Subjt:  KHGHIAVLEEQKNEAAENEAADKVE--DEANKSNDVEPGSAV---------ASSKGELQ-DEKPDINDVPMEESQ-------SQDNDHAVRQDLNESTLD

Query:  LSLNLNALNDDGEAASKAD
        L LNLNA + D E   K D
Subjt:  LSLNLNALNDDGEAASKAD

AT4G22320.2 unknown protein8.5e-1246.61Show/hide
Query:  KHGHIAVLEEQKNEAAENEAADKVE--DEANKSNDVEPGSAV---------ASSKGELQ-DEKPDINDVPMEESQ------SQDNDHAVRQDLNESTLDL
        K+  IAVLEEQK E  E E  DK+E  D+ ++ N VE    V         +  K E++ +EKPDINDVPME+ Q        D +  VRQDLNEST+DL
Subjt:  KHGHIAVLEEQKNEAAENEAADKVE--DEANKSNDVEPGSAV---------ASSKGELQ-DEKPDINDVPMEESQ------SQDNDHAVRQDLNESTLDL

Query:  SLNLNALNDDGEAASKAD
         LNLNA + D E   K D
Subjt:  SLNLNALNDDGEAASKAD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATTACCATTGAGCTATGCTTATGCTATTGTAAGTCCTATTGTTCATTTCCATCCAAAGGCTCCACAGGAAAGTTCTGACCATTTGGCATTTGCAACAAGAGGAAA
TCTTTGTCCGTGTAAGGCTCTTTGTAATGCTGTAAACAAATACTTTGTTAACACTGGTAATGATTGTAGCTTTGTAATGCCTTTAAAAAGGACATACCTTTCTAACGACA
TTGTTTATATGATTGGCAATGTCAGGGCATCTAAGAAGCATGGACACATTGCTGTGTTAGAGGAACAGAAAAACGAAGCTGCAGAAAATGAAGCTGCTGATAAAGTTGAA
GATGAGGCTAACAAATCAAATGATGTTGAACCAGGTAGTGCAGTGGCAAGTTCTAAGGGTGAGCTTCAAGACGAGAAACCAGATATTAATGATGTGCCAATGGAAGAAAG
TCAGTCTCAGGACAACGATCATGCAGTACGCCAAGATTTGAACGAAAGTACTTTGGATTTAAGTCTGAACTTGAATGCTCTCAACGATGATGGTGAAGCTGCCTCAAAAG
CTGATCATATTAGAGATGGCAAGAGGAAGGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAATTACCATTGAGCTATGCTTATGCTATTGTAAGTCCTATTGTTCATTTCCATCCAAAGGCTCCACAGGAAAGTTCTGACCATTTGGCATTTGCAACAAGAGGAAA
TCTTTGTCCGTGTAAGGCTCTTTGTAATGCTGTAAACAAATACTTTGTTAACACTGGTAATGATTGTAGCTTTGTAATGCCTTTAAAAAGGACATACCTTTCTAACGACA
TTGTTTATATGATTGGCAATGTCAGGGCATCTAAGAAGCATGGACACATTGCTGTGTTAGAGGAACAGAAAAACGAAGCTGCAGAAAATGAAGCTGCTGATAAAGTTGAA
GATGAGGCTAACAAATCAAATGATGTTGAACCAGGTAGTGCAGTGGCAAGTTCTAAGGGTGAGCTTCAAGACGAGAAACCAGATATTAATGATGTGCCAATGGAAGAAAG
TCAGTCTCAGGACAACGATCATGCAGTACGCCAAGATTTGAACGAAAGTACTTTGGATTTAAGTCTGAACTTGAATGCTCTCAACGATGATGGTGAAGCTGCCTCAAAAG
CTGATCATATTAGAGATGGCAAGAGGAAGGGCTAA
Protein sequenceShow/hide protein sequence
MQLPLSYAYAIVSPIVHFHPKAPQESSDHLAFATRGNLCPCKALCNAVNKYFVNTGNDCSFVMPLKRTYLSNDIVYMIGNVRASKKHGHIAVLEEQKNEAAENEAADKVE
DEANKSNDVEPGSAVASSKGELQDEKPDINDVPMEESQSQDNDHAVRQDLNESTLDLSLNLNALNDDGEAASKADHIRDGKRKG