; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg019806 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019806
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H
Genome locationscaffold5:34284241..34287707
RNA-Seq ExpressionSpg019806
SyntenySpg019806
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]1.5e-2444.3Show/hide
Query:  RHEHSSANGQG-RAEAKEPQGRAEPKTKYNRYTPLTASLEQVLASIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIETLIREGYL
        + E S    QG R E ++   + +P  K+ +YT  T  LEQVL  I++  LLK PER+ +   +R++ +YC+FH DHGH T++C  L++E+E LI  GYL
Subjt:  RHEHSSANGQG-RAEAKEPQGRAEPKTKYNRYTPLTASLEQVLASIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIETLIREGYL

Query:  KEFVGQDRGKRPIPTDQGKEGNNPPLEIRTILGGPLGGESSRKRKAAVREAKLEPREQ
        KE+V     + P  T  G+   +P  EIRTI+GGP+  ES RKRK  VREA+   REQ
Subjt:  KEFVGQDRGKRPIPTDQGKEGNNPPLEIRTILGGPLGGESSRKRKAAVREAKLEPREQ

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]1.5e-2746.06Show/hide
Query:  DGGRS--RHEHSSANGQG-RAEAKEPQGRAEPKTKYNRYTPLTASLEQVLASIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIET
        DG R+  + E S    QG R E ++   + +P  K+ +YTP T  +EQVL  I+D  LLK PER+++   +R++ +YC+FH DHGH T++C  L++E+E 
Subjt:  DGGRS--RHEHSSANGQG-RAEAKEPQGRAEPKTKYNRYTPLTASLEQVLASIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIET

Query:  LIREGYLKEFVGQDRGKRPIPTDQGKEGNNPPLEIRTILGGPLGGESSRKRKAAVREAKLEPREQ
        LIR GYLKE+V     + P  T  G+   +P  EIRTI+GGP+  ES RKRKA VREA+   REQ
Subjt:  LIREGYLKEFVGQDRGKRPIPTDQGKEGNNPPLEIRTILGGPLGGESSRKRKAAVREAKLEPREQ

XP_022159192.1 uncharacterized protein LOC111025612 [Momordica charantia]6.9e-2547.79Show/hide
Query:  GRAEPKTKYNRYTPLTASLEQVLASIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGQDRGKRPIPTDQGKE
        G+ +   K+ +YTP T  LEQVL  I+D  LLK PE +++ P++R++ +YC+FH DHGH T +C  L++E+E LIR+GYLKE+V  D    P   ++  +
Subjt:  GRAEPKTKYNRYTPLTASLEQVLASIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGQDRGKRPIPTDQGKE

Query:  GNNPPLEIRTILGGPLGGESSRKRKAAVREAKLEPR
          +P  EIRTI+GG    ES RKRKA+VREA+  PR
Subjt:  GNNPPLEIRTILGGPLGGESSRKRKAAVREAKLEPR

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]8.9e-2544.85Show/hide
Query:  DGGRS--RHEHSSANGQG-RAEAKEPQGRAEPKTKYNRYTPLTASLEQVLASIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIET
        DG R+  + E S    QG R E ++   + +P  K+ +YTP T  LEQVL  I+D  LLK PER++    +R++ +YC+FH DH H T++   L++E+E 
Subjt:  DGGRS--RHEHSSANGQG-RAEAKEPQGRAEPKTKYNRYTPLTASLEQVLASIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIET

Query:  LIREGYLKEFVGQDRGKRPIPTDQGKEGNNPPLEIRTILGGPLGGESSRKRKAAVREAKLEPREQ
        LIR GYL+E+V     + P  T  G+   +P  EIRTI+GGP+  ES+RKRKA VREA+   REQ
Subjt:  LIREGYLKEFVGQDRGKRPIPTDQGKEGNNPPLEIRTILGGPLGGESSRKRKAAVREAKLEPREQ

XP_030932439.1 uncharacterized protein LOC115958186 [Quercus lobata]1.1e-2244.68Show/hide
Query:  QGRAEAKEPQGR-AEPKTKYNRYTPLTASLEQVLASIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGQDRG
        +GR E K+ + R   P  +  +YTPL   L+QVL  ++D   LK PE+++ DP++RNRNKYC FH DHGH T EC  L+ +IE LIR+G L+ F+G+D  
Subjt:  QGRAEAKEPQGR-AEPKTKYNRYTPLTASLEQVLASIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGQDRG

Query:  KRPIPTDQGKEGNNPPL-EIRTILGGPLGGESSRKRKAAVR
           +   + +E + PPL EIR I+GG    +SSR RK  ++
Subjt:  KRPIPTDQGKEGNNPPL-EIRTILGGPLGGESSRKRKAAVR

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128057.4e-2544.3Show/hide
Query:  RHEHSSANGQG-RAEAKEPQGRAEPKTKYNRYTPLTASLEQVLASIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIETLIREGYL
        + E S    QG R E ++   + +P  K+ +YT  T  LEQVL  I++  LLK PER+ +   +R++ +YC+FH DHGH T++C  L++E+E LI  GYL
Subjt:  RHEHSSANGQG-RAEAKEPQGRAEPKTKYNRYTPLTASLEQVLASIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIETLIREGYL

Query:  KEFVGQDRGKRPIPTDQGKEGNNPPLEIRTILGGPLGGESSRKRKAAVREAKLEPREQ
        KE+V     + P  T  G+   +P  EIRTI+GGP+  ES RKRK  VREA+   REQ
Subjt:  KEFVGQDRGKRPIPTDQGKEGNNPPLEIRTILGGPLGGESSRKRKAAVREAKLEPREQ

A0A6J1DDR5 uncharacterized protein LOC1110201151.5e-2236.84Show/hide
Query:  REGRGVSVADRHQEDRGKGHQVEDGGRSRHEHSSANGQGRAEAKEPQGRAEPKTKYNRYTPLTASLEQVLASIQDT---NLLKRPERLRSDPDRRNRNKY
        + GR     D+ +  + K  + +   + +   SS++      +     R+ P   Y RYTP T  + ++L +I+++    LLKRPE+LR DP++RN++KY
Subjt:  REGRGVSVADRHQEDRGKGHQVEDGGRSRHEHSSANGQGRAEAKEPQGRAEPKTKYNRYTPLTASLEQVLASIQDT---NLLKRPERLRSDPDRRNRNKY

Query:  CMFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGQDRGKRPIPTDQGKEGNNPPLE------IRTILGGPLGGESSRKRKAAVREAKLE
        C+FH DHGH+T  C +L+ +IE LI++ Y K+FVG+ R       D+ K    PP        I TI GGP GG+S  KRK   REA+ E
Subjt:  CMFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGQDRGKRPIPTDQGKEGNNPPLE------IRTILGGPLGGESSRKRKAAVREAKLE

A0A6J1DWY0 uncharacterized protein LOC1110252937.1e-2846.06Show/hide
Query:  DGGRS--RHEHSSANGQG-RAEAKEPQGRAEPKTKYNRYTPLTASLEQVLASIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIET
        DG R+  + E S    QG R E ++   + +P  K+ +YTP T  +EQVL  I+D  LLK PER+++   +R++ +YC+FH DHGH T++C  L++E+E 
Subjt:  DGGRS--RHEHSSANGQG-RAEAKEPQGRAEPKTKYNRYTPLTASLEQVLASIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIET

Query:  LIREGYLKEFVGQDRGKRPIPTDQGKEGNNPPLEIRTILGGPLGGESSRKRKAAVREAKLEPREQ
        LIR GYLKE+V     + P  T  G+   +P  EIRTI+GGP+  ES RKRKA VREA+   REQ
Subjt:  LIREGYLKEFVGQDRGKRPIPTDQGKEGNNPPLEIRTILGGPLGGESSRKRKAAVREAKLEPREQ

A0A6J1DYL6 uncharacterized protein LOC1110257854.3e-2544.85Show/hide
Query:  DGGRS--RHEHSSANGQG-RAEAKEPQGRAEPKTKYNRYTPLTASLEQVLASIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIET
        DG R+  + E S    QG R E ++   + +P  K+ +YTP T  LEQVL  I+D  LLK PER++    +R++ +YC+FH DH H T++   L++E+E 
Subjt:  DGGRS--RHEHSSANGQG-RAEAKEPQGRAEPKTKYNRYTPLTASLEQVLASIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIET

Query:  LIREGYLKEFVGQDRGKRPIPTDQGKEGNNPPLEIRTILGGPLGGESSRKRKAAVREAKLEPREQ
        LIR GYL+E+V     + P  T  G+   +P  EIRTI+GGP+  ES+RKRKA VREA+   REQ
Subjt:  LIREGYLKEFVGQDRGKRPIPTDQGKEGNNPPLEIRTILGGPLGGESSRKRKAAVREAKLEPREQ

A0A6J1DZ52 uncharacterized protein LOC1110256123.3e-2547.79Show/hide
Query:  GRAEPKTKYNRYTPLTASLEQVLASIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGQDRGKRPIPTDQGKE
        G+ +   K+ +YTP T  LEQVL  I+D  LLK PE +++ P++R++ +YC+FH DHGH T +C  L++E+E LIR+GYLKE+V  D    P   ++  +
Subjt:  GRAEPKTKYNRYTPLTASLEQVLASIQDTNLLKRPERLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGQDRGKRPIPTDQGKE

Query:  GNNPPLEIRTILGGPLGGESSRKRKAAVREAKLEPR
          +P  EIRTI+GG    ES RKRKA+VREA+  PR
Subjt:  GNNPPLEIRTILGGPLGGESSRKRKAAVREAKLEPR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCACGAAAATCAGCCAGTGATAGACGAGGCGAATCCCCTGGTCCGACTCCAAGCCCAAGAGACTGAGATTGCAGCAATTAAGGGGAGGATGAACGAGATGGGGCA
GAACTTGGCCGAAATCCTTAATTTGCTGAAGAAGCCCGAGTCTGTGGAGCACGGGGAAGAGCATCTGCGCAGAGATCCCAAGAAGGGTAAAGGAATAGCGGATGAGGAGG
TAGGAGATTCGGAGAGTGTAACCAGCCGGATGCACCATCCAGTAGATGGTCGGACCCGGAAAGAGGCTGGACCCAGCCACAAAAGGGTCCGCAGAAATTCACCGCCGAAG
TATACAGGGAATAATGACAGGAAAAAGTTGGAGGCTCGGGCAAGGTCTAAGCAGGAGGAGAGAGAGGGCCGAGGAGTTTCTGTAGCCGACCGGCATCAAGAAGACAGAGG
AAAAGGACACCAGGTAGAAGATGGAGGCCGGAGCCGACATGAGCACTCCTCAGCCAATGGCCAAGGCCGAGCAGAGGCCAAGGAGCCGCAGGGTCGCGCAGAGCCAAAAA
CCAAGTATAACAGGTATACGCCGCTAACAGCTTCACTTGAACAGGTCTTGGCCTCAATACAGGATACCAATCTGTTGAAACGTCCAGAAAGGCTGAGGTCAGACCCAGAC
AGGAGAAACAGGAACAAATACTGCATGTTCCATGGAGACCACGGCCACACAACCCGGGAATGCATACAGCTAAGGGATGAAATAGAAACCCTAATCCGAGAGGGCTATCT
CAAGGAATTCGTAGGACAAGACAGAGGGAAAAGACCAATACCGACAGATCAAGGTAAAGAAGGCAACAACCCACCACTTGAGATACGAACAATCCTGGGAGGACCATTGG
GTGGAGAATCGAGTAGAAAACGAAAAGCAGCAGTTCGAGAAGCAAAGTTAGAGCCGAGAGAGCAAGGAATATTGACAAGAAGGGCCAAACAATGCCCGCCTCGGGAAATA
GCCGAGGCCGAGCATTTGAGGGATCGAATCATCCTCTTCCAATGGAGCACTAATTTTCCTCTGTTATGTTTCCTGCCAAAACTTGCACTTGAAGAGAGGCCCGAGAAATT
CCTAGGCCTCCCCAAGCATTTTCCCCAGAAGAGTGTACGCACCCCTGGGATGACCACGATGCTTGAAGAGAGGCCCGGGAAATTCCTAGGCCTCCCCAAGCTTTTTCCCC
AGAAGAGTGTACGCACCCCTGGGATGAATACAGAGCTTGAAGAGAGGCTCGGAAGATTCCTAGGCCTCCCCAAGATTTTTCCCCAAAAGAGTGTACGCACCCCTAGGATG
ACCACGATGCTTGAAGAGAGGCCCGGGAAATTCCTAGGCCTCCCCAAGCTTTTTCCCCACAAGAGTGTACGCACCCCTAGGATGAACACAACGCTTGAAGAGAGGCTCGA
GAAATCCCTAGGCCTCCCCAAGCTTTTTCCTCAAAAGAGTGTACGCACCCCTGGGATGAACACAGTGCTTGAAGAGAGGCTCGGGAAATTCCTAGGCCTCCCCAAGCTTT
TTCCCCAGAAGAGTGTACGCACCCCTGGGATGACCATGATGCTTGAAGAGAGACCCAGGAAATTCCTAGGCCTCCACAAGCTTTTTCCCCAGAAGAGTGTACGCACCCCT
GGGATGAACATAACACTTGAAGAGAGGCTCGGGATTTCCTCGGCCTCCCCAAGTTTCCCCAGAAGAGTGCACCCTTGGGATGGAAAACAAGCAAGCAAACAATGTAGAGG
AGCTGGTCGACCTCATGCCAAGGCCGAAGCCGACCATCCAGAGGCCAAGGCTGAGCTCCACCCTCAAAGGCCCAGACATTTGCAAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCACGAAAATCAGCCAGTGATAGACGAGGCGAATCCCCTGGTCCGACTCCAAGCCCAAGAGACTGAGATTGCAGCAATTAAGGGGAGGATGAACGAGATGGGGCA
GAACTTGGCCGAAATCCTTAATTTGCTGAAGAAGCCCGAGTCTGTGGAGCACGGGGAAGAGCATCTGCGCAGAGATCCCAAGAAGGGTAAAGGAATAGCGGATGAGGAGG
TAGGAGATTCGGAGAGTGTAACCAGCCGGATGCACCATCCAGTAGATGGTCGGACCCGGAAAGAGGCTGGACCCAGCCACAAAAGGGTCCGCAGAAATTCACCGCCGAAG
TATACAGGGAATAATGACAGGAAAAAGTTGGAGGCTCGGGCAAGGTCTAAGCAGGAGGAGAGAGAGGGCCGAGGAGTTTCTGTAGCCGACCGGCATCAAGAAGACAGAGG
AAAAGGACACCAGGTAGAAGATGGAGGCCGGAGCCGACATGAGCACTCCTCAGCCAATGGCCAAGGCCGAGCAGAGGCCAAGGAGCCGCAGGGTCGCGCAGAGCCAAAAA
CCAAGTATAACAGGTATACGCCGCTAACAGCTTCACTTGAACAGGTCTTGGCCTCAATACAGGATACCAATCTGTTGAAACGTCCAGAAAGGCTGAGGTCAGACCCAGAC
AGGAGAAACAGGAACAAATACTGCATGTTCCATGGAGACCACGGCCACACAACCCGGGAATGCATACAGCTAAGGGATGAAATAGAAACCCTAATCCGAGAGGGCTATCT
CAAGGAATTCGTAGGACAAGACAGAGGGAAAAGACCAATACCGACAGATCAAGGTAAAGAAGGCAACAACCCACCACTTGAGATACGAACAATCCTGGGAGGACCATTGG
GTGGAGAATCGAGTAGAAAACGAAAAGCAGCAGTTCGAGAAGCAAAGTTAGAGCCGAGAGAGCAAGGAATATTGACAAGAAGGGCCAAACAATGCCCGCCTCGGGAAATA
GCCGAGGCCGAGCATTTGAGGGATCGAATCATCCTCTTCCAATGGAGCACTAATTTTCCTCTGTTATGTTTCCTGCCAAAACTTGCACTTGAAGAGAGGCCCGAGAAATT
CCTAGGCCTCCCCAAGCATTTTCCCCAGAAGAGTGTACGCACCCCTGGGATGACCACGATGCTTGAAGAGAGGCCCGGGAAATTCCTAGGCCTCCCCAAGCTTTTTCCCC
AGAAGAGTGTACGCACCCCTGGGATGAATACAGAGCTTGAAGAGAGGCTCGGAAGATTCCTAGGCCTCCCCAAGATTTTTCCCCAAAAGAGTGTACGCACCCCTAGGATG
ACCACGATGCTTGAAGAGAGGCCCGGGAAATTCCTAGGCCTCCCCAAGCTTTTTCCCCACAAGAGTGTACGCACCCCTAGGATGAACACAACGCTTGAAGAGAGGCTCGA
GAAATCCCTAGGCCTCCCCAAGCTTTTTCCTCAAAAGAGTGTACGCACCCCTGGGATGAACACAGTGCTTGAAGAGAGGCTCGGGAAATTCCTAGGCCTCCCCAAGCTTT
TTCCCCAGAAGAGTGTACGCACCCCTGGGATGACCATGATGCTTGAAGAGAGACCCAGGAAATTCCTAGGCCTCCACAAGCTTTTTCCCCAGAAGAGTGTACGCACCCCT
GGGATGAACATAACACTTGAAGAGAGGCTCGGGATTTCCTCGGCCTCCCCAAGTTTCCCCAGAAGAGTGCACCCTTGGGATGGAAAACAAGCAAGCAAACAATGTAGAGG
AGCTGGTCGACCTCATGCCAAGGCCGAAGCCGACCATCCAGAGGCCAAGGCTGAGCTCCACCCTCAAAGGCCCAGACATTTGCAAATTTAA
Protein sequenceShow/hide protein sequence
MEHENQPVIDEANPLVRLQAQETEIAAIKGRMNEMGQNLAEILNLLKKPESVEHGEEHLRRDPKKGKGIADEEVGDSESVTSRMHHPVDGRTRKEAGPSHKRVRRNSPPK
YTGNNDRKKLEARARSKQEEREGRGVSVADRHQEDRGKGHQVEDGGRSRHEHSSANGQGRAEAKEPQGRAEPKTKYNRYTPLTASLEQVLASIQDTNLLKRPERLRSDPD
RRNRNKYCMFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGQDRGKRPIPTDQGKEGNNPPLEIRTILGGPLGGESSRKRKAAVREAKLEPREQGILTRRAKQCPPREI
AEAEHLRDRIILFQWSTNFPLLCFLPKLALEERPEKFLGLPKHFPQKSVRTPGMTTMLEERPGKFLGLPKLFPQKSVRTPGMNTELEERLGRFLGLPKIFPQKSVRTPRM
TTMLEERPGKFLGLPKLFPHKSVRTPRMNTTLEERLEKSLGLPKLFPQKSVRTPGMNTVLEERLGKFLGLPKLFPQKSVRTPGMTMMLEERPRKFLGLHKLFPQKSVRTP
GMNITLEERLGISSASPSFPRRVHPWDGKQASKQCRGAGRPHAKAEADHPEAKAELHPQRPRHLQI