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Spg019845 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019845
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionG-box-binding factor 1-like
Genome locationscaffold5:28603235..28605000
RNA-Seq ExpressionSpg019845
SyntenySpg019845
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046503.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]5.4e-1051.95Show/hide
Query:  MGVLGGPHYIVGLVNVGCTGRALHNVDRSC---------STFQEGQRVSLEEDDVRWLHAIFRTKLAGGLGGGVTLA
        MGVLG   YIV LVNVGCTG ALHN D SC         S  Q+ +++ ++E DV  LH +FR+KL G  G GVTL+
Subjt:  MGVLGGPHYIVGLVNVGCTGRALHNVDRSC---------STFQEGQRVSLEEDDVRWLHAIFRTKLAGGLGGGVTLA

TYK02142.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]5.1e-0851.39Show/hide
Query:  MGVLGGPHYIVGLVNVGCTGRALHNVDRSCSTFQ--------------EGQRVSLEEDDVRWLHAIFRTKLA
        MGVL GP+YIV LVNVGCTG ALHNVD SC + +                ++V LEE D   LHA+F+ KLA
Subjt:  MGVLGGPHYIVGLVNVGCTGRALHNVDRSCSTFQ--------------EGQRVSLEEDDVRWLHAIFRTKLA

TYK08801.1 hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa]1.9e-1041.07Show/hide
Query:  KTMGVLGGPHYIVGLVNVGCTGRALHNVDRSC-----------------------------------STFQEGQRVSLE--------EDDVRWLHAIFRT
        K  GV GGPHYIVGLVNVGCTGR LH++DRS                                    S  +   R+  E        E+DV WLHA+FR 
Subjt:  KTMGVLGGPHYIVGLVNVGCTGRALHNVDRSC-----------------------------------STFQEGQRVSLE--------EDDVRWLHAIFRT

Query:  KLAGGLGGGVTL
        K+AGG GGGVT+
Subjt:  KLAGGLGGGVTL

TYK21003.1 G-box-binding factor 1-like [Cucumis melo var. makuwa]8.1e-0637.5Show/hide
Query:  MTKTMGVLGGPHYIVGLVNVGCTGRALHNVDRSCSTFQEGQRVSLEEDDVRWLHAIFRTKLAGGLGGGVTLAHALIHLYITRIRAIKRDAFSLSLLHLLH
        MTKTMG+LG PHYIV L+NVGC G ALHNVD SC        VS     + +  A   +K        + + H      ++++R+I      LS   ++ 
Subjt:  MTKTMGVLGGPHYIVGLVNVGCTGRALHNVDRSCSTFQEGQRVSLEEDDVRWLHAIFRTKLAGGLGGGVTLAHALIHLYITRIRAIKRDAFSLSLLHLLH

Query:  LLSA
        +LSA
Subjt:  LLSA

TrEMBL top hitse value%identityAlignment
A0A5D3BRV3 Retrovirus-related Pol polyprotein from transposon TNT 1-942.6e-1051.95Show/hide
Query:  MGVLGGPHYIVGLVNVGCTGRALHNVDRSC---------STFQEGQRVSLEEDDVRWLHAIFRTKLAGGLGGGVTLA
        MGVLG   YIV LVNVGCTG ALHN D SC         S  Q+ +++ ++E DV  LH +FR+KL G  G GVTL+
Subjt:  MGVLGGPHYIVGLVNVGCTGRALHNVDRSC---------STFQEGQRVSLEEDDVRWLHAIFRTKLAGGLGGGVTLA

A0A5D3BTL2 CACTA en-spm transposon protein2.5e-0851.39Show/hide
Query:  MGVLGGPHYIVGLVNVGCTGRALHNVDRSCSTFQ--------------EGQRVSLEEDDVRWLHAIFRTKLA
        MGVL GP+YIV LVNVGCTG ALHNVD SC + +                ++V LEE D   LHA+F+ KLA
Subjt:  MGVLGGPHYIVGLVNVGCTGRALHNVDRSCSTFQ--------------EGQRVSLEEDDVRWLHAIFRTKLA

A0A5D3CAC6 Uncharacterized protein9.0e-1141.07Show/hide
Query:  KTMGVLGGPHYIVGLVNVGCTGRALHNVDRSC-----------------------------------STFQEGQRVSLE--------EDDVRWLHAIFRT
        K  GV GGPHYIVGLVNVGCTGR LH++DRS                                    S  +   R+  E        E+DV WLHA+FR 
Subjt:  KTMGVLGGPHYIVGLVNVGCTGRALHNVDRSC-----------------------------------STFQEGQRVSLE--------EDDVRWLHAIFRT

Query:  KLAGGLGGGVTL
        K+AGG GGGVT+
Subjt:  KLAGGLGGGVTL

A0A5D3DBQ7 G-box-binding factor 1-like3.9e-0637.5Show/hide
Query:  MTKTMGVLGGPHYIVGLVNVGCTGRALHNVDRSCSTFQEGQRVSLEEDDVRWLHAIFRTKLAGGLGGGVTLAHALIHLYITRIRAIKRDAFSLSLLHLLH
        MTKTMG+LG PHYIV L+NVGC G ALHNVD SC        VS     + +  A   +K        + + H      ++++R+I      LS   ++ 
Subjt:  MTKTMGVLGGPHYIVGLVNVGCTGRALHNVDRSCSTFQEGQRVSLEEDDVRWLHAIFRTKLAGGLGGGVTLAHALIHLYITRIRAIKRDAFSLSLLHLLH

Query:  LLSA
        +LSA
Subjt:  LLSA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTCTACGTT
TCAGGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTTCGTTGGCTTCACGCCATCTTCCGGACTAAGCTAGCAGGTGGTCTGGGAGGGGGTGTGACACTTGCGCATG
CCCTGATTCATCTATACATTACTCGCATTAGAGCTATAAAAAGGGATGCGTTTTCTCTTTCACTTCTTCATCTTCTTCATCTTCTTAGTGCGAAAACCCTAAACCCTTAC
TTTCTCTCTCTCTCGCGAAGCTTCTCTCTGTTTTCTCCGAGAACCACTATGTCCGACTCACAAAACCTCTCCATCGCTGGCTACGCAGACAATGCACCTCCATCATCGCC
GGAGGTGGAAGGGCCTCATAGGGATGTCATCATTTCCTCTGACGAAGACGATGACAACCAACAAAACGATAATCGCATGGAGGAAGGAGAACCGAAAGTCATCGACGGAG
AATAG
mRNA sequenceShow/hide mRNA sequence
ATGACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTCTACGTT
TCAGGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTTCGTTGGCTTCACGCCATCTTCCGGACTAAGCTAGCAGGTGGTCTGGGAGGGGGTGTGACACTTGCGCATG
CCCTGATTCATCTATACATTACTCGCATTAGAGCTATAAAAAGGGATGCGTTTTCTCTTTCACTTCTTCATCTTCTTCATCTTCTTAGTGCGAAAACCCTAAACCCTTAC
TTTCTCTCTCTCTCGCGAAGCTTCTCTCTGTTTTCTCCGAGAACCACTATGTCCGACTCACAAAACCTCTCCATCGCTGGCTACGCAGACAATGCACCTCCATCATCGCC
GGAGGTGGAAGGGCCTCATAGGGATGTCATCATTTCCTCTGACGAAGACGATGACAACCAACAAAACGATAATCGCATGGAGGAAGGAGAACCGAAAGTCATCGACGGAG
AATAG
Protein sequenceShow/hide protein sequence
MTKTMGVLGGPHYIVGLVNVGCTGRALHNVDRSCSTFQEGQRVSLEEDDVRWLHAIFRTKLAGGLGGGVTLAHALIHLYITRIRAIKRDAFSLSLLHLLHLLSAKTLNPY
FLSLSRSFSLFSPRTTMSDSQNLSIAGYADNAPPSSPEVEGPHRDVIISSDEDDDNQQNDNRMEEGEPKVIDGE