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Spg019800 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019800
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibosomal protein S12/S23 family protein
Genome locationscaffold5:32153389..32157340
RNA-Seq ExpressionSpg019800
SyntenySpg019800
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09680.1 Ribosomal protein S12/S23 family protein5.2e-0472.73Show/hide
Query:  EEVIIARFGRKRH-VGDILGVRLKVVNVLGVSL
        +EV+IA FGRK H VGDI GVR KVV V GVSL
Subjt:  EEVIIARFGRKRH-VGDILGVRLKVVNVLGVSL
AT5G02960.1 Ribosomal protein S12/S23 family protein5.2e-0472.73Show/hide
Query:  EEVIIARFGRKRH-VGDILGVRLKVVNVLGVSL
        +EV+IA FGRK H VGDI GVR KVV V GVSL
Subjt:  EEVIIARFGRKRH-VGDILGVRLKVVNVLGVSL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTAGCCGCCCAACTCCCTCTCCCTTGCATTTTCTTCTTCTTTTCGTTCAGCCGTGAGCCACCTCCCAGCAGCCCATCCCCGTTTTTCTTCTTCGTCCGGCCAGCCATCCT
CTCGCAGCTCCAACGCTGGCGACAGGTTCAGCTCGTGATTCCGACGGCGTCTCTCCAGCGCAGTGGGCGGCGGTGGCTTCATTGTTCGGCCAACAGCGTGGGTGTGGTCA
TGTTAGCAGCGTTTTCCGGCGATCAAGCTGTTAGGTGTGGGCAGCAGTATTTTCAGGGGCGTTTTCTGCGTTTTCCGGTGTTTTTAGGTGAGTTTTCGACGTGGCAAGCT
TTCCCCTTTATTTTCGGCGGTTCGAGCAATAGCGTTTCGATTTCAGCACCTTTGGGCGTTTTCAGCTTTGGGCACCCATTGAGATTGGAGCTTGGATCGATGAAATTAGG
CCGAATTAGAACCCGTATAGCAAGCGTTGGCTCCATTGGCACTATGCATGACAACTTTGATTCGAGGATGATTAGCAAAGGTAATCTGTTCATGGCTTATAACTCCTTGA
GGTTGATTGACATGGTTGATCTGTATACTCCTTTCATCTTAATAGTGATTGAAATGCTAGCATTGACGACTCGCTTTGATTTGTGGGAGTTTGTTGTGGAATTCTCTGTG
TCTATAGAAGCACGTTTCTCATGTTTAACAGGTCAAAATTGGCTCATTGCTGGATTGTTTAGACGGCTCAAGTTATGGATCCAATTACGCGATGCAAAAGTGACAAATGC
TGAAAAGGCAATTGAAATGATGGGTGTCTCACTACAATTTCATAATCTCATGCATACAATTATGAAATCATCAAATTTGTGTCTTGAAGATTGCTCTAAAGAGGAGGTGA
TCATTGCTAGATTTGGTAGAAAAAGACATGTTGGAGATATTCTTGGAGTTAGATTAAAGGTGGTGAACGTGTTAGGTGTATCTTTACGTATCTCTACTGGCTCTCTTCAA
GGAAAAGGAGAAGTCAAGGTCATAAACTTCTTGGTTTTCCAAGCTTGGAGAAGTTAA
mRNA sequenceShow/hide mRNA sequence
TTAGCCGCCCAACTCCCTCTCCCTTGCATTTTCTTCTTCTTTTCGTTCAGCCGTGAGCCACCTCCCAGCAGCCCATCCCCGTTTTTCTTCTTCGTCCGGCCAGCCATCCT
CTCGCAGCTCCAACGCTGGCGACAGGTTCAGCTCGTGATTCCGACGGCGTCTCTCCAGCGCAGTGGGCGGCGGTGGCTTCATTGTTCGGCCAACAGCGTGGGTGTGGTCA
TGTTAGCAGCGTTTTCCGGCGATCAAGCTGTTAGGTGTGGGCAGCAGTATTTTCAGGGGCGTTTTCTGCGTTTTCCGGTGTTTTTAGGTGAGTTTTCGACGTGGCAAGCT
TTCCCCTTTATTTTCGGCGGTTCGAGCAATAGCGTTTCGATTTCAGCACCTTTGGGCGTTTTCAGCTTTGGGCACCCATTGAGATTGGAGCTTGGATCGATGAAATTAGG
CCGAATTAGAACCCGTATAGCAAGCGTTGGCTCCATTGGCACTATGCATGACAACTTTGATTCGAGGATGATTAGCAAAGGTAATCTGTTCATGGCTTATAACTCCTTGA
GGTTGATTGACATGGTTGATCTGTATACTCCTTTCATCTTAATAGTGATTGAAATGCTAGCATTGACGACTCGCTTTGATTTGTGGGAGTTTGTTGTGGAATTCTCTGTG
TCTATAGAAGCACGTTTCTCATGTTTAACAGGTCAAAATTGGCTCATTGCTGGATTGTTTAGACGGCTCAAGTTATGGATCCAATTACGCGATGCAAAAGTGACAAATGC
TGAAAAGGCAATTGAAATGATGGGTGTCTCACTACAATTTCATAATCTCATGCATACAATTATGAAATCATCAAATTTGTGTCTTGAAGATTGCTCTAAAGAGGAGGTGA
TCATTGCTAGATTTGGTAGAAAAAGACATGTTGGAGATATTCTTGGAGTTAGATTAAAGGTGGTGAACGTGTTAGGTGTATCTTTACGTATCTCTACTGGCTCTCTTCAA
GGAAAAGGAGAAGTCAAGGTCATAAACTTCTTGGTTTTCCAAGCTTGGAGAAGTTAA
Protein sequenceShow/hide protein sequence
LAAQLPLPCIFFFFSFSREPPPSSPSPFFFFVRPAILSQLQRWRQVQLVIPTASLQRSGRRWLHCSANSVGVVMLAAFSGDQAVRCGQQYFQGRFLRFPVFLGEFSTWQA
FPFIFGGSSNSVSISAPLGVFSFGHPLRLELGSMKLGRIRTRIASVGSIGTMHDNFDSRMISKGNLFMAYNSLRLIDMVDLYTPFILIVIEMLALTTRFDLWEFVVEFSV
SIEARFSCLTGQNWLIAGLFRRLKLWIQLRDAKVTNAEKAIEMMGVSLQFHNLMHTIMKSSNLCLEDCSKEEVIIARFGRKRHVGDILGVRLKVVNVLGVSLRISTGSLQ
GKGEVKVINFLVFQAWRS