; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg019730 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019730
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationscaffold5:30565279..30566214
RNA-Seq ExpressionSpg019730
SyntenySpg019730
Gene Ontology termsGO:0009451 - RNA modification (biological process)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583697.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]9.4e-15690.23Show/hide
Query:  MPKPQDIIPFYAALLAACSSTKNLHTLKQIHALSIRLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQM
        MPKPQDIIPFYAALL ACSSTKN  TLKQIHAL+IRL IS +DFIRTKL STYAAC  L QATTIF+FATRRPTFLFNALIRAHSSLRLFSQSLSIFR M
Subjt:  MPKPQDIIPFYAALLAACSSTKNLHTLKQIHALSIRLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQM

Query:  LVSGKPIDRHTLPAVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFER
        L+SGKPIDRHTLP V+KSCTGLSSLRLGRQVHGAVVINGF+ D PN NALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMF EVFGLFER
Subjt:  LVSGKPIDRHTLPAVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFER

Query:  MVEEGQKPDELTFTTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRV
        MVEEGQKPDELTFT LLTACSHGGL+ERGKEYFGMM M FDL PGLEHYTCMVD+LGRVGQVEEAEKLIMEME+EPDEALWGALLSACRIHGKAEVADRV
Subjt:  MVEEGQKPDELTFTTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRV

Query:  QERFIKE
        Q RFIK+
Subjt:  QERFIKE

KAG7019344.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-15589.9Show/hide
Query:  MPKPQDIIPFYAALLAACSSTKNLHTLKQIHALSIRLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQM
        MPKPQDIIPFYAALL ACSSTKN  TLKQIHAL+IRL IS +DFIRTKL STYAAC  L QATTIF+FATRRPTFLFNALIRAHSSLRLFSQSLSIFR M
Subjt:  MPKPQDIIPFYAALLAACSSTKNLHTLKQIHALSIRLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQM

Query:  LVSGKPIDRHTLPAVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFER
        L+SGKPIDRHTLP V+KSCTGLSSLRLGRQVHGAVVINGF+ D PN NALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMF EVFGLFER
Subjt:  LVSGKPIDRHTLPAVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFER

Query:  MVEEGQKPDELTFTTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRV
        MVEEGQKPDELTFT LLTACSHGGL+ERGKEYFGMM M FDL PGLEHYTCMVD+LGRVGQVEEAEKLIMEME+EPDEALWGALLSACRIHGKAEVADRV
Subjt:  MVEEGQKPDELTFTTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRV

Query:  QERFIKE
        Q RF+K+
Subjt:  QERFIKE

XP_022927399.1 pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucurbita moschata]4.7e-15589.58Show/hide
Query:  MPKPQDIIPFYAALLAACSSTKNLHTLKQIHALSIRLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQM
        MPKPQDIIPFYAALL ACSSTKN  TLKQIHAL+IRL IS +DFIRTKL STYAAC  L QATTIF+FATRRPTFLFNALIRAHSSLRLFSQSLSIFR+M
Subjt:  MPKPQDIIPFYAALLAACSSTKNLHTLKQIHALSIRLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQM

Query:  LVSGKPIDRHTLPAVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFER
        L+SGKPIDRHTLP V+KSCTGLSSLRLGRQVHGAVVINGF+ D PN NALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMF EVFGLFER
Subjt:  LVSGKPIDRHTLPAVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFER

Query:  MVEEGQKPDELTFTTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRV
        MVEEGQKPDELTFT LLTACSHGGL+ERGKEYFGMM+M FDL PGLEHYTCMVD+LGRVGQVEEAEKLIMEME+EPDEALWGALLSACRIHGK EVADRV
Subjt:  MVEEGQKPDELTFTTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRV

Query:  QERFIKE
        Q RF+K+
Subjt:  QERFIKE

XP_022973156.1 pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucurbita maxima]1.4e-15489.32Show/hide
Query:  MPKPQDIIPFYAALLAACSSTKNLHTLKQIHALSIRLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQM
        MPKPQDIIPFYAALL ACSSTKN HTLKQIHAL+IRL IS +DFIRTKL STYAAC  L QATTIF+FATRRPTFLFNALIRAHSSLRLFSQSLSIFR M
Subjt:  MPKPQDIIPFYAALLAACSSTKNLHTLKQIHALSIRLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQM

Query:  LVSGKPIDRHTLPAVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFER
        L+SGKPIDRHTLP VLKSCTGLSSLRLGRQVHG VVINGF+ D PN NALITMYGKCGDLG+ARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFER
Subjt:  LVSGKPIDRHTLPAVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFER

Query:  MVEEGQKPDELTFTTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLI--MEMEVEPDEALWGALLSACRIHGKAEVAD
        MVEEGQKPDELTFT LLTACSHGGL+ERGKEYFGMM+M F+L PGLEHYTCMVD+LGRVGQVEEAEKLI  MEME+EPDEALWGALLSACRIHGKAEVAD
Subjt:  MVEEGQKPDELTFTTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLI--MEMEVEPDEALWGALLSACRIHGKAEVAD

Query:  RVQERFIKE
        RVQ RF+K+
Subjt:  RVQERFIKE

XP_023520705.1 pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucurbita pepo subsp. pepo]1.9e-15690.55Show/hide
Query:  MPKPQDIIPFYAALLAACSSTKNLHTLKQIHALSIRLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQM
        MPKPQDIIPFYAALL ACSSTKN  TLKQIHAL+IRL IS +DFIRTKL STYAAC  L QATTIF+FATRRPTFLFNALIRAHSSLRLFSQSLSIFR M
Subjt:  MPKPQDIIPFYAALLAACSSTKNLHTLKQIHALSIRLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQM

Query:  LVSGKPIDRHTLPAVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFER
        LVSGKPIDRHTLP VLKSCTGLSSLRLGRQVHGAVVINGF+ D PN NALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFER
Subjt:  LVSGKPIDRHTLPAVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFER

Query:  MVEEGQKPDELTFTTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRV
        MVEEGQKPDELTFT LLTACSHGGL+ERGKEYFGMM+M FDL PGLEHYTCMVD+LGRVGQVEEAEKLIMEME+EPDEALWGALL ACRIHGKAEVADRV
Subjt:  MVEEGQKPDELTFTTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRV

Query:  QERFIKE
        Q RF+K+
Subjt:  QERFIKE

TrEMBL top hitse value%identityAlignment
A0A0A0K1F7 Uncharacterized protein1.8e-15286.97Show/hide
Query:  MPKPQDIIPFYAALLAACSSTKNLHTLKQIHALSIRLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQM
        MPKP +IIPFYAALL ACSST NLHTLKQIHAL+I LHIS + FIRTKL STYAACAQL QATTIF+FATRRPT+LFN LIRAHSSLRLFSQSLSIFR M
Subjt:  MPKPQDIIPFYAALLAACSSTKNLHTLKQIHALSIRLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQM

Query:  LVSGKPIDRHTLPAVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFER
        L+SGK IDRHTLP VLKSCTGLSSLRLGRQVHGA++INGF+ D P+ NALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVF LFER
Subjt:  LVSGKPIDRHTLPAVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFER

Query:  MVEEGQKPDELTFTTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRV
        MVEEGQKPDELTFT+LLTACSHGGL+E+GKEYFGMMRMEF L PGL+HYTCMVD+LGR GQVEEAEKLIMEME+EPDEALWGA+LSACRIHGK +VADRV
Subjt:  MVEEGQKPDELTFTTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRV

Query:  QERFIKE
        Q+RFIK+
Subjt:  QERFIKE

A0A5A7UT42 Pentatricopeptide repeat-containing protein1.2e-14884.69Show/hide
Query:  MPKPQDIIPFYAALLAACSSTKNLHTLKQIHALSIRLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQM
        MPKP +IIPFYAALL ACSSTKNLHTLKQIHAL+I LHIS + FIRTKL STYAACAQL QA TIF+FATRRPT+LFNALIRAHSSLRLFSQSLSIFR M
Subjt:  MPKPQDIIPFYAALLAACSSTKNLHTLKQIHALSIRLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQM

Query:  LVSGKPIDRHTLPAVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFER
        L+SGK  DRHT P VLKSCTGLSSLRLGRQVHGA++INGF+ D P+ NALITMY KCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVF LFER
Subjt:  LVSGKPIDRHTLPAVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFER

Query:  MVEEGQKPDELTFTTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRV
        MV+EGQ+PDELTFT+LLTACSHGGL+E+GKEYF  MRMEF L PGL+HYTCMVD+LGR+GQVEEAEKLIMEME+EPDEALWGA+LSACRIHG+ +VADRV
Subjt:  MVEEGQKPDELTFTTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRV

Query:  QERFIKE
        Q+RFIK+
Subjt:  QERFIKE

A0A6J1CNN2 pentatricopeptide repeat-containing protein At1g06140, mitochondrial-like8.0e-15388.27Show/hide
Query:  MPKPQDIIPFYAALLAACSSTKNLHTLKQIHALSIRLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQM
        MP  Q  +PFYAALL ACSSTKNLH+L+QIHAL+IRL IS +DFIRTKLVS+YAACAQL+QAT IF+FATRRPTFLFN LIRAHSSLRLF QSLSIFR+M
Subjt:  MPKPQDIIPFYAALLAACSSTKNLHTLKQIHALSIRLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQM

Query:  LVSGKPIDRHTLPAVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFER
        L+SGKPIDRHTLP VLKSCTGLSSLRLGRQVHG VVINGF+VD PNSNALITMYGKCGDLGVARKVFD MPERNEVSWSALMAGYGVHG FGEVFGLFER
Subjt:  LVSGKPIDRHTLPAVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFER

Query:  MVEEGQKPDELTFTTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRV
        MVE+GQKPD LTFT LLTACSHGGLVERGKEYFGMMRM FDL PGLEHYTCMVDMLGR GQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADR+
Subjt:  MVEEGQKPDELTFTTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRV

Query:  QERFIKE
        Q+RFI++
Subjt:  QERFIKE

A0A6J1EHW3 pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like2.3e-15589.58Show/hide
Query:  MPKPQDIIPFYAALLAACSSTKNLHTLKQIHALSIRLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQM
        MPKPQDIIPFYAALL ACSSTKN  TLKQIHAL+IRL IS +DFIRTKL STYAAC  L QATTIF+FATRRPTFLFNALIRAHSSLRLFSQSLSIFR+M
Subjt:  MPKPQDIIPFYAALLAACSSTKNLHTLKQIHALSIRLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQM

Query:  LVSGKPIDRHTLPAVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFER
        L+SGKPIDRHTLP V+KSCTGLSSLRLGRQVHGAVVINGF+ D PN NALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMF EVFGLFER
Subjt:  LVSGKPIDRHTLPAVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFER

Query:  MVEEGQKPDELTFTTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRV
        MVEEGQKPDELTFT LLTACSHGGL+ERGKEYFGMM+M FDL PGLEHYTCMVD+LGRVGQVEEAEKLIMEME+EPDEALWGALLSACRIHGK EVADRV
Subjt:  MVEEGQKPDELTFTTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRV

Query:  QERFIKE
        Q RF+K+
Subjt:  QERFIKE

A0A6J1I7X0 pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like6.6e-15589.32Show/hide
Query:  MPKPQDIIPFYAALLAACSSTKNLHTLKQIHALSIRLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQM
        MPKPQDIIPFYAALL ACSSTKN HTLKQIHAL+IRL IS +DFIRTKL STYAAC  L QATTIF+FATRRPTFLFNALIRAHSSLRLFSQSLSIFR M
Subjt:  MPKPQDIIPFYAALLAACSSTKNLHTLKQIHALSIRLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQM

Query:  LVSGKPIDRHTLPAVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFER
        L+SGKPIDRHTLP VLKSCTGLSSLRLGRQVHG VVINGF+ D PN NALITMYGKCGDLG+ARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFER
Subjt:  LVSGKPIDRHTLPAVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFER

Query:  MVEEGQKPDELTFTTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLI--MEMEVEPDEALWGALLSACRIHGKAEVAD
        MVEEGQKPDELTFT LLTACSHGGL+ERGKEYFGMM+M F+L PGLEHYTCMVD+LGRVGQVEEAEKLI  MEME+EPDEALWGALLSACRIHGKAEVAD
Subjt:  MVEEGQKPDELTFTTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLI--MEMEVEPDEALWGALLSACRIHGKAEVAD

Query:  RVQERFIKE
        RVQ RF+K+
Subjt:  RVQERFIKE

SwissProt top hitse value%identityAlignment
P93005 Pentatricopeptide repeat-containing protein At2g336801.4e-5338.01Show/hide
Query:  LLAACSSTKNLHTLKQIHALSIRLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQMLVSGKPIDRHTLP
        +L ACS    L   KQ+H+  ++L    + F  T LV  YA    L  A   F     R   L+ +LI  +       ++L ++R+M  +G   +  T+ 
Subjt:  LLAACSSTKNLHTLKQIHALSIRLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQMLVSGKPIDRHTLP

Query:  AVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFERMVEEGQKPDELTF
        +VLK+C+ L++L LG+QVHG  + +GF ++ P  +AL TMY KCG L     VF   P ++ VSW+A+++G   +G   E   LFE M+ EG +PD++TF
Subjt:  AVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFERMVEEGQKPDELTF

Query:  TTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRVQERFI
          +++ACSH G VERG  YF MM  +  L P ++HY CMVD+L R GQ++EA++ I    ++    LW  LLSAC+ HGK E+     E+ +
Subjt:  TTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRVQERFI

Q9LND4 Pentatricopeptide repeat-containing protein At1g06140, mitochondrial4.6e-5737.54Show/hide
Query:  LLAACSSTKNLHTLKQIHALSI-RLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQMLVSGKPIDRHTL
        L+ AC +       K +H +SI R  I  +D+++  ++  Y  C  L  A  +F  +  R   ++  LI   +      ++  +FRQML      ++ TL
Subjt:  LLAACSSTKNLHTLKQIHALSI-RLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQMLVSGKPIDRHTL

Query:  PAVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFERMVEEGQKPDELT
         A+L SC+ L SLR G+ VHG ++ NG  +D  N  + I MY +CG++ +AR VFD MPERN +SWS+++  +G++G+F E    F +M  +   P+ +T
Subjt:  PAVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFERMVEEGQKPDELT

Query:  FTTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRVQERFI
        F +LL+ACSH G V+ G + F  M  ++ + P  EHY CMVD+LGR G++ EA+  I  M V+P  + WGALLSACRIH + ++A  + E+ +
Subjt:  FTTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRVQERFI

Q9S7F4 Putative pentatricopeptide repeat-containing protein At2g015101.1e-5336.86Show/hide
Query:  YAALLAACSSTKNLHTLKQIHALSIRLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQMLVSGKPIDRH
        +A +L+  ++  +L   +Q+H  ++     S   +   LV  YA C   ++A  IF    +R T  + ALI  +    L    L +F +M  S    D+ 
Subjt:  YAALLAACSSTKNLHTLKQIHALSIRLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQMLVSGKPIDRH

Query:  TLPAVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFERMVEEGQKPDE
        T   VLK+    +SL LG+Q+H  ++ +G   +  + + L+ MY KCG +  A +VF+ MP+RN VSW+AL++ +  +G      G F +M+E G +PD 
Subjt:  TLPAVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFERMVEEGQKPDE

Query:  LTFTTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRVQER
        ++   +LTACSH G VE+G EYF  M   + +TP  +HY CM+D+LGR G+  EAEKL+ EM  EPDE +W ++L+ACRIH    +A+R  E+
Subjt:  LTFTTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRVQER

Q9SN39 Pentatricopeptide repeat-containing protein DOT4, chloroplastic1.8e-5335.96Show/hide
Query:  ALLAACSSTKNLHTLKQIHALSIRLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQMLVSGK-PIDRHT
        A+L  C+  + L   K++H       +  + F+   L+  YA C  +Q+A  +F+    +    +N +I  +S     +++LS+F  +L   +   D  T
Subjt:  ALLAACSSTKNLHTLKQIHALSIRLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQMLVSGK-PIDRHT

Query:  LPAVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFERMVEEGQKPDEL
        +  VL +C  LS+   GR++HG ++ NG+  D   +N+L+ MY KCG L +A  +FD +  ++ VSW+ ++AGYG+HG   E   LF +M + G + DE+
Subjt:  LPAVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFERMVEEGQKPDEL

Query:  TFTTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRVQER
        +F +LL ACSH GLV+ G  +F +MR E  + P +EHY C+VDML R G + +A + I  M + PD  +WGALL  CRIH   ++A++V E+
Subjt:  TFTTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRVQER

Q9STF3 Pentatricopeptide repeat-containing protein At3g46790, chloroplastic9.7e-5537.79Show/hide
Query:  YAALLAACSSTK----NLHTLKQIHALSIRLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQMLVSGKP
        Y  +L AC +++    +L   K+IHA   R   SS+ +I T LV  YA    +  A+ +F     R    ++A+I  ++      ++L  FR+M+   K 
Subjt:  YAALLAACSSTK----NLHTLKQIHALSIRLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQMLVSGKP

Query:  IDRH--TLPAVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFERMVEE
           +  T+ +VL++C  L++L  G+ +HG ++  G     P  +AL+TMYG+CG L V ++VFD M +R+ VSW++L++ YGVHG   +   +FE M+  
Subjt:  IDRH--TLPAVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFERMVEE

Query:  GQKPDELTFTTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRVQER
        G  P  +TF ++L ACSH GLVE GK  F  M  +  + P +EHY CMVD+LGR  +++EA K++ +M  EP   +WG+LL +CRIHG  E+A+R   R
Subjt:  GQKPDELTFTTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRVQER

Arabidopsis top hitse value%identityAlignment
AT1G06140.1 Pentatricopeptide repeat (PPR) superfamily protein3.3e-5837.54Show/hide
Query:  LLAACSSTKNLHTLKQIHALSI-RLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQMLVSGKPIDRHTL
        L+ AC +       K +H +SI R  I  +D+++  ++  Y  C  L  A  +F  +  R   ++  LI   +      ++  +FRQML      ++ TL
Subjt:  LLAACSSTKNLHTLKQIHALSI-RLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQMLVSGKPIDRHTL

Query:  PAVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFERMVEEGQKPDELT
         A+L SC+ L SLR G+ VHG ++ NG  +D  N  + I MY +CG++ +AR VFD MPERN +SWS+++  +G++G+F E    F +M  +   P+ +T
Subjt:  PAVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFERMVEEGQKPDELT

Query:  FTTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRVQERFI
        F +LL+ACSH G V+ G + F  M  ++ + P  EHY CMVD+LGR G++ EA+  I  M V+P  + WGALLSACRIH + ++A  + E+ +
Subjt:  FTTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRVQERFI

AT2G33680.1 Tetratricopeptide repeat (TPR)-like superfamily protein9.9e-5538.01Show/hide
Query:  LLAACSSTKNLHTLKQIHALSIRLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQMLVSGKPIDRHTLP
        +L ACS    L   KQ+H+  ++L    + F  T LV  YA    L  A   F     R   L+ +LI  +       ++L ++R+M  +G   +  T+ 
Subjt:  LLAACSSTKNLHTLKQIHALSIRLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQMLVSGKPIDRHTLP

Query:  AVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFERMVEEGQKPDELTF
        +VLK+C+ L++L LG+QVHG  + +GF ++ P  +AL TMY KCG L     VF   P ++ VSW+A+++G   +G   E   LFE M+ EG +PD++TF
Subjt:  AVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFERMVEEGQKPDELTF

Query:  TTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRVQERFI
          +++ACSH G VERG  YF MM  +  L P ++HY CMVD+L R GQ++EA++ I    ++    LW  LLSAC+ HGK E+     E+ +
Subjt:  TTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRVQERFI

AT3G02010.1 Pentatricopeptide repeat (PPR) superfamily protein7.6e-5536.86Show/hide
Query:  YAALLAACSSTKNLHTLKQIHALSIRLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQMLVSGKPIDRH
        +A +L+  ++  +L   +Q+H  ++     S   +   LV  YA C   ++A  IF    +R T  + ALI  +    L    L +F +M  S    D+ 
Subjt:  YAALLAACSSTKNLHTLKQIHALSIRLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQMLVSGKPIDRH

Query:  TLPAVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFERMVEEGQKPDE
        T   VLK+    +SL LG+Q+H  ++ +G   +  + + L+ MY KCG +  A +VF+ MP+RN VSW+AL++ +  +G      G F +M+E G +PD 
Subjt:  TLPAVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFERMVEEGQKPDE

Query:  LTFTTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRVQER
        ++   +LTACSH G VE+G EYF  M   + +TP  +HY CM+D+LGR G+  EAEKL+ EM  EPDE +W ++L+ACRIH    +A+R  E+
Subjt:  LTFTTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRVQER

AT3G46790.1 Tetratricopeptide repeat (TPR)-like superfamily protein6.9e-5637.79Show/hide
Query:  YAALLAACSSTK----NLHTLKQIHALSIRLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQMLVSGKP
        Y  +L AC +++    +L   K+IHA   R   SS+ +I T LV  YA    +  A+ +F     R    ++A+I  ++      ++L  FR+M+   K 
Subjt:  YAALLAACSSTK----NLHTLKQIHALSIRLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQMLVSGKP

Query:  IDRH--TLPAVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFERMVEE
           +  T+ +VL++C  L++L  G+ +HG ++  G     P  +AL+TMYG+CG L V ++VFD M +R+ VSW++L++ YGVHG   +   +FE M+  
Subjt:  IDRH--TLPAVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFERMVEE

Query:  GQKPDELTFTTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRVQER
        G  P  +TF ++L ACSH GLVE GK  F  M  +  + P +EHY CMVD+LGR  +++EA K++ +M  EP   +WG+LL +CRIHG  E+A+R   R
Subjt:  GQKPDELTFTTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRVQER

AT4G18750.1 Pentatricopeptide repeat (PPR) superfamily protein1.3e-5435.96Show/hide
Query:  ALLAACSSTKNLHTLKQIHALSIRLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQMLVSGK-PIDRHT
        A+L  C+  + L   K++H       +  + F+   L+  YA C  +Q+A  +F+    +    +N +I  +S     +++LS+F  +L   +   D  T
Subjt:  ALLAACSSTKNLHTLKQIHALSIRLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQMLVSGK-PIDRHT

Query:  LPAVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFERMVEEGQKPDEL
        +  VL +C  LS+   GR++HG ++ NG+  D   +N+L+ MY KCG L +A  +FD +  ++ VSW+ ++AGYG+HG   E   LF +M + G + DE+
Subjt:  LPAVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFERMVEEGQKPDEL

Query:  TFTTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRVQER
        +F +LL ACSH GLV+ G  +F +MR E  + P +EHY C+VDML R G + +A + I  M + PD  +WGALL  CRIH   ++A++V E+
Subjt:  TFTTLLTACSHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRVQER


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCAAACCACAAGACATAATCCCCTTCTACGCCGCTCTCCTCGCAGCATGCTCCTCCACCAAGAACCTCCACACCCTCAAGCAAATCCACGCTCTATCCATAAGACT
CCACATCTCTTCCAACGATTTCATCCGAACCAAGCTCGTCTCCACCTACGCCGCCTGCGCCCAGCTGCAACAAGCGACCACCATCTTCACCTTCGCAACTCGCCGCCCGA
CGTTCCTCTTCAATGCGCTCATTAGAGCCCACTCCTCTCTCCGTCTCTTCTCTCAATCCCTTTCCATTTTCCGCCAGATGCTCGTTTCTGGAAAACCCATTGACCGTCAC
ACTTTGCCGGCGGTGCTCAAGTCATGTACTGGGCTATCTTCCTTACGCCTCGGCCGGCAGGTTCATGGGGCTGTTGTGATTAATGGGTTCGCTGTCGATTTTCCGAACTC
GAACGCGTTGATCACGATGTATGGCAAGTGCGGGGACTTGGGTGTTGCGCGGAAGGTGTTCGACGGAATGCCTGAGAGGAATGAAGTGTCGTGGTCGGCACTGATGGCGG
GTTATGGGGTGCATGGTATGTTTGGGGAGGTTTTTGGTTTGTTTGAGAGGATGGTGGAGGAGGGGCAAAAGCCGGACGAGCTCACTTTTACAACTCTTCTCACGGCGTGT
AGCCACGGAGGGTTGGTTGAGAGAGGGAAGGAGTATTTTGGTATGATGAGAATGGAGTTTGATTTGACGCCTGGGTTGGAACATTATACTTGCATGGTGGATATGCTGGG
AAGGGTGGGGCAAGTGGAAGAAGCAGAGAAGTTGATAATGGAGATGGAGGTTGAGCCTGATGAGGCCTTGTGGGGTGCTCTTTTGAGTGCCTGTAGGATTCATGGGAAGG
CCGAGGTGGCTGATAGGGTGCAAGAACGGTTTATCAAGGAAGACTTGAGTGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCCAAACCACAAGACATAATCCCCTTCTACGCCGCTCTCCTCGCAGCATGCTCCTCCACCAAGAACCTCCACACCCTCAAGCAAATCCACGCTCTATCCATAAGACT
CCACATCTCTTCCAACGATTTCATCCGAACCAAGCTCGTCTCCACCTACGCCGCCTGCGCCCAGCTGCAACAAGCGACCACCATCTTCACCTTCGCAACTCGCCGCCCGA
CGTTCCTCTTCAATGCGCTCATTAGAGCCCACTCCTCTCTCCGTCTCTTCTCTCAATCCCTTTCCATTTTCCGCCAGATGCTCGTTTCTGGAAAACCCATTGACCGTCAC
ACTTTGCCGGCGGTGCTCAAGTCATGTACTGGGCTATCTTCCTTACGCCTCGGCCGGCAGGTTCATGGGGCTGTTGTGATTAATGGGTTCGCTGTCGATTTTCCGAACTC
GAACGCGTTGATCACGATGTATGGCAAGTGCGGGGACTTGGGTGTTGCGCGGAAGGTGTTCGACGGAATGCCTGAGAGGAATGAAGTGTCGTGGTCGGCACTGATGGCGG
GTTATGGGGTGCATGGTATGTTTGGGGAGGTTTTTGGTTTGTTTGAGAGGATGGTGGAGGAGGGGCAAAAGCCGGACGAGCTCACTTTTACAACTCTTCTCACGGCGTGT
AGCCACGGAGGGTTGGTTGAGAGAGGGAAGGAGTATTTTGGTATGATGAGAATGGAGTTTGATTTGACGCCTGGGTTGGAACATTATACTTGCATGGTGGATATGCTGGG
AAGGGTGGGGCAAGTGGAAGAAGCAGAGAAGTTGATAATGGAGATGGAGGTTGAGCCTGATGAGGCCTTGTGGGGTGCTCTTTTGAGTGCCTGTAGGATTCATGGGAAGG
CCGAGGTGGCTGATAGGGTGCAAGAACGGTTTATCAAGGAAGACTTGAGTGTATAA
Protein sequenceShow/hide protein sequence
MPKPQDIIPFYAALLAACSSTKNLHTLKQIHALSIRLHISSNDFIRTKLVSTYAACAQLQQATTIFTFATRRPTFLFNALIRAHSSLRLFSQSLSIFRQMLVSGKPIDRH
TLPAVLKSCTGLSSLRLGRQVHGAVVINGFAVDFPNSNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFGLFERMVEEGQKPDELTFTTLLTAC
SHGGLVERGKEYFGMMRMEFDLTPGLEHYTCMVDMLGRVGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRVQERFIKEDLSV