; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg019855 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019855
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationscaffold5:35041114..35054276
RNA-Seq ExpressionSpg019855
SyntenySpg019855
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]1.2e-0926.75Show/hide
Query:  FVKNLARVKYCKMLKRNFLLERGF------GEELPHFLRAGIINHGWVQFCTKPEPANSHMVREFYANIDEGKGFQVLVRGVVVDWSLGAINSLFNLQ--
        FV   A+  Y  +  R    E GF         L   +   +  H W +F   P P N+ +V+EFY+NI E     V+VRG+ + ++  AIN  F LQ  
Subjt:  FVKNLARVKYCKMLKRNFLLERGF------GEELPHFLRAGIINHGWVQFCTKPEPANSHMVREFYANIDEGKGFQVLVRGVVVDWSLGAINSLFNLQ--

Query:  -----------DFPLMQAIMK------WRW---------------------------HQQMSSSTRLSLS---------------IDVGKIISREIHNCW
                   D    Q I++       RW                           H+ M +S   ++S               ID+GKII    H C 
Subjt:  -----------DFPLMQAIMK------WRW---------------------------HQQMSSSTRLSLS---------------IDVGKIISREIHNCW

Query:  RKKFSTLFFPNTITMLCRRARVPKSKDD
        +++ S L FPN IT LCR+ +V +   D
Subjt:  RKKFSTLFFPNTITMLCRRARVPKSKDD

KAE8725369.1 hypothetical protein F3Y22_tig00008957pilonHSYRG00158 [Hibiscus syriacus]1.2e-0927.31Show/hide
Query:  IINHGWVQFCTKPEPANSHMVREFYANIDEGKGFQVLVRGVVVDWSLGAINSLFNLQ-------------DFPLMQAIMK------WRWH-QQMSSSTRL
        +  H W  F   P   N+ +V+EFY+NI E   + V+V G+ + ++  AIN  F LQ             D    Q I++       +W+ QQMS  T  
Subjt:  IINHGWVQFCTKPEPANSHMVREFYANIDEGKGFQVLVRGVVVDWSLGAINSLFNLQ-------------DFPLMQAIMK------WRWH-QQMSSSTRL

Query:  SLSIDVGKIISREIHNCWRKKFSTLFFPNTITMLCRRARVPKSKDDMKL-----IHRVQEQLQLVFIRLEFIER--------------------------
           +D  +++  ++H C ++  S L FPN I  LCR+ +VP+   D  L     I +V+  L L +  L+  E+                          
Subjt:  SLSIDVGKIISREIHNCWRKKFSTLFFPNTITMLCRRARVPKSKDDMKL-----IHRVQEQLQLVFIRLEFIER--------------------------

Query:  ----------QLQTYWSYAKRRDATSRKALEENFSKPYQAFLVFPDDLM
                  +L TY++YAK RDA    AL E         L+FP+ L+
Subjt:  ----------QLQTYWSYAKRRDATSRKALEENFSKPYQAFLVFPDDLM

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]8.3e-1130.15Show/hide
Query:  ELPHFLRAGIINHGWVQFCTKPEPANSHMVREFYANIDEGKGFQVLVRGVVVDWSLGAINSLFNLQD---------------------------------
        +LP F+   I  H W QFC  PE     +VREFYAN+ +     V VRGV V WS  AIN++F L D                                 
Subjt:  ELPHFLRAGIINHGWVQFCTKPEPANSHMVREFYANIDEGKGFQVLVRGVVVDWSLGAINSLFNLQD---------------------------------

Query:  --------------------FPLMQAIMKWRWHQQMSSSTRLSL--------SIDVGKIISREIHNCWRKKFSTLFFPNTITMLCRRARVPKSKDDMKL
                            F  +++ +    H +  S  R+ L        SI+VG++I  EI  C  +K   LFFP+ IT LCR AR P   ++ KL
Subjt:  --------------------FPLMQAIMKWRWHQQMSSSTRLSL--------SIDVGKIISREIHNCWRKKFSTLFFPNTITMLCRRARVPKSKDDMKL

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.9e-1525.4Show/hide
Query:  ELPHFLRAGIINHGWVQFCTKPEPANSHMVREFYANIDEGKGFQVLVRGVVVDWSLGAINSLFNLQD-----------------FPLMQAI----MKWR-
        +LP F+   I  H W QFC  PE     +VREFYAN+ + +   V VRGV V WS  AIN++F L D                   +++ +     +W  
Subjt:  ELPHFLRAGIINHGWVQFCTKPEPANSHMVREFYANIDEGKGFQVLVRGVVVDWSLGAINSLFNLQD-----------------FPLMQAI----MKWR-

Query:  -------------------WHQQMSS--------------------STRLSLSIDVGKIISREIHNCWRKKFSTLFFPNTITMLCRRARVPKSKDDMKL-
                           W+  + S                    S  +  SI+VG++I  EI  C  +K   LFFP+ IT LCR AR P   ++ KL 
Subjt:  -------------------WHQQMSS--------------------STRLSLSIDVGKIISREIHNCWRKKFSTLFFPNTITMLCRRARVPKSKDDMKL-

Query:  ---------IHRV-----------------------------------------QEQLQLVFIR--LEFIERQLQTYWSYAKRRDATSRKALEENFSKPY
                 + R+                                         Q+++Q   +   L+   +Q Q +W+Y+K RD   +KAL+ NF++P 
Subjt:  ---------IHRV-----------------------------------------QEQLQLVFIR--LEFIERQLQTYWSYAKRRDATSRKALEENFSKPY

Query:  QAFLVFPDDLM
          F  FP +++
Subjt:  QAFLVFPDDLM

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]5.4e-1028.17Show/hide
Query:  LKRNFLLERGFGEELPHFLRAGIINHGWVQFCTKPEPANSHMVREFYANIDEGKGFQVLVRGVVVDWSLGAINSLFNLQDFPLMQ---------------
        +++ F+ +     E P F+   II H W  FC  PE     +VREFY N+       V +RGV V  S+ AIN++F+L D P+ +               
Subjt:  LKRNFLLERGFGEELPHFLRAGIINHGWVQFCTKPEPANSHMVREFYANIDEGKGFQVLVRGVVVDWSLGAINSLFNLQDFPLMQ---------------

Query:  -----AIMKWRW----------------------------------HQQMSSSTRLSL--------SIDVGKIISREIHNCWRKKFSTLFFPNTITMLCR
             AI+   W                                  H +  S   +SL        SI+VG++I REI  C  +K   LFFP+ IT +CR
Subjt:  -----AIMKWRW----------------------------------HQQMSSSTRLSL--------SIDVGKIISREIHNCWRKKFSTLFFPNTITMLCR

Query:  RARVPKSKDDMKL
          R P   ++ KL
Subjt:  RARVPKSKDDMKL

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)4.0e-1130.15Show/hide
Query:  ELPHFLRAGIINHGWVQFCTKPEPANSHMVREFYANIDEGKGFQVLVRGVVVDWSLGAINSLFNLQD---------------------------------
        +LP F+   I  H W QFC  PE     +VREFYAN+ +     V VRGV V WS  AIN++F L D                                 
Subjt:  ELPHFLRAGIINHGWVQFCTKPEPANSHMVREFYANIDEGKGFQVLVRGVVVDWSLGAINSLFNLQD---------------------------------

Query:  --------------------FPLMQAIMKWRWHQQMSSSTRLSL--------SIDVGKIISREIHNCWRKKFSTLFFPNTITMLCRRARVPKSKDDMKL
                            F  +++ +    H +  S  R+ L        SI+VG++I  EI  C  +K   LFFP+ IT LCR AR P   ++ KL
Subjt:  --------------------FPLMQAIMKWRWHQQMSSSTRLSL--------SIDVGKIISREIHNCWRKKFSTLFFPNTITMLCRRARVPKSKDDMKL

A0A2P5BCG4 Uncharacterized protein (Fragment)9.3e-1625.4Show/hide
Query:  ELPHFLRAGIINHGWVQFCTKPEPANSHMVREFYANIDEGKGFQVLVRGVVVDWSLGAINSLFNLQD-----------------FPLMQAI----MKWR-
        +LP F+   I  H W QFC  PE     +VREFYAN+ + +   V VRGV V WS  AIN++F L D                   +++ +     +W  
Subjt:  ELPHFLRAGIINHGWVQFCTKPEPANSHMVREFYANIDEGKGFQVLVRGVVVDWSLGAINSLFNLQD-----------------FPLMQAI----MKWR-

Query:  -------------------WHQQMSS--------------------STRLSLSIDVGKIISREIHNCWRKKFSTLFFPNTITMLCRRARVPKSKDDMKL-
                           W+  + S                    S  +  SI+VG++I  EI  C  +K   LFFP+ IT LCR AR P   ++ KL 
Subjt:  -------------------WHQQMSS--------------------STRLSLSIDVGKIISREIHNCWRKKFSTLFFPNTITMLCRRARVPKSKDDMKL-

Query:  ---------IHRV-----------------------------------------QEQLQLVFIR--LEFIERQLQTYWSYAKRRDATSRKALEENFSKPY
                 + R+                                         Q+++Q   +   L+   +Q Q +W+Y+K RD   +KAL+ NF++P 
Subjt:  ---------IHRV-----------------------------------------QEQLQLVFIR--LEFIERQLQTYWSYAKRRDATSRKALEENFSKPY

Query:  QAFLVFPDDLM
          F  FP +++
Subjt:  QAFLVFPDDLM

A0A2P5DAQ2 Uncharacterized protein2.6e-1028.17Show/hide
Query:  LKRNFLLERGFGEELPHFLRAGIINHGWVQFCTKPEPANSHMVREFYANIDEGKGFQVLVRGVVVDWSLGAINSLFNLQDFPLMQ---------------
        +++ F+ +     E P F+   II H W  FC  PE     +VREFY N+       V +RGV V  S+ AIN++F+L D P+ +               
Subjt:  LKRNFLLERGFGEELPHFLRAGIINHGWVQFCTKPEPANSHMVREFYANIDEGKGFQVLVRGVVVDWSLGAINSLFNLQDFPLMQ---------------

Query:  -----AIMKWRW----------------------------------HQQMSSSTRLSL--------SIDVGKIISREIHNCWRKKFSTLFFPNTITMLCR
             AI+   W                                  H +  S   +SL        SI+VG++I REI  C  +K   LFFP+ IT +CR
Subjt:  -----AIMKWRW----------------------------------HQQMSSSTRLSL--------SIDVGKIISREIHNCWRKKFSTLFFPNTITMLCR

Query:  RARVPKSKDDMKL
          R P   ++ KL
Subjt:  RARVPKSKDDMKL

A0A6A2ZUE4 Uncharacterized protein5.8e-1026.75Show/hide
Query:  FVKNLARVKYCKMLKRNFLLERGF------GEELPHFLRAGIINHGWVQFCTKPEPANSHMVREFYANIDEGKGFQVLVRGVVVDWSLGAINSLFNLQ--
        FV   A+  Y  +  R    E GF         L   +   +  H W +F   P P N+ +V+EFY+NI E     V+VRG+ + ++  AIN  F LQ  
Subjt:  FVKNLARVKYCKMLKRNFLLERGF------GEELPHFLRAGIINHGWVQFCTKPEPANSHMVREFYANIDEGKGFQVLVRGVVVDWSLGAINSLFNLQ--

Query:  -----------DFPLMQAIMK------WRW---------------------------HQQMSSSTRLSLS---------------IDVGKIISREIHNCW
                   D    Q I++       RW                           H+ M +S   ++S               ID+GKII    H C 
Subjt:  -----------DFPLMQAIMK------WRW---------------------------HQQMSSSTRLSLS---------------IDVGKIISREIHNCW

Query:  RKKFSTLFFPNTITMLCRRARVPKSKDD
        +++ S L FPN IT LCR+ +V +   D
Subjt:  RKKFSTLFFPNTITMLCRRARVPKSKDD

A0A6A3CE04 Uncharacterized protein5.8e-1027.31Show/hide
Query:  IINHGWVQFCTKPEPANSHMVREFYANIDEGKGFQVLVRGVVVDWSLGAINSLFNLQ-------------DFPLMQAIMK------WRWH-QQMSSSTRL
        +  H W  F   P   N+ +V+EFY+NI E   + V+V G+ + ++  AIN  F LQ             D    Q I++       +W+ QQMS  T  
Subjt:  IINHGWVQFCTKPEPANSHMVREFYANIDEGKGFQVLVRGVVVDWSLGAINSLFNLQ-------------DFPLMQAIMK------WRWH-QQMSSSTRL

Query:  SLSIDVGKIISREIHNCWRKKFSTLFFPNTITMLCRRARVPKSKDDMKL-----IHRVQEQLQLVFIRLEFIER--------------------------
           +D  +++  ++H C ++  S L FPN I  LCR+ +VP+   D  L     I +V+  L L +  L+  E+                          
Subjt:  SLSIDVGKIISREIHNCWRKKFSTLFFPNTITMLCRRARVPKSKDDMKL-----IHRVQEQLQLVFIRLEFIER--------------------------

Query:  ----------QLQTYWSYAKRRDATSRKALEENFSKPYQAFLVFPDDLM
                  +L TY++YAK RDA    AL E         L+FP+ L+
Subjt:  ----------QLQTYWSYAKRRDATSRKALEENFSKPYQAFLVFPDDLM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGTGGGCCTATTTTAGAAGCTGTGCTTTTGTCTGACTTCCCTTTGATAAATGCTGCAACAGCTGACTGCTTGCATGAGCTGGCAGAGGCAGATTGGTGGCTGGA
GTTGTTTTCAACGTGGAAAGCTTCATTTAATGAGGTGTCATTCCCAGCTGGTGTTAAAGGTTATTCTCATCTTTTTGTTAAACGTGTGGAGAATCTCGAGCTGACACGTG
TTACGCAGTGGCGATCCAACGAGCTAGCCATTAGCCAGCACATCAGCGCATTTACTAAGGGATTTTTACTTGCTTTGTGCGAGTTTTCTGTGAATCAATGGCTAAGACAA
GAGGAAAAAGAGGTTCGCCGGTTGAGAAGGCAGCAACAATCTCCTATTGTTGAGACGATTCAGAAGGTAATCGAAGACATTGCAGATGAAGAGGCTGAAGAAGAACCCAC
AAAATCCCCAGAAAAAGAAAAAACTCCAAACCCGATTGTACCTCAGACTGATATTCCGCAAGAAAGGCAAGAAGTAGTTGCAGAGGAGACAGTTCCAATCCAACCACCAC
GTCGACAGTGTAAACAGAAGCATGAAGCTGTCGATATTGCTGAGAAAAGAAATGAAGATAGAGGCAAAAATGTTGTTGATGTTGGGATTGGTGCCCTAAAACTCGTAGAT
AGCTTATCCTTAGATCTGCATAGACTCCCACAAGTCGTTCTTGGCCCGAAGAAGAGTAGGGAAGACACTAGAGGTGGTCCACACACCGTTCGTGATCAAAGGAATCAAAG
GGAGTTGTTGAATCGGTCTCCAAAAAGGTTGGTACAAATTCTGCTCTCTGTTTACGTTGAGGAGGCGGAAGAACCGAAAGAGAGACTTCCATATGAGCGTTTCGTCAAAA
ATCTTGCGAGAGTAAAATATTGCAAGATGCTAAAGCGCAATTTCTTGCTGGAGCGAGGTTTTGGCGAAGAGTTACCCCATTTTCTGAGGGCAGGTATCATCAATCATGGT
TGGGTGCAGTTCTGCACAAAGCCTGAGCCCGCTAACTCACATATGGTTCGCGAGTTCTATGCGAACATTGATGAAGGCAAAGGTTTCCAAGTGCTGGTTCGCGGCGTGGT
GGTGGATTGGAGTCTTGGTGCGATCAATTCCCTATTCAACCTACAAGATTTTCCTCTCATGCAAGCTATAATGAAATGGCGGTGGCACCAACAAATGAGTAGCTCAACGC
GGCTGTCTTTAAGCATTGATGTAGGAAAGATTATCTCTAGGGAAATTCACAATTGCTGGAGGAAAAAGTTCAGCACACTTTTCTTCCCAAATACAATTACTATGTTATGC
CGGAGGGCGAGGGTTCCGAAGAGCAAAGATGATATGAAGCTCATCCATCGCGTGCAAGAGCAGTTGCAATTGGTGTTCATTCGATTGGAGTTTATCGAGCGCCAACTCCA
AACGTACTGGAGTTATGCAAAGCGACGTGATGCCACATCAAGGAAGGCCCTGGAAGAGAATTTTTCCAAACCCTATCAGGCCTTCCTAGTATTCCCCGATGACTTAATGA
ACCTGTGGATCCCGCTGCCACCAGTGAAAAAAGATGATGAAGAAGAAGATGCTGGCCAAGAAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATAGTGGGCCTATTTTAGAAGCTGTGCTTTTGTCTGACTTCCCTTTGATAAATGCTGCAACAGCTGACTGCTTGCATGAGCTGGCAGAGGCAGATTGGTGGCTGGA
GTTGTTTTCAACGTGGAAAGCTTCATTTAATGAGGTGTCATTCCCAGCTGGTGTTAAAGGTTATTCTCATCTTTTTGTTAAACGTGTGGAGAATCTCGAGCTGACACGTG
TTACGCAGTGGCGATCCAACGAGCTAGCCATTAGCCAGCACATCAGCGCATTTACTAAGGGATTTTTACTTGCTTTGTGCGAGTTTTCTGTGAATCAATGGCTAAGACAA
GAGGAAAAAGAGGTTCGCCGGTTGAGAAGGCAGCAACAATCTCCTATTGTTGAGACGATTCAGAAGGTAATCGAAGACATTGCAGATGAAGAGGCTGAAGAAGAACCCAC
AAAATCCCCAGAAAAAGAAAAAACTCCAAACCCGATTGTACCTCAGACTGATATTCCGCAAGAAAGGCAAGAAGTAGTTGCAGAGGAGACAGTTCCAATCCAACCACCAC
GTCGACAGTGTAAACAGAAGCATGAAGCTGTCGATATTGCTGAGAAAAGAAATGAAGATAGAGGCAAAAATGTTGTTGATGTTGGGATTGGTGCCCTAAAACTCGTAGAT
AGCTTATCCTTAGATCTGCATAGACTCCCACAAGTCGTTCTTGGCCCGAAGAAGAGTAGGGAAGACACTAGAGGTGGTCCACACACCGTTCGTGATCAAAGGAATCAAAG
GGAGTTGTTGAATCGGTCTCCAAAAAGGTTGGTACAAATTCTGCTCTCTGTTTACGTTGAGGAGGCGGAAGAACCGAAAGAGAGACTTCCATATGAGCGTTTCGTCAAAA
ATCTTGCGAGAGTAAAATATTGCAAGATGCTAAAGCGCAATTTCTTGCTGGAGCGAGGTTTTGGCGAAGAGTTACCCCATTTTCTGAGGGCAGGTATCATCAATCATGGT
TGGGTGCAGTTCTGCACAAAGCCTGAGCCCGCTAACTCACATATGGTTCGCGAGTTCTATGCGAACATTGATGAAGGCAAAGGTTTCCAAGTGCTGGTTCGCGGCGTGGT
GGTGGATTGGAGTCTTGGTGCGATCAATTCCCTATTCAACCTACAAGATTTTCCTCTCATGCAAGCTATAATGAAATGGCGGTGGCACCAACAAATGAGTAGCTCAACGC
GGCTGTCTTTAAGCATTGATGTAGGAAAGATTATCTCTAGGGAAATTCACAATTGCTGGAGGAAAAAGTTCAGCACACTTTTCTTCCCAAATACAATTACTATGTTATGC
CGGAGGGCGAGGGTTCCGAAGAGCAAAGATGATATGAAGCTCATCCATCGCGTGCAAGAGCAGTTGCAATTGGTGTTCATTCGATTGGAGTTTATCGAGCGCCAACTCCA
AACGTACTGGAGTTATGCAAAGCGACGTGATGCCACATCAAGGAAGGCCCTGGAAGAGAATTTTTCCAAACCCTATCAGGCCTTCCTAGTATTCCCCGATGACTTAATGA
ACCTGTGGATCCCGCTGCCACCAGTGAAAAAAGATGATGAAGAAGAAGATGCTGGCCAAGAAGATTGA
Protein sequenceShow/hide protein sequence
MDSGPILEAVLLSDFPLINAATADCLHELAEADWWLELFSTWKASFNEVSFPAGVKGYSHLFVKRVENLELTRVTQWRSNELAISQHISAFTKGFLLALCEFSVNQWLRQ
EEKEVRRLRRQQQSPIVETIQKVIEDIADEEAEEEPTKSPEKEKTPNPIVPQTDIPQERQEVVAEETVPIQPPRRQCKQKHEAVDIAEKRNEDRGKNVVDVGIGALKLVD
SLSLDLHRLPQVVLGPKKSREDTRGGPHTVRDQRNQRELLNRSPKRLVQILLSVYVEEAEEPKERLPYERFVKNLARVKYCKMLKRNFLLERGFGEELPHFLRAGIINHG
WVQFCTKPEPANSHMVREFYANIDEGKGFQVLVRGVVVDWSLGAINSLFNLQDFPLMQAIMKWRWHQQMSSSTRLSLSIDVGKIISREIHNCWRKKFSTLFFPNTITMLC
RRARVPKSKDDMKLIHRVQEQLQLVFIRLEFIERQLQTYWSYAKRRDATSRKALEENFSKPYQAFLVFPDDLMNLWIPLPPVKKDDEEEDAGQED