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Spg019742 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019742
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPolyprotein
Genome locationscaffold5:28496969..28498612
RNA-Seq ExpressionSpg019742
SyntenySpg019742
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043136.1 putative Retrotransposon protein [Cucumis melo var. makuwa]3.1e-2769.42Show/hide
Query:  ARGR--ASSSRGSRPTSSS-SAPPPMSADQYAMELGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGVVQLRPPVSPSSVMGSSIPSSSTYS
        ARGR  ++SS+G+RP SSS SAP P+SADQYAM+LGFT VTR  SR  GI    P ESST PPRPS NL+RPS GVVQ+RPP SPSS   SS P  +TYS
Subjt:  ARGR--ASSSRGSRPTSSS-SAPPPMSADQYAMELGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGVVQLRPPVSPSSVMGSSIPSSSTYS

Query:  AAVTPEKRFVPRPEIKGYFQK
         AVTP+KRFVPRPEIK YFQK
Subjt:  AAVTPEKRFVPRPEIKGYFQK

KAA0049709.1 hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa]7.9e-3151.42Show/hide
Query:  ARGR--ASSSRGSRPTSSS-SAPPPMSADQYAMELGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGVVQLRPPVSPSSVMGSSIPSSSTYS
        ARGR  ++SS+G+RP+SSS S P PMSADQYAM+LGFT VTRSRSR   IR   P ESST PP+PS NL+RPSGGVVQ+R PVSPSS   SS P  +TYS
Subjt:  ARGR--ASSSRGSRPTSSS-SAPPPMSADQYAMELGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGVVQLRPPVSPSSVMGSSIPSSSTYS

Query:  AAVTPEKRFVPRPEIKGYFQKSQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRIL----QMAASSASPASSAQGEDE--D
         AVTP+KR                                               SKLLAALAQ T+DADFQR+L      ++SS SP+SS Q ++E  D
Subjt:  AAVTPEKRFVPRPEIKGYFQKSQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRIL----QMAASSASPASSAQGEDE--D

Query:  PDYDLDDPFLDS
         +YDLDDP+LDS
Subjt:  PDYDLDDPFLDS

KAA0066384.1 hypothetical protein E6C27_scaffold21G004590 [Cucumis melo var. makuwa]8.7e-3049.04Show/hide
Query:  ARGR--ASSSRGSRPTSSS-SAPPPMSADQYAMELGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGVVQLRPPVSPSSVMGSSIPSSSTYS
        ARGR  ++SS+G+  +SSS SAP P  ADQYAME+GFT VTRSRSR   IR +  +  ST PPRPS NL+ PS GVVQ+RPP SPSS   SS P S+TYS
Subjt:  ARGR--ASSSRGSRPTSSS-SAPPPMSADQYAMELGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGVVQLRPPVSPSSVMGSSIPSSSTYS

Query:  AAVTPEKRFVPRPEIKGYFQKSQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASSASPASSAQGEDE--DPDYD
         AVTP+KRFVPRPEIK YFQK                                     L  +     + ++Q  +  ++SS SP+SS Q ++E  DP+YD
Subjt:  AAVTPEKRFVPRPEIKGYFQKSQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASSASPASSAQGEDE--DPDYD

Query:  LDDPFLDS
        LDDPFLDS
Subjt:  LDDPFLDS

TYJ98361.1 hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa]7.6e-4257.48Show/hide
Query:  ARGR--ASSSRGSRPTSSS-SAPPPMSADQYAMELGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGVVQLRPPVSPSSVMGSSIPSSSTYS
        ARGR  ++SS+G+ P+SSS SAP PMS DQYAM+LG+T V +SRS+  GI    PMESST PPRPS NL+ P G V+Q+R   SPSS   SS    +TYS
Subjt:  ARGR--ASSSRGSRPTSSS-SAPPPMSADQYAMELGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGVVQLRPPVSPSSVMGSSIPSSSTYS

Query:  AAVTPEKRFVPRPEIKGYFQKSQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMA---ASSASPASSAQGEDE---D
         AVTP+K+FVPR EIK YFQK        ++  +  NG LQDID ++NA+FLNDK K LAAL Q T DADFQR+L  A   +SS+ PA S   EDE   D
Subjt:  AAVTPEKRFVPRPEIKGYFQKSQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMA---ASSASPASSAQGEDE---D

Query:  PDYDLDDPFLDSHP
         +YDLDDPFLDS P
Subjt:  PDYDLDDPFLDSHP

TYK11076.1 hypothetical protein E5676_scaffold73G00620 [Cucumis melo var. makuwa]8.2e-2868.64Show/hide
Query:  RGRASSSRGSRPTSSS-SAPPPMSADQYAMELGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGVVQLRPPVSPSSVMGSSIPSSSTYSAAV
        R  ++SS+G+RP+SSS SAP PMSADQY M+LGFT V RSRSR   IR   P ESST PPRP ANL+RPSG VVQ+RPP SPSS   SS P  +TYS AV
Subjt:  RGRASSSRGSRPTSSS-SAPPPMSADQYAMELGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGVVQLRPPVSPSSVMGSSIPSSSTYSAAV

Query:  TPEKRFVPRPEIKGYFQK
        TP+KRFVPRP+IK YFQK
Subjt:  TPEKRFVPRPEIKGYFQK

TrEMBL top hitse value%identityAlignment
A0A5A7TM80 Putative Retrotransposon protein1.5e-2769.42Show/hide
Query:  ARGR--ASSSRGSRPTSSS-SAPPPMSADQYAMELGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGVVQLRPPVSPSSVMGSSIPSSSTYS
        ARGR  ++SS+G+RP SSS SAP P+SADQYAM+LGFT VTR  SR  GI    P ESST PPRPS NL+RPS GVVQ+RPP SPSS   SS P  +TYS
Subjt:  ARGR--ASSSRGSRPTSSS-SAPPPMSADQYAMELGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGVVQLRPPVSPSSVMGSSIPSSSTYS

Query:  AAVTPEKRFVPRPEIKGYFQK
         AVTP+KRFVPRPEIK YFQK
Subjt:  AAVTPEKRFVPRPEIKGYFQK

A0A5A7U8A0 Uncharacterized protein3.8e-3151.42Show/hide
Query:  ARGR--ASSSRGSRPTSSS-SAPPPMSADQYAMELGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGVVQLRPPVSPSSVMGSSIPSSSTYS
        ARGR  ++SS+G+RP+SSS S P PMSADQYAM+LGFT VTRSRSR   IR   P ESST PP+PS NL+RPSGGVVQ+R PVSPSS   SS P  +TYS
Subjt:  ARGR--ASSSRGSRPTSSS-SAPPPMSADQYAMELGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGVVQLRPPVSPSSVMGSSIPSSSTYS

Query:  AAVTPEKRFVPRPEIKGYFQKSQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRIL----QMAASSASPASSAQGEDE--D
         AVTP+KR                                               SKLLAALAQ T+DADFQR+L      ++SS SP+SS Q ++E  D
Subjt:  AAVTPEKRFVPRPEIKGYFQKSQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRIL----QMAASSASPASSAQGEDE--D

Query:  PDYDLDDPFLDS
         +YDLDDP+LDS
Subjt:  PDYDLDDPFLDS

A0A5D3BI61 Uncharacterized protein3.7e-4257.48Show/hide
Query:  ARGR--ASSSRGSRPTSSS-SAPPPMSADQYAMELGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGVVQLRPPVSPSSVMGSSIPSSSTYS
        ARGR  ++SS+G+ P+SSS SAP PMS DQYAM+LG+T V +SRS+  GI    PMESST PPRPS NL+ P G V+Q+R   SPSS   SS    +TYS
Subjt:  ARGR--ASSSRGSRPTSSS-SAPPPMSADQYAMELGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGVVQLRPPVSPSSVMGSSIPSSSTYS

Query:  AAVTPEKRFVPRPEIKGYFQKSQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMA---ASSASPASSAQGEDE---D
         AVTP+K+FVPR EIK YFQK        ++  +  NG LQDID ++NA+FLNDK K LAAL Q T DADFQR+L  A   +SS+ PA S   EDE   D
Subjt:  AAVTPEKRFVPRPEIKGYFQKSQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMA---ASSASPASSAQGEDE---D

Query:  PDYDLDDPFLDSHP
         +YDLDDPFLDS P
Subjt:  PDYDLDDPFLDSHP

A0A5D3BPD3 Uncharacterized protein4.2e-3049.04Show/hide
Query:  ARGR--ASSSRGSRPTSSS-SAPPPMSADQYAMELGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGVVQLRPPVSPSSVMGSSIPSSSTYS
        ARGR  ++SS+G+  +SSS SAP P  ADQYAME+GFT VTRSRSR   IR +  +  ST PPRPS NL+ PS GVVQ+RPP SPSS   SS P S+TYS
Subjt:  ARGR--ASSSRGSRPTSSS-SAPPPMSADQYAMELGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGVVQLRPPVSPSSVMGSSIPSSSTYS

Query:  AAVTPEKRFVPRPEIKGYFQKSQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASSASPASSAQGEDE--DPDYD
         AVTP+KRFVPRPEIK YFQK                                     L  +     + ++Q  +  ++SS SP+SS Q ++E  DP+YD
Subjt:  AAVTPEKRFVPRPEIKGYFQKSQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASSASPASSAQGEDE--DPDYD

Query:  LDDPFLDS
        LDDPFLDS
Subjt:  LDDPFLDS

A0A5D3CKX1 Uncharacterized protein4.0e-2868.64Show/hide
Query:  RGRASSSRGSRPTSSS-SAPPPMSADQYAMELGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGVVQLRPPVSPSSVMGSSIPSSSTYSAAV
        R  ++SS+G+RP+SSS SAP PMSADQY M+LGFT V RSRSR   IR   P ESST PPRP ANL+RPSG VVQ+RPP SPSS   SS P  +TYS AV
Subjt:  RGRASSSRGSRPTSSS-SAPPPMSADQYAMELGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGVVQLRPPVSPSSVMGSSIPSSSTYSAAV

Query:  TPEKRFVPRPEIKGYFQK
        TP+KRFVPRP+IK YFQK
Subjt:  TPEKRFVPRPEIKGYFQK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGAAGCAAGAGGCAGAGCCTCCTCCTCAAGGGGCAGTCGCCCAACTTCTTCTTCCTCTGCACCTCCTCCCATGAGTGCAGATCAATATGCAATGGAACTAGGGTT
TACTCCGGTAACCCGTTCCAGGTCAAGGCAAGGCGGTATACGCCCTATGCCTCCAATGGAGTCTTCTACTCCACCTCCACGGCCTTCGGCCAACCTCGTCCGTCCTTCAG
GCGGAGTCGTTCAACTGAGACCTCCTGTCTCTCCCTCTTCAGTCATGGGATCATCAATCCCATCCTCTTCAACCTACTCTGCGGCGGTGACACCGGAAAAGAGGTTTGTA
CCTCGCCCAGAGATCAAAGGTTATTTTCAAAAATCCCAGAACGCAACCCTCAACAAAGTTAAAGAGTGGTTTGCAGCCAATGGATATCTTCAGGATATCGACATCAAGAG
AAACGCAGAGTTTCTCAATGACAAATCAAAGCTCCTAGCAGCTCTAGCTCAGACCACATCTGACGCAGACTTCCAAAGAATTCTCCAGATGGCGGCTTCAAGCGCGTCCC
CAGCTTCTTCTGCTCAAGGAGAAGACGAAGATCCGGATTACGATCTGGACGACCCGTTCCTCGACTCACACCCCCATGTGAGCTCCGAGTCAAATAATCCTGTTTCACAT
AGAAGCAGTCAGAATTTCAGGAATACTTCAAAAGGAAATCGTGAGGACCTAGTTTGGCGTTTACCGGCAGATGATGATGTAAGTCCGGGTTTAGCCTATAATCCGCCTAG
GGTGATCGAGGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTGAAGCAAGAGGCAGAGCCTCCTCCTCAAGGGGCAGTCGCCCAACTTCTTCTTCCTCTGCACCTCCTCCCATGAGTGCAGATCAATATGCAATGGAACTAGGGTT
TACTCCGGTAACCCGTTCCAGGTCAAGGCAAGGCGGTATACGCCCTATGCCTCCAATGGAGTCTTCTACTCCACCTCCACGGCCTTCGGCCAACCTCGTCCGTCCTTCAG
GCGGAGTCGTTCAACTGAGACCTCCTGTCTCTCCCTCTTCAGTCATGGGATCATCAATCCCATCCTCTTCAACCTACTCTGCGGCGGTGACACCGGAAAAGAGGTTTGTA
CCTCGCCCAGAGATCAAAGGTTATTTTCAAAAATCCCAGAACGCAACCCTCAACAAAGTTAAAGAGTGGTTTGCAGCCAATGGATATCTTCAGGATATCGACATCAAGAG
AAACGCAGAGTTTCTCAATGACAAATCAAAGCTCCTAGCAGCTCTAGCTCAGACCACATCTGACGCAGACTTCCAAAGAATTCTCCAGATGGCGGCTTCAAGCGCGTCCC
CAGCTTCTTCTGCTCAAGGAGAAGACGAAGATCCGGATTACGATCTGGACGACCCGTTCCTCGACTCACACCCCCATGTGAGCTCCGAGTCAAATAATCCTGTTTCACAT
AGAAGCAGTCAGAATTTCAGGAATACTTCAAAAGGAAATCGTGAGGACCTAGTTTGGCGTTTACCGGCAGATGATGATGTAAGTCCGGGTTTAGCCTATAATCCGCCTAG
GGTGATCGAGGGTTAG
Protein sequenceShow/hide protein sequence
MSEARGRASSSRGSRPTSSSSAPPPMSADQYAMELGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGVVQLRPPVSPSSVMGSSIPSSSTYSAAVTPEKRFV
PRPEIKGYFQKSQNATLNKVKEWFAANGYLQDIDIKRNAEFLNDKSKLLAALAQTTSDADFQRILQMAASSASPASSAQGEDEDPDYDLDDPFLDSHPHVSSESNNPVSH
RSSQNFRNTSKGNREDLVWRLPADDDVSPGLAYNPPRVIEG