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Spg019767 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019767
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold5:28631024..28632535
RNA-Seq ExpressionSpg019767
SyntenySpg019767
Gene Ontology termsGO:0031011 - Ino80 complex (cellular component)
InterPro domainsIPR006880 - INO80 complex subunit B-like conserved region


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB53755.1 hypothetical protein L484_022412 [Morus notabilis]2.9e-1428.37Show/hide
Query:  PHFLRAGITNQGWESLCSKP--------------------ESVNTQ------SPSAINALYNLQDFPHAGYNEMAVAPSNEQLSDAVREVAY--------
        P F+   I   GW   C  P                    E+V  Q      +  AIN+++ L++     Y + A   ++EQL   + EVA         
Subjt:  PHFLRAGITNQGWESLCSKP--------------------ESVNTQ------SPSAINALYNLQDFPHAGYNEMAVAPSNEQLSDAVREVAY--------

Query:  -----------LKREANTWMGFIKQRLLPTTHDSTVAREQVLLAFAILRSLSIDVGKIIASEISGC-WKKKVGKLFFPNTITMLCKRAGVPENEGDVILF
                   LKR A  W  F+  R +P+TH  TVA+++VLL ++IL  +S+++ +I   EI  C   +K G L+FP+ IT L  +A VP ++ + I+ 
Subjt:  -----------LKREANTWMGFIKQRLLPTTHDSTVAREQVLLAFAILRSLSIDVGKIIASEISGC-WKKKVGKLFFPNTITMLCKRAGVPENEGDVILF

Query:  DKGIIDTPNLARLQR
        + G I T +++R+ +
Subjt:  DKGIIDTPNLARLQR

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]1.1e-1342.86Show/hide
Query:  EVAYLKREANTWMGFIKQRLLPTTHDSTVAREQVLLAFAILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTP
        E   L   A  W  F+K RLLPTTH  TV+++++LL +++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A  P    +  L   G ID  
Subjt:  EVAYLKREANTWMGFIKQRLLPTTHDSTVAREQVLLAFAILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTP

Query:  NLARLQRTQEAR
         +AR+  TQE +
Subjt:  NLARLQRTQEAR

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]2.5e-1335.62Show/hide
Query:  SPSAINALYNLQDFPHAGYNEMAVAPSNEQLSDAVREVAY-------------------LKREANTWMGFIKQRLLPTTHDSTVAREQVLLAFAILRSLS
        S  AIN +Y L D P   ++E   A +  +L+  +  VA                    L   A  W  F+K RLLPTTH  TV++E+VLL +++L   S
Subjt:  SPSAINALYNLQDFPHAGYNEMAVAPSNEQLSDAVREVAY-------------------LKREANTWMGFIKQRLLPTTHDSTVAREQVLLAFAILRSLS

Query:  IDVGKIIASEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTPNLARL
        I+VG+II  EI     +K G LFFP+ IT +C  A  P    +  L + G ID   +AR+
Subjt:  IDVGKIIASEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTPNLARL

PON65869.1 hypothetical protein PanWU01x14_113580, partial [Parasponia andersonii]9.3e-1343.56Show/hide
Query:  LKREANTWMGFIKQRLLPTTHDSTVAREQVLLAFAILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTPNLAR
        L   A  W  F+K RLLPTTH   V++E VLL +++L   SI+VG+II  EI  C  +K G LFFP+ IT +C+ A  P    +  L + G ID   +AR
Subjt:  LKREANTWMGFIKQRLLPTTHDSTVAREQVLLAFAILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTPNLAR

Query:  L
        +
Subjt:  L

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]5.8e-1535.71Show/hide
Query:  LKREANTWMGFIKQRLLPTTHDSTVAREQVLLAFAILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVIL---FDKGIIDTPN
        LK  AN W+ FI+  L PTTHDS+++ E+++L + ++   +I+VGK++   I  C K++ GKLFFP+ I  L  +AGVPE   D+++    +K  ID   
Subjt:  LKREANTWMGFIKQRLLPTTHDSTVAREQVLLAFAILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVIL---FDKGIIDTPN

Query:  LARLQRTQEARQGGLIYGINTILEQ-LALSASRQEFVERQ
        +++L+   E  +G  + G+   +E+ L  S S  +F+  Q
Subjt:  LARLQRTQEARQGGLIYGINTILEQ-LALSASRQEFVERQ

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)1.0e-1229.62Show/hide
Query:  KAREEAEKKAEEEKLLKRRADKGKSVVAASEEPDEIKEPYGDLPHFLRAGITNQGWESLCSKPES----------VNTQSP----------------SAI
        K   EA +   E  +  R  +  K  V       +  E  G LP F+   IT   W+  C+ PE            N   P                 AI
Subjt:  KAREEAEKKAEEEKLLKRRADKGKSVVAASEEPDEIKEPYGDLPHFLRAGITNQGWESLCSKPES----------VNTQSP----------------SAI

Query:  NALYNLQDFPHAGYNEMAVAPSNEQLSDAVREVAYLKRE-------------------ANTWMGFIKQRLLPTTHDSTVAREQVLLAFAILRSLSIDVGK
        NA++ L D P   ++E     +   L   +  VA    E                   A  W  F+K  LLPTTH  TV+++++LL  ++L   SI+VG+
Subjt:  NALYNLQDFPHAGYNEMAVAPSNEQLSDAVREVAYLKRE-------------------ANTWMGFIKQRLLPTTHDSTVAREQVLLAFAILRSLSIDVGK

Query:  IIASEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTPNLARLQRTQE
        +I SEI  C  +K G LFFP+ IT LC+ A  P    +  L + G ID   +AR+  TQE
Subjt:  IIASEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTPNLARLQRTQE

A0A2P5BCG4 Uncharacterized protein (Fragment)1.6e-1027.94Show/hide
Query:  ERENAEREEQEKKEAEDKAREEAEKKAEEEKLLKRRADKGKSVVAASEEPDEIKEPYGDLPHFLRAGITNQGWESLCSKPES----------VNTQSP--
        ER +  R     K    KA +  + + E          + + + A      +  E  G LP F+   IT   W+  C+ PE            N   P  
Subjt:  ERENAEREEQEKKEAEDKAREEAEKKAEEEKLLKRRADKGKSVVAASEEPDEIKEPYGDLPHFLRAGITNQGWESLCSKPES----------VNTQSP--

Query:  --------------SAINALYNLQDFPHAGYNEMAVAPSNEQLSDAVREVAYLKRE-------------------ANTWMGFIKQRLLPTTHDSTVAREQ
                       AINA++ L D P   ++E     + + L   +  VA    E                   A  W  F+K RLLPTTH  TV++++
Subjt:  --------------SAINALYNLQDFPHAGYNEMAVAPSNEQLSDAVREVAYLKRE-------------------ANTWMGFIKQRLLPTTHDSTVAREQ

Query:  VLLAFAILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTPNLARL
        +LL  ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A  P    +  L + G ID   +AR+
Subjt:  VLLAFAILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTPNLARL

A0A2P5CEY2 Uncharacterized protein5.3e-1442.86Show/hide
Query:  EVAYLKREANTWMGFIKQRLLPTTHDSTVAREQVLLAFAILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTP
        E   L   A  W  F+K RLLPTTH  TV+++++LL +++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A  P    +  L   G ID  
Subjt:  EVAYLKREANTWMGFIKQRLLPTTHDSTVAREQVLLAFAILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTP

Query:  NLARLQRTQEAR
         +AR+  TQE +
Subjt:  NLARLQRTQEAR

A0A2P5CPE8 Uncharacterized protein1.2e-1335.62Show/hide
Query:  SPSAINALYNLQDFPHAGYNEMAVAPSNEQLSDAVREVAY-------------------LKREANTWMGFIKQRLLPTTHDSTVAREQVLLAFAILRSLS
        S  AIN +Y L D P   ++E   A +  +L+  +  VA                    L   A  W  F+K RLLPTTH  TV++E+VLL +++L   S
Subjt:  SPSAINALYNLQDFPHAGYNEMAVAPSNEQLSDAVREVAY-------------------LKREANTWMGFIKQRLLPTTHDSTVAREQVLLAFAILRSLS

Query:  IDVGKIIASEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTPNLARL
        I+VG+II  EI     +K G LFFP+ IT +C  A  P    +  L + G ID   +AR+
Subjt:  IDVGKIIASEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTPNLARL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAAACGAGAGCAAGAAAAGAGAGAGACAATGAGGAAGAGGAGGTGCCTGTTACCCCCGAAGTACAGAAAGTGAAAACAAAGAAAAAGAAAACGCCGGAGGAAAA
AGAAGCCAAAAGAAGGAGAAGGCAGCAGAGGGCTGAGGTTCAAGAAGCTGTTCAGAAGGCAGCGGAGGACGTTGCTGCTGCTGAAGAAGGCAATCCGAGGGAACCTGAAG
TACAAAACCCAGAGCAGATTGAGCCGAGAGTTACGGATATAGAGGAAGTGCGAGAGGAAAATACAGAGGAAGTTGAAGAAAAGCAGACTGAGGATGTGCAAGAAGAACAG
GCAGAAGTTGCGCCTGAAAAAGGTAATGAGCCAGTACAGGAGGCTCGAGTGGAGGTGATCATGTCGGAAGTGCCAAAACGTCGCCGTGTGAAGCGGAAAGCAGGTCGTGT
CAGGGTAGTCCGAACTGATACTCCCTCGCCGCCAACCACTGACTCTGAGAGAGAAAATGCAGAGAGAGAGGAACAGGAGAAAAAAGAGGCCGAGGATAAAGCAAGAGAGG
AAGCAGAGAAAAAGGCTGAAGAAGAAAAGTTGCTCAAGCGAAGGGCAGACAAGGGCAAGAGTGTTGTTGCGGCATCGGAGGAACCTGACGAGATAAAAGAGCCATATGGT
GATCTTCCGCATTTTCTGAGGGCCGGCATTACGAACCAAGGTTGGGAATCATTATGTTCAAAGCCTGAATCTGTGAACACGCAGAGTCCTAGTGCTATTAACGCCCTGTA
CAACCTTCAAGACTTCCCCCACGCAGGATACAATGAGATGGCTGTAGCACCATCTAATGAGCAGCTGAGCGATGCTGTGCGGGAAGTTGCCTATCTGAAGAGGGAAGCAA
ATACATGGATGGGATTTATCAAACAAAGGTTGCTTCCAACGACTCATGACTCGACGGTTGCTAGGGAACAGGTTCTTCTGGCGTTCGCGATTTTGAGGTCTCTCAGCATT
GATGTAGGGAAGATTATTGCTAGTGAAATATCTGGATGTTGGAAAAAGAAAGTGGGAAAGTTGTTTTTCCCGAATACAATCACAATGCTTTGCAAGCGAGCAGGGGTTCC
GGAGAATGAAGGAGATGTCATATTATTTGACAAGGGAATTATTGATACGCCTAACTTGGCACGACTTCAGCGTACGCAAGAGGCACGCCAGGGTGGGCTTATCTATGGCA
TCAACACAATTTTAGAACAACTAGCACTGTCGGCCAGCAGGCAGGAGTTTGTCGAGAGGCAAGCTTTAACCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAAACGAGAGCAAGAAAAGAGAGAGACAATGAGGAAGAGGAGGTGCCTGTTACCCCCGAAGTACAGAAAGTGAAAACAAAGAAAAAGAAAACGCCGGAGGAAAA
AGAAGCCAAAAGAAGGAGAAGGCAGCAGAGGGCTGAGGTTCAAGAAGCTGTTCAGAAGGCAGCGGAGGACGTTGCTGCTGCTGAAGAAGGCAATCCGAGGGAACCTGAAG
TACAAAACCCAGAGCAGATTGAGCCGAGAGTTACGGATATAGAGGAAGTGCGAGAGGAAAATACAGAGGAAGTTGAAGAAAAGCAGACTGAGGATGTGCAAGAAGAACAG
GCAGAAGTTGCGCCTGAAAAAGGTAATGAGCCAGTACAGGAGGCTCGAGTGGAGGTGATCATGTCGGAAGTGCCAAAACGTCGCCGTGTGAAGCGGAAAGCAGGTCGTGT
CAGGGTAGTCCGAACTGATACTCCCTCGCCGCCAACCACTGACTCTGAGAGAGAAAATGCAGAGAGAGAGGAACAGGAGAAAAAAGAGGCCGAGGATAAAGCAAGAGAGG
AAGCAGAGAAAAAGGCTGAAGAAGAAAAGTTGCTCAAGCGAAGGGCAGACAAGGGCAAGAGTGTTGTTGCGGCATCGGAGGAACCTGACGAGATAAAAGAGCCATATGGT
GATCTTCCGCATTTTCTGAGGGCCGGCATTACGAACCAAGGTTGGGAATCATTATGTTCAAAGCCTGAATCTGTGAACACGCAGAGTCCTAGTGCTATTAACGCCCTGTA
CAACCTTCAAGACTTCCCCCACGCAGGATACAATGAGATGGCTGTAGCACCATCTAATGAGCAGCTGAGCGATGCTGTGCGGGAAGTTGCCTATCTGAAGAGGGAAGCAA
ATACATGGATGGGATTTATCAAACAAAGGTTGCTTCCAACGACTCATGACTCGACGGTTGCTAGGGAACAGGTTCTTCTGGCGTTCGCGATTTTGAGGTCTCTCAGCATT
GATGTAGGGAAGATTATTGCTAGTGAAATATCTGGATGTTGGAAAAAGAAAGTGGGAAAGTTGTTTTTCCCGAATACAATCACAATGCTTTGCAAGCGAGCAGGGGTTCC
GGAGAATGAAGGAGATGTCATATTATTTGACAAGGGAATTATTGATACGCCTAACTTGGCACGACTTCAGCGTACGCAAGAGGCACGCCAGGGTGGGCTTATCTATGGCA
TCAACACAATTTTAGAACAACTAGCACTGTCGGCCAGCAGGCAGGAGTTTGTCGAGAGGCAAGCTTTAACCTTCTAG
Protein sequenceShow/hide protein sequence
MAKTRARKERDNEEEEVPVTPEVQKVKTKKKKTPEEKEAKRRRRQQRAEVQEAVQKAAEDVAAAEEGNPREPEVQNPEQIEPRVTDIEEVREENTEEVEEKQTEDVQEEQ
AEVAPEKGNEPVQEARVEVIMSEVPKRRRVKRKAGRVRVVRTDTPSPPTTDSERENAEREEQEKKEAEDKAREEAEKKAEEEKLLKRRADKGKSVVAASEEPDEIKEPYG
DLPHFLRAGITNQGWESLCSKPESVNTQSPSAINALYNLQDFPHAGYNEMAVAPSNEQLSDAVREVAYLKREANTWMGFIKQRLLPTTHDSTVAREQVLLAFAILRSLSI
DVGKIIASEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTPNLARLQRTQEARQGGLIYGINTILEQLALSASRQEFVERQALTF