CuGenDBv2

Gene ID	Spg019723
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	nuclear speckle splicing regulatory protein 1-like
Genome location	scaffold5:30241063..30248102
RNA-Seq Expression	Spg019723
Synteny	Spg019723
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022142663.1 nuclear speckle splicing regulatory protein 1-like [Momordica charantia]

3.6e-52

78.48

Show/hide

Query:  VTKKSDISDFYFNLQKNIAYGAANAVKPREPPKKLQPEKQEKQTEVPKLEKHEESANADAFDNQQSLKYSNLPSQSAKTLEEHSHLEEEDLSVSNKTTPS
        VTKKSDISDFYFNLQKNIA+GA NAVK REPPK+LQ E+QEK +EV +LEKHEESANAD  +N QS K SNLPSQSAK +EEH    EED  VSNKTTPS
Subjt:  VTKKSDISDFYFNLQKNIAYGAANAVKPREPPKKLQPEKQEKQTEVPKLEKHEESANADAFDNQQSLKYSNLPSQSAKTLEEHSHLEEEDLSVSNKTTPS

Query:  DVLRGTSPPSLHDKTSVEEQPKQDEGEQQPKRDHHKRSEDAVAAAKERFLARKRAKEV
        DV    SPPSLHDKTSV+EQPK  +GEQQPKRDHHKRSEDAV AAKERFLARKRAK+V
Subjt:  DVLRGTSPPSLHDKTSVEEQPKQDEGEQQPKRDHHKRSEDAVAAAKERFLARKRAKEV

XP_022927406.1 nuclear speckle splicing regulatory protein 1-like [Cucurbita moschata]

4.0e-51

77.22

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Query:  VTKKSDISDFYFNLQKNIAYGAANAVKPREPPKKLQPEKQEKQTEVPKLEKHEESANADAFDNQQSLKYSNLPSQSAKTLEEHSHLEEEDLSVSNKTTPS
        VTKKSDISDFYFNLQKNIAYGA NAV+PREPP+KLQ    EKQ EV KL+KHEESANAD  ++ QS KY + PSQSAKT+E+  HLEE  LS SNKTTPS
Subjt:  VTKKSDISDFYFNLQKNIAYGAANAVKPREPPKKLQPEKQEKQTEVPKLEKHEESANADAFDNQQSLKYSNLPSQSAKTLEEHSHLEEEDLSVSNKTTPS

Query:  DVLRGTSPPSLHDKTSVEEQPKQDEGEQQPKRDHHKRSEDAVAAAKERFLARKRAKEV
        DV RGTSPP LH++T VE+QP+ D+GEQQPKRDHHKRSEDAVAAAKERFLARKR KEV
Subjt:  DVLRGTSPPSLHDKTSVEEQPKQDEGEQQPKRDHHKRSEDAVAAAKERFLARKRAKEV

XP_022973152.1 nuclear speckle splicing regulatory protein 1-like [Cucurbita maxima]

4.4e-50

75.95

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Query:  VTKKSDISDFYFNLQKNIAYGAANAVKPREPPKKLQPEKQEKQTEVPKLEKHEESANADAFDNQQSLKYSNLPSQSAKTLEEHSHLEEEDLSVSNKTTPS
        VTKKSDISDFYFNLQKNIAYGA NAV+PREPP+KLQ    EKQ +V K++KH ESANAD  ++ QS KY + PSQSAKT+E+  HLEE  LS SNKTTPS
Subjt:  VTKKSDISDFYFNLQKNIAYGAANAVKPREPPKKLQPEKQEKQTEVPKLEKHEESANADAFDNQQSLKYSNLPSQSAKTLEEHSHLEEEDLSVSNKTTPS

Query:  DVLRGTSPPSLHDKTSVEEQPKQDEGEQQPKRDHHKRSEDAVAAAKERFLARKRAKEV
        DV RGTSPP LH+KT VE+QP+ D+GEQQPKRDHHKRSEDAVAAAKERFLARKR KEV
Subjt:  DVLRGTSPPSLHDKTSVEEQPKQDEGEQQPKRDHHKRSEDAVAAAKERFLARKRAKEV

XP_023520694.1 nuclear speckle splicing regulatory protein 1-like [Cucurbita pepo subsp. pepo]

5.2e-51

77.22

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Query:  VTKKSDISDFYFNLQKNIAYGAANAVKPREPPKKLQPEKQEKQTEVPKLEKHEESANADAFDNQQSLKYSNLPSQSAKTLEEHSHLEEEDLSVSNKTTPS
        VTKKSDISDFYFNLQKNIAYGA NAV+PREPP+KLQ    EKQ EV KL+KHEES NAD  ++ QS KY + PSQSAKT+E+  HLEE  LS SNKTTPS
Subjt:  VTKKSDISDFYFNLQKNIAYGAANAVKPREPPKKLQPEKQEKQTEVPKLEKHEESANADAFDNQQSLKYSNLPSQSAKTLEEHSHLEEEDLSVSNKTTPS

Query:  DVLRGTSPPSLHDKTSVEEQPKQDEGEQQPKRDHHKRSEDAVAAAKERFLARKRAKEV
        DV RGTSPP LH+KT VE+QP+ D+GEQQPKRDHHKRSEDAVAAAKERFLARKR KEV
Subjt:  DVLRGTSPPSLHDKTSVEEQPKQDEGEQQPKRDHHKRSEDAVAAAKERFLARKRAKEV

XP_038877232.1 nuclear speckle splicing regulatory protein 1-like [Benincasa hispida]

2.5e-53

79.62

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Query:  VTKKSDISDFYFNLQKNIAYGAANAVKPREPPKKLQPEKQEKQTEVPKLEKHEESANADAFDNQQSLKYSNLPSQSAKTLEEHSHLEEEDLSVSNKTTPS
        VTKKSDI+DFYFNLQKNIAYGA NA++PREPP KL  EKQEKQTEV   EKHEE ANAD F++ QSLKYSNLPSQSAKT EEH  LEE  LSVSNKTTPS
Subjt:  VTKKSDISDFYFNLQKNIAYGAANAVKPREPPKKLQPEKQEKQTEVPKLEKHEESANADAFDNQQSLKYSNLPSQSAKTLEEHSHLEEEDLSVSNKTTPS

Query:  DVLRGTSPPSLHDKTSVEEQPKQDEGEQQPKRDHHKRSEDAVAAAKERFLARKRAKE
        DV RG SP ++ +KT VEEQPK ++GEQQPKRDHHKR+EDAVAAAKERFLARKRAKE
Subjt:  DVLRGTSPPSLHDKTSVEEQPKQDEGEQQPKRDHHKRSEDAVAAAKERFLARKRAKE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJE9 DUF2040 domain-containing protein

4.5e-48

72.78

Show/hide

Query:  VTKKSDISDFYFNLQKNIAYGAANAVKPREPPKKLQPEKQEKQTEVPKLEKHEESANADAFDNQQSLKYSNLPSQSAKTLEEHSHLEEEDLSVSNKTTPS
        VTKKSD+SDFYF+LQKN+AYGA NA++P  PPKKLQ EK+EKQTEV  LEKHEES N D F N   L+ SNLPS S KT+EEH HLEE  L  SNKTTPS
Subjt:  VTKKSDISDFYFNLQKNIAYGAANAVKPREPPKKLQPEKQEKQTEVPKLEKHEESANADAFDNQQSLKYSNLPSQSAKTLEEHSHLEEEDLSVSNKTTPS

Query:  DVLRGTSPPSLHDKTSVEEQPKQDEGEQQPKRDHHKRSEDAVAAAKERFLARKRAKEV
        ++  GTSPP+LHDKT V+EQPK ++ EQ PK DHHKR+EDAVAAAKERFLARKRAKEV
Subjt:  DVLRGTSPPSLHDKTSVEEQPKQDEGEQQPKRDHHKRSEDAVAAAKERFLARKRAKEV

A0A1S4E1R3 nuclear speckle splicing regulatory protein 1-like isoform X2

1.6e-45

70.25

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Query:  VTKKSDISDFYFNLQKNIAYGAANAVKPREPPKKLQPEKQEKQTEVPKLEKHEESANADAFDNQQSLKYSNLPSQSAKTLEEHSHLEEEDLSVSNKTTPS
        VTKKSD+SDFYF+LQKN+AYGA NA++PR  PKKLQ EK+EKQTEV  LEKHEES N D F++ Q         Q++KT+EEHSHLEE  LS SNKTTPS
Subjt:  VTKKSDISDFYFNLQKNIAYGAANAVKPREPPKKLQPEKQEKQTEVPKLEKHEESANADAFDNQQSLKYSNLPSQSAKTLEEHSHLEEEDLSVSNKTTPS

Query:  DVLRGTSPPSLHDKTSVEEQPKQDEGEQQPKRDHHKRSEDAVAAAKERFLARKRAKEV
        D+  GTSPP+LHDK  V+E+PK +  EQ PKRDHHKR+EDAVAAAKERFLARKRAKEV
Subjt:  DVLRGTSPPSLHDKTSVEEQPKQDEGEQQPKRDHHKRSEDAVAAAKERFLARKRAKEV

A0A6J1CNT9 nuclear speckle splicing regulatory protein 1-like

1.7e-52

78.48

Show/hide

Query:  VTKKSDISDFYFNLQKNIAYGAANAVKPREPPKKLQPEKQEKQTEVPKLEKHEESANADAFDNQQSLKYSNLPSQSAKTLEEHSHLEEEDLSVSNKTTPS
        VTKKSDISDFYFNLQKNIA+GA NAVK REPPK+LQ E+QEK +EV +LEKHEESANAD  +N QS K SNLPSQSAK +EEH    EED  VSNKTTPS
Subjt:  VTKKSDISDFYFNLQKNIAYGAANAVKPREPPKKLQPEKQEKQTEVPKLEKHEESANADAFDNQQSLKYSNLPSQSAKTLEEHSHLEEEDLSVSNKTTPS

Query:  DVLRGTSPPSLHDKTSVEEQPKQDEGEQQPKRDHHKRSEDAVAAAKERFLARKRAKEV
        DV    SPPSLHDKTSV+EQPK  +GEQQPKRDHHKRSEDAV AAKERFLARKRAK+V
Subjt:  DVLRGTSPPSLHDKTSVEEQPKQDEGEQQPKRDHHKRSEDAVAAAKERFLARKRAKEV

A0A6J1EHK7 nuclear speckle splicing regulatory protein 1-like

1.9e-51

77.22

Show/hide

Query:  VTKKSDISDFYFNLQKNIAYGAANAVKPREPPKKLQPEKQEKQTEVPKLEKHEESANADAFDNQQSLKYSNLPSQSAKTLEEHSHLEEEDLSVSNKTTPS
        VTKKSDISDFYFNLQKNIAYGA NAV+PREPP+KLQ    EKQ EV KL+KHEESANAD  ++ QS KY + PSQSAKT+E+  HLEE  LS SNKTTPS
Subjt:  VTKKSDISDFYFNLQKNIAYGAANAVKPREPPKKLQPEKQEKQTEVPKLEKHEESANADAFDNQQSLKYSNLPSQSAKTLEEHSHLEEEDLSVSNKTTPS

Query:  DVLRGTSPPSLHDKTSVEEQPKQDEGEQQPKRDHHKRSEDAVAAAKERFLARKRAKEV
        DV RGTSPP LH++T VE+QP+ D+GEQQPKRDHHKRSEDAVAAAKERFLARKR KEV
Subjt:  DVLRGTSPPSLHDKTSVEEQPKQDEGEQQPKRDHHKRSEDAVAAAKERFLARKRAKEV

A0A6J1I6R6 nuclear speckle splicing regulatory protein 1-like

2.1e-50

75.95

Show/hide

Query:  VTKKSDISDFYFNLQKNIAYGAANAVKPREPPKKLQPEKQEKQTEVPKLEKHEESANADAFDNQQSLKYSNLPSQSAKTLEEHSHLEEEDLSVSNKTTPS
        VTKKSDISDFYFNLQKNIAYGA NAV+PREPP+KLQ    EKQ +V K++KH ESANAD  ++ QS KY + PSQSAKT+E+  HLEE  LS SNKTTPS
Subjt:  VTKKSDISDFYFNLQKNIAYGAANAVKPREPPKKLQPEKQEKQTEVPKLEKHEESANADAFDNQQSLKYSNLPSQSAKTLEEHSHLEEEDLSVSNKTTPS

Query:  DVLRGTSPPSLHDKTSVEEQPKQDEGEQQPKRDHHKRSEDAVAAAKERFLARKRAKEV
        DV RGTSPP LH+KT VE+QP+ D+GEQQPKRDHHKRSEDAVAAAKERFLARKR KEV
Subjt:  DVLRGTSPPSLHDKTSVEEQPKQDEGEQQPKRDHHKRSEDAVAAAKERFLARKRAKEV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G55928.1 Coiled-coil domain-containing protein 55 (DUF2040)

3.0e-04

33.65

Show/hide

Query:  VTKKSDISDFYFNLQKNIAYGAANAVKPREPPKKLQPEKQEKQTEVPKLEKHEESANADAFDNQQSLKYSNLPS--QSAKTLEEHSHLEEEDLSVSNKTT
        VTKK D+SDFYFN+ KN+A+GA + +K RE       E+ ++Q +VPKLE+  E    ++ +        ++ S  +    L+E  H+  E+   S+ T 
Subjt:  VTKKSDISDFYFNLQKNIAYGAANAVKPREPPKKLQPEKQEKQTEVPKLEKHEESANADAFDNQQSLKYSNLPS--QSAKTLEEHSHLEEEDLSVSNKTT

Query:  PSDV
          D+
Subjt:  PSDV

AT2G27285.1 Coiled-coil domain-containing protein 55 (DUF2040)

1.1e-09

39.63

Show/hide

Query:  VTKKSDISDFYFNLQKNIAYGAANAVKPREPPKKLQPEKQEKQTEVPKLEKHEE--------SANADAFDNQQSLKYSNLPSQSAKTLEEHSHLEEEDLS
        VTKK D+SDFYFN+ KN+A+G A  V+ +E  K  +  K EK  E  K EK EE             + + + S       S  +K+LE    LE E  +
Subjt:  VTKKSDISDFYFNLQKNIAYGAANAVKPREPPKKLQPEKQEKQTEVPKLEKHEE--------SANADAFDNQQSLKYSNLPSQSAKTLEEHSHLEEEDLS

Query:  VSNKTTPSDVLRGTSPPSLHDKTSVEEQPKQDEGEQQPKRDHHKRSEDAVAAAKERFLARKRAK
        VS K   SD   GT       K + +E PK    +        KR EDA+AAAKERFLARK+AK
Subjt:  VSNKTTPSDVLRGTSPPSLHDKTSVEEQPKQDEGEQQPKRDHHKRSEDAVAAAKERFLARKRAK

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAAACCTATGGCTTGTGGTACAAAGGTTATTGTCAGCAAGTTTTGCATGGTAGGGTTAATACCCGAGATTCGATCTCAGCTAGAGGGTTCTCTTTGGTTGGTCCGTTC
TGTTGTATCCTTTAGGGAGGCTGAGGATCTGGATCACCTGCTTTGGAGTTGTGAGTTTGCTTGGGCTGTGTGGAGCTGCTTCTTTCAGGAGTTTGACTTTAACTTTGTTA
GAGCTCAGGCTTTTATGGTGGCGTTCGAGGAGCTCCTTTATTCGCCCTTTCGTGAGAGAGGGTGCTTTTTGTGGCAGCTTGGGGTTACCAAGAAGAGCGACATTAGCGAC
TTTTACTTCAACCTTCAAAAGAATATTGCCTATGGTGCCGCAAATGCAGTCAAGCCAAGGGAACCTCCGAAGAAGCTTCAGCCAGAGAAGCAAGAGAAGCAGACTGAAGT
CCCGAAATTGGAGAAGCATGAAGAGAGTGCTAATGCTGATGCCTTTGATAACCAACAGTCGTTGAAATACTCCAATTTACCTTCCCAGTCAGCCAAGACGTTAGAAGAGC
ATTCTCATCTTGAAGAAGAAGACCTTTCAGTTTCAAACAAAACAACACCATCTGATGTACTGCGAGGTACTAGCCCCCCTTCATTACATGATAAAACTTCAGTTGAGGAA
CAACCCAAGCAGGACGAAGGTGAACAACAACCAAAGCGCGACCATCATAAAAGAAGTGAAGATGCTGTTGCTGCTGCTAAAGAGCGCTTTTTGGCTCGAAAAAGAGCAAA
GGAGGTGTGA

mRNA sequence

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Protein sequence

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MKPMACGTKVIVSKFCMVGLIPEIRSQLEGSLWLVRSVVSFREAEDLDHLLWSCEFAWAVWSCFFQEFDFNFVRAQAFMVAFEELLYSPFRERGCFLWQLGVTKKSDISD
FYFNLQKNIAYGAANAVKPREPPKKLQPEKQEKQTEVPKLEKHEESANADAFDNQQSLKYSNLPSQSAKTLEEHSHLEEEDLSVSNKTTPSDVLRGTSPPSLHDKTSVEE
QPKQDEGEQQPKRDHHKRSEDAVAAAKERFLARKRAKEV

Spg019723 (gene) of Sponge gourd (cylindrica) v1 genome