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Spg019737 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019737
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGag/pol protein
Genome locationscaffold5:34544149..34548590
RNA-Seq ExpressionSpg019737
SyntenySpg019737
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7990634.1 hypothetical protein I3843_02G035100 [Carya illinoinensis]3.1e-0941.76Show/hide
Query:  LQRNKVVNLFPLDLEIDRTLRTIRREKRLAEAMAQQEA-PKAIRDFLQPVLPTENSGIVYAPIQATNFELKTGLIQMALDNSFKGHPYEDP
        ++R +  ++ P+D EI+RTLR++RR K LA A   +E  P+ ++D+++PV+    S I+  PI A NFELK  LI M     F G P +DP
Subjt:  LQRNKVVNLFPLDLEIDRTLRTIRREKRLAEAMAQQEA-PKAIRDFLQPVLPTENSGIVYAPIQATNFELKTGLIQMALDNSFKGHPYEDP

WP_217833153.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]1.5e-1151.81Show/hide
Query:  NLFPLDLEIDRTLRTIRREKRLAEAMAQQEAPKAIRDFLQPVLPTENSGIVYAPIQATNFELKTGLIQMALDNSFKGHPYEDP
        NL PLD EIDRT R   R          +E PKAIRD+ QP LP    GI+  PI   NFELK GLIQMA + +F+G   EDP
Subjt:  NLFPLDLEIDRTLRTIRREKRLAEAMAQQEAPKAIRDFLQPVLPTENSGIVYAPIQATNFELKTGLIQMALDNSFKGHPYEDP

XP_022883666.1 uncharacterized protein LOC111400483 [Olea europaea var. sylvestris]3.7e-0742.57Show/hide
Query:  LQRNKVVNLFPLDLEIDRT---LRTIRREKRLAEAMAQQEA--------PKAIRDFLQPVLPTENSGIVYAPIQATNFELKTGLIQMALDNSFKGHPYED
        ++R + ++L P+D E +RT   LR+I+R +R  EAM +Q+A         KAI D+++PV+    SGI    I A NFELK GLI M   N F G   ED
Subjt:  LQRNKVVNLFPLDLEIDRT---LRTIRREKRLAEAMAQQEA--------PKAIRDFLQPVLPTENSGIVYAPIQATNFELKTGLIQMALDNSFKGHPYED

Query:  P
        P
Subjt:  P

XP_031392315.1 uncharacterized protein LOC116204378 [Punica granatum]1.4e-0635.83Show/hide
Query:  ILGGSRSVQRDSKRQRRGLQRNKVVNLFPLDLEIDRTLRTIRREKRLAEAMAQ------------QEAPKAIRDFLQPVLPTENSGIVYAPIQATNFELK
        +L     +   S   R  ++R++   L PLD EI+RTL  +RRE R  E +              Q A +A+RD+  P +    S I    I A NFELK
Subjt:  ILGGSRSVQRDSKRQRRGLQRNKVVNLFPLDLEIDRTLRTIRREKRLAEAMAQ------------QEAPKAIRDFLQPVLPTENSGIVYAPIQATNFELK

Query:  TGLIQMALDNSFKGHPYEDP
          LIQM   N F G+P E P
Subjt:  TGLIQMALDNSFKGHPYEDP

XP_038906874.1 uncharacterized protein LOC120092758 [Benincasa hispida]6.4e-0741.86Show/hide
Query:  LQRNKVVNLFPLDLEIDRTLRTIRREKRLAEAMA--QQEAPKAIRDFLQPVLPTENSGIVYAPIQATNFELKTGLIQMALDNSFKG
        ++R +   L   D E +R L+ + R++R+   +   Q EA + IRD+ +PV+PT   GI   PI A+NFELK GLIQMA D  + G
Subjt:  LQRNKVVNLFPLDLEIDRTLRTIRREKRLAEAMA--QQEAPKAIRDFLQPVLPTENSGIVYAPIQATNFELKTGLIQMALDNSFKG

TrEMBL top hitse value%identityAlignment
A0A6P8CDK6 Reverse transcriptase9.0e-0739.05Show/hide
Query:  RRGLQRNKVVNLFPLDLEIDRTLRTIRREKRLAEAMAQ------------QEAPKAIRDFLQPVLPTENSGIVYAPIQATNFELKTGLIQMALDNSFKGH
        R  ++R++   L PLD EI+RTL  +RRE R  E +              Q A +A+RD+  P +    S I    I A NFELK  LIQM   N F G+
Subjt:  RRGLQRNKVVNLFPLDLEIDRTLRTIRREKRLAEAMAQ------------QEAPKAIRDFLQPVLPTENSGIVYAPIQATNFELKTGLIQMALDNSFKGH

Query:  PYEDP
        P E P
Subjt:  PYEDP

A0A6P8CTC3 uncharacterized protein LOC1161938992.0e-0639.22Show/hide
Query:  LQRNKVVNLFPLDLEIDRTLRTIRREKRLAEAMAQ------------QEAPKAIRDFLQPVLPTENSGIVYAPIQATNFELKTGLIQMALDNSFKGHPYE
        ++R++   L PLD EI+RTL  +RRE R  E +              Q A +A+RD+  P +    S I    I A NFELK  LIQM   N F G+P E
Subjt:  LQRNKVVNLFPLDLEIDRTLRTIRREKRLAEAMAQ------------QEAPKAIRDFLQPVLPTENSGIVYAPIQATNFELKTGLIQMALDNSFKGHPYE

Query:  DP
         P
Subjt:  DP

A0A6P8D6V7 uncharacterized protein LOC1162043786.9e-0735.83Show/hide
Query:  ILGGSRSVQRDSKRQRRGLQRNKVVNLFPLDLEIDRTLRTIRREKRLAEAMAQ------------QEAPKAIRDFLQPVLPTENSGIVYAPIQATNFELK
        +L     +   S   R  ++R++   L PLD EI+RTL  +RRE R  E +              Q A +A+RD+  P +    S I    I A NFELK
Subjt:  ILGGSRSVQRDSKRQRRGLQRNKVVNLFPLDLEIDRTLRTIRREKRLAEAMAQ------------QEAPKAIRDFLQPVLPTENSGIVYAPIQATNFELK

Query:  TGLIQMALDNSFKGHPYEDP
          LIQM   N F G+P E P
Subjt:  TGLIQMALDNSFKGHPYEDP

A0A6P8DAI3 uncharacterized protein LOC1162029732.0e-0639.22Show/hide
Query:  LQRNKVVNLFPLDLEIDRTLRTIRREKRLAEAMAQ------------QEAPKAIRDFLQPVLPTENSGIVYAPIQATNFELKTGLIQMALDNSFKGHPYE
        ++R++   L PLD EI+RTL  +RRE R  E +              Q A +A+RD+  P +    S I    I A NFELK  LIQM   N F G+P E
Subjt:  LQRNKVVNLFPLDLEIDRTLRTIRREKRLAEAMAQ------------QEAPKAIRDFLQPVLPTENSGIVYAPIQATNFELKTGLIQMALDNSFKGHPYE

Query:  DP
         P
Subjt:  DP

A0A6P8DKJ2 uncharacterized protein LOC1162042319.0e-0737.96Show/hide
Query:  KRQRRGLQRNKVVNLFPLDLEIDRTLRTIRREKRLAEAMAQ------------QEAPKAIRDFLQPVLPTENSGIVYAPIQATNFELKTGLIQMALDNSF
        +  R  ++R++   L PLD EI+RTL  +RRE R  E +              Q A +A+RD+  P +    S I    I A NFELK  LIQM   N F
Subjt:  KRQRRGLQRNKVVNLFPLDLEIDRTLRTIRREKRLAEAMAQ------------QEAPKAIRDFLQPVLPTENSGIVYAPIQATNFELKTGLIQMALDNSF

Query:  KGHPYEDP
         G+P E P
Subjt:  KGHPYEDP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGTCACAGCGTCGCGACGCTGTGCTGTATAGCGTCGCGACGCTACCCCCTTTCCGAGCCTATATAAGGCGCCCCTTGGTGCCTCATTTTACCATCAATCATCATAT
TCTTCCATTCCTTTCTTGCTTTCTTGGCTCCTTTGGGAGCCTCTCTCAAGGCTTCCAAGCCTTTTTGAGAGTTTCTTTAGTGGGAAACTTTTGGGGAATTTTGGAGAGCA
TTCTAGGAGGCTCAAGGAGTGTTCAGAGGGACTCCAAGCGTCAGCGAAGGGGTCTTCAACGCAACAAGGTGGTTAATTTGTTTCCGCTAGATCTCGAAATTGACAGGACT
CTTAGAACCATTCGTAGAGAAAAAAGATTAGCAGAAGCAATGGCCCAACAAGAAGCTCCCAAGGCGATCAGAGACTTTTTACAGCCAGTTCTCCCGACCGAAAATTCAGG
AATCGTTTACGCCCCAATACAAGCTACAAATTTTGAGTTAAAGACGGGATTGATTCAGATGGCACTCGATAATTCTTTTAAGGGACATCCTTATGAGGATCCTGTTGGGT
TTTATGCCCTAAAACTCGTAGATAGTGAATCATGGGTGAGAGTGGCCAATACGCCGACTCAATATGCCTTCCTTTTTGGGGACAAGACCGAGTGGGAGGCTGAGGACATG
ACAACACAAGAAGGAATTCACTCCTTCCCACTTCTAAGAGAAGTAGATGAGTGTCCATTAGGTCCCCCTGCTAGCTCATCAAATGGTGGTGTTCTTCGTTGTTGCAGAGC
AATCAAGAATCATTCGTTGAAGTATTCAGAGTCGTCAACGGAGCGTCCGTGGCTACGAGCGCGCGCATCAGAGACTTCAAGGGCGTCGGTTCGAGCTTGTGCGTGGACGG
CTGGAGTAAGAACTAATAACAATTGCTTCAGATATGAATCAAAACCAGGACGCGGCCTGGTGGTTGGGCTGAGCGGCTATTATTCTCGAAGTCATGTGTTCGATTCTGAT
TTTCAGCTTGGTTCATCCAGTTTTCTTGCCGGTTCAAAGGGTTTGGATGCGGTTCGAGACTATTTTGGGCTGGTTCTCGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGACGTCACAGCGTCGCGACGCTGTGCTGTATAGCGTCGCGACGCTACCCCCTTTCCGAGCCTATATAAGGCGCCCCTTGGTGCCTCATTTTACCATCAATCATCATAT
TCTTCCATTCCTTTCTTGCTTTCTTGGCTCCTTTGGGAGCCTCTCTCAAGGCTTCCAAGCCTTTTTGAGAGTTTCTTTAGTGGGAAACTTTTGGGGAATTTTGGAGAGCA
TTCTAGGAGGCTCAAGGAGTGTTCAGAGGGACTCCAAGCGTCAGCGAAGGGGTCTTCAACGCAACAAGGTGGTTAATTTGTTTCCGCTAGATCTCGAAATTGACAGGACT
CTTAGAACCATTCGTAGAGAAAAAAGATTAGCAGAAGCAATGGCCCAACAAGAAGCTCCCAAGGCGATCAGAGACTTTTTACAGCCAGTTCTCCCGACCGAAAATTCAGG
AATCGTTTACGCCCCAATACAAGCTACAAATTTTGAGTTAAAGACGGGATTGATTCAGATGGCACTCGATAATTCTTTTAAGGGACATCCTTATGAGGATCCTGTTGGGT
TTTATGCCCTAAAACTCGTAGATAGTGAATCATGGGTGAGAGTGGCCAATACGCCGACTCAATATGCCTTCCTTTTTGGGGACAAGACCGAGTGGGAGGCTGAGGACATG
ACAACACAAGAAGGAATTCACTCCTTCCCACTTCTAAGAGAAGTAGATGAGTGTCCATTAGGTCCCCCTGCTAGCTCATCAAATGGTGGTGTTCTTCGTTGTTGCAGAGC
AATCAAGAATCATTCGTTGAAGTATTCAGAGTCGTCAACGGAGCGTCCGTGGCTACGAGCGCGCGCATCAGAGACTTCAAGGGCGTCGGTTCGAGCTTGTGCGTGGACGG
CTGGAGTAAGAACTAATAACAATTGCTTCAGATATGAATCAAAACCAGGACGCGGCCTGGTGGTTGGGCTGAGCGGCTATTATTCTCGAAGTCATGTGTTCGATTCTGAT
TTTCAGCTTGGTTCATCCAGTTTTCTTGCCGGTTCAAAGGGTTTGGATGCGGTTCGAGACTATTTTGGGCTGGTTCTCGGCTAG
Protein sequenceShow/hide protein sequence
MTSQRRDAVLYSVATLPPFRAYIRRPLVPHFTINHHILPFLSCFLGSFGSLSQGFQAFLRVSLVGNFWGILESILGGSRSVQRDSKRQRRGLQRNKVVNLFPLDLEIDRT
LRTIRREKRLAEAMAQQEAPKAIRDFLQPVLPTENSGIVYAPIQATNFELKTGLIQMALDNSFKGHPYEDPVGFYALKLVDSESWVRVANTPTQYAFLFGDKTEWEAEDM
TTQEGIHSFPLLREVDECPLGPPASSSNGGVLRCCRAIKNHSLKYSESSTERPWLRARASETSRASVRACAWTAGVRTNNNCFRYESKPGRGLVVGLSGYYSRSHVFDSD
FQLGSSSFLAGSKGLDAVRDYFGLVLG