; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg019818 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019818
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCCHC-type domain-containing protein
Genome locationscaffold5:35924430..35930092
RNA-Seq ExpressionSpg019818
SyntenySpg019818
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035755.1 uncharacterized protein E6C27_scaffold403G00270 [Cucumis melo var. makuwa]1.6e-6757.55Show/hide
Query:  MRQLESIVPSIRPELEEIGRSKWARAFFVRKRYSMMTTNISESLNSLLMDERELPIILLLEFIRRLMQTWFYDRRCFSSFQRTHLSPSVEKVLRDILKDG
        MRQLE + PS+R ELE +GR KWARAFF RKRY ++TTNISES+NS L ++RELPII LLE IR L+Q WFY+ R   SFQRT LS S E ++R+ L   
Subjt:  MRQLESIVPSIRPELEEIGRSKWARAFFVRKRYSMMTTNISESLNSLLMDERELPIILLLEFIRRLMQTWFYDRRCFSSFQRTHLSPSVEKVLRDILKDG

Query:  RTMDLYHVNQYQFEVHDRNKQFDVDILNRTCTCRQWDLDMIPCSHACLALCSRNLELHLYVDKFYHLSNLNQLYSV-------------------DGIKP
        R+M++Y V+Q++FEVH R +QF V+ILNRTC+CRQWDLD+IPCSHAC+AL +RNL LHLY DKFY++SNL  LY                     DGI P
Subjt:  RTMDLYHVNQYQFEVHDRNKQFDVDILNRTCTCRQWDLDMIPCSHACLALCSRNLELHLYVDKFYHLSNLNQLYSV-------------------DGIKP

Query:  NTNVKRQAGRPKKKRMQSRIETRSRVKCGRCRQVGHNRRSYKNPL
           VKR AGRPKKKR  S +E ++ V+C RC + GHN RS K P+
Subjt:  NTNVKRQAGRPKKKRMQSRIETRSRVKCGRCRQVGHNRRSYKNPL

KAA0064137.1 MuDRA-like transposase [Cucumis melo var. makuwa]1.0e-6655.92Show/hide
Query:  MRQLESIVPSIRPELEEIGRSKWARAFFVRKRYSMMTTNISESLNSLLMDERELPIILLLEFIRRLMQTWFYDRRCFSSFQRTHLSPSVEKVLRDILKDG
        MRQL+ + PS+R ELE +GR KWARAFF RKRY +MTTNISES+NS L ++RELP+I LLE +R L++ WFY+RR   SFQRT LS   E V+R+ L+  
Subjt:  MRQLESIVPSIRPELEEIGRSKWARAFFVRKRYSMMTTNISESLNSLLMDERELPIILLLEFIRRLMQTWFYDRRCFSSFQRTHLSPSVEKVLRDILKDG

Query:  RTMDLYHVNQYQFEVHDRNKQFDVDILNRTCTCRQWDLDMIPCSHACLALCSRNLELHLYVDKFYHLSNLNQLYSV-------------------DGIKP
        R+M++Y V+Q++FEVH R +QF V+ILNRTC+CRQWDLD+IPCSHAC+AL + NL LHLY DKFY++SNL  LY                     DGI P
Subjt:  RTMDLYHVNQYQFEVHDRNKQFDVDILNRTCTCRQWDLDMIPCSHACLALCSRNLELHLYVDKFYHLSNLNQLYSV-------------------DGIKP

Query:  NTNVKRQAGRPKKKRMQSRIETRSRVKCGRCRQVGHNRRSYKNPL
         + VKR AGRPKKKR  S +E ++ V+C RC + GH+ RS K P+
Subjt:  NTNVKRQAGRPKKKRMQSRIETRSRVKCGRCRQVGHNRRSYKNPL

XP_008442298.1 PREDICTED: uncharacterized protein LOC103486212 [Cucumis melo]1.6e-6757.55Show/hide
Query:  MRQLESIVPSIRPELEEIGRSKWARAFFVRKRYSMMTTNISESLNSLLMDERELPIILLLEFIRRLMQTWFYDRRCFSSFQRTHLSPSVEKVLRDILKDG
        MRQLE + PS+R ELE +GR KWARAFF RKRY ++TTNISES+NS L ++RELPII LLE IR L+Q WFY+ R   SFQRT LS S E ++R+ L   
Subjt:  MRQLESIVPSIRPELEEIGRSKWARAFFVRKRYSMMTTNISESLNSLLMDERELPIILLLEFIRRLMQTWFYDRRCFSSFQRTHLSPSVEKVLRDILKDG

Query:  RTMDLYHVNQYQFEVHDRNKQFDVDILNRTCTCRQWDLDMIPCSHACLALCSRNLELHLYVDKFYHLSNLNQLYSV-------------------DGIKP
        R+M++Y V+Q++FEVH R +QF V+ILNRTC+CRQWDLD+IPCSHAC+AL +RNL LHLY DKFY++SNL  LY                     DGI P
Subjt:  RTMDLYHVNQYQFEVHDRNKQFDVDILNRTCTCRQWDLDMIPCSHACLALCSRNLELHLYVDKFYHLSNLNQLYSV-------------------DGIKP

Query:  NTNVKRQAGRPKKKRMQSRIETRSRVKCGRCRQVGHNRRSYKNPL
           VKR AGRPKKKR  S +E ++ V+C RC + GHN RS K P+
Subjt:  NTNVKRQAGRPKKKRMQSRIETRSRVKCGRCRQVGHNRRSYKNPL

XP_008444294.1 PREDICTED: uncharacterized protein LOC103487663 [Cucumis melo]1.0e-6655.92Show/hide
Query:  MRQLESIVPSIRPELEEIGRSKWARAFFVRKRYSMMTTNISESLNSLLMDERELPIILLLEFIRRLMQTWFYDRRCFSSFQRTHLSPSVEKVLRDILKDG
        MRQL+ + PS+R ELE +GR KWARAFF RKRY +MTTNISES+NS L ++RELP+I LLE +R L++ WFY+RR   SFQRT LS   E V+R+ L+  
Subjt:  MRQLESIVPSIRPELEEIGRSKWARAFFVRKRYSMMTTNISESLNSLLMDERELPIILLLEFIRRLMQTWFYDRRCFSSFQRTHLSPSVEKVLRDILKDG

Query:  RTMDLYHVNQYQFEVHDRNKQFDVDILNRTCTCRQWDLDMIPCSHACLALCSRNLELHLYVDKFYHLSNLNQLYSV-------------------DGIKP
        R+M++Y V+Q++FEVH R +QF V+ILNRTC+CRQWDLD+IPCSHAC+AL + NL LHLY DKFY++SNL  LY                     DGI P
Subjt:  RTMDLYHVNQYQFEVHDRNKQFDVDILNRTCTCRQWDLDMIPCSHACLALCSRNLELHLYVDKFYHLSNLNQLYSV-------------------DGIKP

Query:  NTNVKRQAGRPKKKRMQSRIETRSRVKCGRCRQVGHNRRSYKNPL
         + VKR AGRPKKKR  S +E ++ V+C RC + GH+ RS K P+
Subjt:  NTNVKRQAGRPKKKRMQSRIETRSRVKCGRCRQVGHNRRSYKNPL

XP_008455803.1 PREDICTED: uncharacterized protein LOC103495899 [Cucumis melo]2.3e-6656.33Show/hide
Query:  MRQLESIVPSIRPELEEIGRSKWARAFFVRKRYSMMTTNISESLNSLLMDERELPIILLLEFIRRLMQTWFYDRRCFSSFQRTHLSPSVEKVLRDILKDG
        MRQLE + PS+R ELE +GR KWARAFF RKRY ++TTNISES+NS L ++RELP+I LLE IR L+Q WFY+RR   SFQRT LS   E ++R+ L   
Subjt:  MRQLESIVPSIRPELEEIGRSKWARAFFVRKRYSMMTTNISESLNSLLMDERELPIILLLEFIRRLMQTWFYDRRCFSSFQRTHLSPSVEKVLRDILKDG

Query:  RTMDLYHVNQYQFEVHDRNKQFDVDILNRTCTCRQWDLDMIPCSHACLALCSRNLELHLYVDKFYHLSNLNQLYSV-------------------DGIKP
         +M++Y V+Q++FEVH R +QF V+ILNRTC+CRQWDLD+IPCSHAC AL +RNL LHLY DKFY++SNL  LY                     DGI P
Subjt:  RTMDLYHVNQYQFEVHDRNKQFDVDILNRTCTCRQWDLDMIPCSHACLALCSRNLELHLYVDKFYHLSNLNQLYSV-------------------DGIKP

Query:  NTNVKRQAGRPKKKRMQSRIETRSRVKCGRCRQVGHNRRSYKNPL
           VKR AGRPKKKR  S +E ++ V+C RC + GHN +S K P+
Subjt:  NTNVKRQAGRPKKKRMQSRIETRSRVKCGRCRQVGHNRRSYKNPL

TrEMBL top hitse value%identityAlignment
A0A1S3B5C9 uncharacterized protein LOC1034862127.6e-6857.55Show/hide
Query:  MRQLESIVPSIRPELEEIGRSKWARAFFVRKRYSMMTTNISESLNSLLMDERELPIILLLEFIRRLMQTWFYDRRCFSSFQRTHLSPSVEKVLRDILKDG
        MRQLE + PS+R ELE +GR KWARAFF RKRY ++TTNISES+NS L ++RELPII LLE IR L+Q WFY+ R   SFQRT LS S E ++R+ L   
Subjt:  MRQLESIVPSIRPELEEIGRSKWARAFFVRKRYSMMTTNISESLNSLLMDERELPIILLLEFIRRLMQTWFYDRRCFSSFQRTHLSPSVEKVLRDILKDG

Query:  RTMDLYHVNQYQFEVHDRNKQFDVDILNRTCTCRQWDLDMIPCSHACLALCSRNLELHLYVDKFYHLSNLNQLYSV-------------------DGIKP
        R+M++Y V+Q++FEVH R +QF V+ILNRTC+CRQWDLD+IPCSHAC+AL +RNL LHLY DKFY++SNL  LY                     DGI P
Subjt:  RTMDLYHVNQYQFEVHDRNKQFDVDILNRTCTCRQWDLDMIPCSHACLALCSRNLELHLYVDKFYHLSNLNQLYSV-------------------DGIKP

Query:  NTNVKRQAGRPKKKRMQSRIETRSRVKCGRCRQVGHNRRSYKNPL
           VKR AGRPKKKR  S +E ++ V+C RC + GHN RS K P+
Subjt:  NTNVKRQAGRPKKKRMQSRIETRSRVKCGRCRQVGHNRRSYKNPL

A0A1S3BA43 uncharacterized protein LOC1034876634.9e-6755.92Show/hide
Query:  MRQLESIVPSIRPELEEIGRSKWARAFFVRKRYSMMTTNISESLNSLLMDERELPIILLLEFIRRLMQTWFYDRRCFSSFQRTHLSPSVEKVLRDILKDG
        MRQL+ + PS+R ELE +GR KWARAFF RKRY +MTTNISES+NS L ++RELP+I LLE +R L++ WFY+RR   SFQRT LS   E V+R+ L+  
Subjt:  MRQLESIVPSIRPELEEIGRSKWARAFFVRKRYSMMTTNISESLNSLLMDERELPIILLLEFIRRLMQTWFYDRRCFSSFQRTHLSPSVEKVLRDILKDG

Query:  RTMDLYHVNQYQFEVHDRNKQFDVDILNRTCTCRQWDLDMIPCSHACLALCSRNLELHLYVDKFYHLSNLNQLYSV-------------------DGIKP
        R+M++Y V+Q++FEVH R +QF V+ILNRTC+CRQWDLD+IPCSHAC+AL + NL LHLY DKFY++SNL  LY                     DGI P
Subjt:  RTMDLYHVNQYQFEVHDRNKQFDVDILNRTCTCRQWDLDMIPCSHACLALCSRNLELHLYVDKFYHLSNLNQLYSV-------------------DGIKP

Query:  NTNVKRQAGRPKKKRMQSRIETRSRVKCGRCRQVGHNRRSYKNPL
         + VKR AGRPKKKR  S +E ++ V+C RC + GH+ RS K P+
Subjt:  NTNVKRQAGRPKKKRMQSRIETRSRVKCGRCRQVGHNRRSYKNPL

A0A5A7SJA0 Uncharacterized protein1.1e-6656.33Show/hide
Query:  MRQLESIVPSIRPELEEIGRSKWARAFFVRKRYSMMTTNISESLNSLLMDERELPIILLLEFIRRLMQTWFYDRRCFSSFQRTHLSPSVEKVLRDILKDG
        MRQLE + PS+R ELE +GR KWARAFF RKRY ++TTNISES+NS L ++RELP+I LLE IR L+Q WFY+RR   SFQRT LS   E ++R+ L   
Subjt:  MRQLESIVPSIRPELEEIGRSKWARAFFVRKRYSMMTTNISESLNSLLMDERELPIILLLEFIRRLMQTWFYDRRCFSSFQRTHLSPSVEKVLRDILKDG

Query:  RTMDLYHVNQYQFEVHDRNKQFDVDILNRTCTCRQWDLDMIPCSHACLALCSRNLELHLYVDKFYHLSNLNQLYSV-------------------DGIKP
         +M++Y V+Q++FEVH R +QF V+ILNRTC+CRQWDLD+IPCSHAC AL +RNL LHLY DKFY++SNL  LY                     DGI P
Subjt:  RTMDLYHVNQYQFEVHDRNKQFDVDILNRTCTCRQWDLDMIPCSHACLALCSRNLELHLYVDKFYHLSNLNQLYSV-------------------DGIKP

Query:  NTNVKRQAGRPKKKRMQSRIETRSRVKCGRCRQVGHNRRSYKNPL
           VKR AGRPKKKR  S +E ++ V+C RC + GHN +S K P+
Subjt:  NTNVKRQAGRPKKKRMQSRIETRSRVKCGRCRQVGHNRRSYKNPL

A0A5A7T2S1 Uncharacterized protein7.6e-6857.55Show/hide
Query:  MRQLESIVPSIRPELEEIGRSKWARAFFVRKRYSMMTTNISESLNSLLMDERELPIILLLEFIRRLMQTWFYDRRCFSSFQRTHLSPSVEKVLRDILKDG
        MRQLE + PS+R ELE +GR KWARAFF RKRY ++TTNISES+NS L ++RELPII LLE IR L+Q WFY+ R   SFQRT LS S E ++R+ L   
Subjt:  MRQLESIVPSIRPELEEIGRSKWARAFFVRKRYSMMTTNISESLNSLLMDERELPIILLLEFIRRLMQTWFYDRRCFSSFQRTHLSPSVEKVLRDILKDG

Query:  RTMDLYHVNQYQFEVHDRNKQFDVDILNRTCTCRQWDLDMIPCSHACLALCSRNLELHLYVDKFYHLSNLNQLYSV-------------------DGIKP
        R+M++Y V+Q++FEVH R +QF V+ILNRTC+CRQWDLD+IPCSHAC+AL +RNL LHLY DKFY++SNL  LY                     DGI P
Subjt:  RTMDLYHVNQYQFEVHDRNKQFDVDILNRTCTCRQWDLDMIPCSHACLALCSRNLELHLYVDKFYHLSNLNQLYSV-------------------DGIKP

Query:  NTNVKRQAGRPKKKRMQSRIETRSRVKCGRCRQVGHNRRSYKNPL
           VKR AGRPKKKR  S +E ++ V+C RC + GHN RS K P+
Subjt:  NTNVKRQAGRPKKKRMQSRIETRSRVKCGRCRQVGHNRRSYKNPL

A0A5A7VAU3 MuDRA-like transposase4.9e-6755.92Show/hide
Query:  MRQLESIVPSIRPELEEIGRSKWARAFFVRKRYSMMTTNISESLNSLLMDERELPIILLLEFIRRLMQTWFYDRRCFSSFQRTHLSPSVEKVLRDILKDG
        MRQL+ + PS+R ELE +GR KWARAFF RKRY +MTTNISES+NS L ++RELP+I LLE +R L++ WFY+RR   SFQRT LS   E V+R+ L+  
Subjt:  MRQLESIVPSIRPELEEIGRSKWARAFFVRKRYSMMTTNISESLNSLLMDERELPIILLLEFIRRLMQTWFYDRRCFSSFQRTHLSPSVEKVLRDILKDG

Query:  RTMDLYHVNQYQFEVHDRNKQFDVDILNRTCTCRQWDLDMIPCSHACLALCSRNLELHLYVDKFYHLSNLNQLYSV-------------------DGIKP
        R+M++Y V+Q++FEVH R +QF V+ILNRTC+CRQWDLD+IPCSHAC+AL + NL LHLY DKFY++SNL  LY                     DGI P
Subjt:  RTMDLYHVNQYQFEVHDRNKQFDVDILNRTCTCRQWDLDMIPCSHACLALCSRNLELHLYVDKFYHLSNLNQLYSV-------------------DGIKP

Query:  NTNVKRQAGRPKKKRMQSRIETRSRVKCGRCRQVGHNRRSYKNPL
         + VKR AGRPKKKR  S +E ++ V+C RC + GH+ RS K P+
Subjt:  NTNVKRQAGRPKKKRMQSRIETRSRVKCGRCRQVGHNRRSYKNPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGACAGTTAGAGTCTATAGTTCCTTCAATTAGGCCAGAGTTAGAAGAGATTGGTCGTTCTAAATGGGCAAGGGCATTTTTTGTTCGAAAAAGATATTCAATGATGAC
GACTAATATATCTGAAAGCTTGAATTCTCTGTTGATGGATGAACGTGAGTTACCTATTATTCTTCTCCTTGAGTTTATACGGAGATTGATGCAAACATGGTTTTACGACC
GTCGATGTTTCTCTTCCTTTCAACGAACACACCTTTCTCCATCGGTTGAAAAAGTTCTCAGAGACATTCTGAAAGATGGTCGGACAATGGATCTATATCATGTTAACCAG
TATCAATTTGAGGTTCATGATCGCAACAAACAATTTGATGTCGACATTCTCAATCGAACATGTACTTGCAGGCAATGGGATTTGGACATGATTCCATGTAGTCATGCATG
TCTTGCTTTATGTAGCAGGAACCTTGAACTACACCTTTATGTAGATAAGTTTTACCATCTTTCAAATTTGAACCAGTTATACAGTGTAGATGGCATAAAACCCAACACTA
ACGTCAAGCGTCAAGCTGGTAGGCCGAAGAAGAAGAGAATGCAATCTCGTATTGAAACAAGATCTAGAGTAAAGTGTGGTCGATGTCGTCAAGTCGGACACAATCGTAGA
TCTTATAAGAATCCTCTATCAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGACAGTTAGAGTCTATAGTTCCTTCAATTAGGCCAGAGTTAGAAGAGATTGGTCGTTCTAAATGGGCAAGGGCATTTTTTGTTCGAAAAAGATATTCAATGATGAC
GACTAATATATCTGAAAGCTTGAATTCTCTGTTGATGGATGAACGTGAGTTACCTATTATTCTTCTCCTTGAGTTTATACGGAGATTGATGCAAACATGGTTTTACGACC
GTCGATGTTTCTCTTCCTTTCAACGAACACACCTTTCTCCATCGGTTGAAAAAGTTCTCAGAGACATTCTGAAAGATGGTCGGACAATGGATCTATATCATGTTAACCAG
TATCAATTTGAGGTTCATGATCGCAACAAACAATTTGATGTCGACATTCTCAATCGAACATGTACTTGCAGGCAATGGGATTTGGACATGATTCCATGTAGTCATGCATG
TCTTGCTTTATGTAGCAGGAACCTTGAACTACACCTTTATGTAGATAAGTTTTACCATCTTTCAAATTTGAACCAGTTATACAGTGTAGATGGCATAAAACCCAACACTA
ACGTCAAGCGTCAAGCTGGTAGGCCGAAGAAGAAGAGAATGCAATCTCGTATTGAAACAAGATCTAGAGTAAAGTGTGGTCGATGTCGTCAAGTCGGACACAATCGTAGA
TCTTATAAGAATCCTCTATCAAATTGA
Protein sequenceShow/hide protein sequence
MRQLESIVPSIRPELEEIGRSKWARAFFVRKRYSMMTTNISESLNSLLMDERELPIILLLEFIRRLMQTWFYDRRCFSSFQRTHLSPSVEKVLRDILKDGRTMDLYHVNQ
YQFEVHDRNKQFDVDILNRTCTCRQWDLDMIPCSHACLALCSRNLELHLYVDKFYHLSNLNQLYSVDGIKPNTNVKRQAGRPKKKRMQSRIETRSRVKCGRCRQVGHNRR
SYKNPLSN