; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg019863 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019863
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Genome locationscaffold5:28646311..28649752
RNA-Seq ExpressionSpg019863
SyntenySpg019863
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK08698.1 reverse transcriptase [Cucumis melo var. makuwa]4.8e-0451.85Show/hide
Query:  ICMGESGQFADSISLPFQGQDRMGAGNITVQDGIHSFPYWARARNSQQDGSRLL
        IC GESGQ ADSI L F GQDR+G      QDGIHSFP   R   +     R++
Subjt:  ICMGESGQFADSISLPFQGQDRMGAGNITVQDGIHSFPYWARARNSQQDGSRLL
TrEMBL top hitse value%identityAlignment
A0A5D3CBX3 Reverse transcriptase2.3e-0451.85Show/hide
Query:  ICMGESGQFADSISLPFQGQDRMGAGNITVQDGIHSFPYWARARNSQQDGSRLL
        IC GESGQ ADSI L F GQDR+G      QDGIHSFP   R   +     R++
Subjt:  ICMGESGQFADSISLPFQGQDRMGAGNITVQDGIHSFPYWARARNSQQDGSRLL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGAGCAACCTAAAAAATCTGACTGCAGGTCGACCTGAAATTGCGACTGCAAATATAGCCAATCTTGAGGAAGCAGTCCCAGTTGCTGAGGCACTAGTCAAAGATGA
TGCGCCCGCATTTGGGGCGCAAGTGCAGGTTCAGGCTTCAACAGATCTAGCTGCTGATCCATCTAAGCAAAGAGCCAAACGACCATCACAATGGGGTCTAGAGTTGGAGC
AACCGCTCGAGCAAAAAGACTGGAATAAGGTTGTGGCGGATACTATATGGCTAGCAAAGGCCAGGGCCGCCCAAATAAGAGATGAGCTATGGGCTGAAGCTGAGCCACGC
ACTCAAGTTGCGATCGCAAATGTGGAGCAACCTGAAAATCTGACTGTAGGTCGACCTGAAATTGAGACTACAAATATAGCCAATCTTGAGGAAGCAGTCCCAGTTCCTGA
GGCACTAGTCAAGGATGATGCGCCCGCATTTGGGGCGCAAGTGCAGGTTCAGGCTTCAACAGATCTAGCTACTGATCCATCTAAGCCAAGAGCCAAACGACCATCACAAT
GGGGTCTAGAGTTGGAGCAACCGCTCGAGCAAAAAGACTGGAATAAGGTTGTGGCGAATACTATATGGCTAGCAAAGGTCAGGGCCGCCCAAATAAGAGATAAGTTATGG
AGTGAAGAGAAAAGAAAGAGGAAGGAGGCCAAGAAAAGCAGAGGGAAGAAGAAGAAAAAGCTACACTGGATTTTGCAGCTTCGTGTCTCAAGGACTCAGTGGATGCCACT
GAGAAAGAAAAAGAAGAAGAGATTGCGCCTGCTTCTGAGGGCCAATCTAGAAGATATGCAGGGGAGTTTGCGGCCGCAAACACGACGCAAACAGGGCAAAAACCAGAAGT
TGTATCAGTTCCTGAGGGATAAGGCTGGGTACCTTATCCTGGTGACACTATGTGATACGGCCCACCTTGTATTCGATACAGATGCAATGATCCAAAGCATCCATATTTGT
ATGGGTGAGAGTGGCCAGTTCGCCGACTCAATAAGCCTACCATTTCAGGGGCAAGACCGAATGGGGGCTGGGAACATAACAGTACAAGATGGAATTCACTCCTTCCCCTA
TTGGGCACGTGCTAGAAATTCGCAACAGGACGGTTCAAGGCTGTTGGGCGGTCCGATTCACGCGGTCTGGCTGGGATGGGACCAATTTGTTCCGGTTCAGCTGGAATTTA
GCTCGGTTCGTGATTTTCGTAGCTGGTTCGAAGTGGTTCGGGTTGGTTCGGGCGGTCTAGACCAGTATTTGGAGCTGCAGAAGGACTTTAAGGATAGAAACCAATTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGGAGCAACCTAAAAAATCTGACTGCAGGTCGACCTGAAATTGCGACTGCAAATATAGCCAATCTTGAGGAAGCAGTCCCAGTTGCTGAGGCACTAGTCAAAGATGA
TGCGCCCGCATTTGGGGCGCAAGTGCAGGTTCAGGCTTCAACAGATCTAGCTGCTGATCCATCTAAGCAAAGAGCCAAACGACCATCACAATGGGGTCTAGAGTTGGAGC
AACCGCTCGAGCAAAAAGACTGGAATAAGGTTGTGGCGGATACTATATGGCTAGCAAAGGCCAGGGCCGCCCAAATAAGAGATGAGCTATGGGCTGAAGCTGAGCCACGC
ACTCAAGTTGCGATCGCAAATGTGGAGCAACCTGAAAATCTGACTGTAGGTCGACCTGAAATTGAGACTACAAATATAGCCAATCTTGAGGAAGCAGTCCCAGTTCCTGA
GGCACTAGTCAAGGATGATGCGCCCGCATTTGGGGCGCAAGTGCAGGTTCAGGCTTCAACAGATCTAGCTACTGATCCATCTAAGCCAAGAGCCAAACGACCATCACAAT
GGGGTCTAGAGTTGGAGCAACCGCTCGAGCAAAAAGACTGGAATAAGGTTGTGGCGAATACTATATGGCTAGCAAAGGTCAGGGCCGCCCAAATAAGAGATAAGTTATGG
AGTGAAGAGAAAAGAAAGAGGAAGGAGGCCAAGAAAAGCAGAGGGAAGAAGAAGAAAAAGCTACACTGGATTTTGCAGCTTCGTGTCTCAAGGACTCAGTGGATGCCACT
GAGAAAGAAAAAGAAGAAGAGATTGCGCCTGCTTCTGAGGGCCAATCTAGAAGATATGCAGGGGAGTTTGCGGCCGCAAACACGACGCAAACAGGGCAAAAACCAGAAGT
TGTATCAGTTCCTGAGGGATAAGGCTGGGTACCTTATCCTGGTGACACTATGTGATACGGCCCACCTTGTATTCGATACAGATGCAATGATCCAAAGCATCCATATTTGT
ATGGGTGAGAGTGGCCAGTTCGCCGACTCAATAAGCCTACCATTTCAGGGGCAAGACCGAATGGGGGCTGGGAACATAACAGTACAAGATGGAATTCACTCCTTCCCCTA
TTGGGCACGTGCTAGAAATTCGCAACAGGACGGTTCAAGGCTGTTGGGCGGTCCGATTCACGCGGTCTGGCTGGGATGGGACCAATTTGTTCCGGTTCAGCTGGAATTTA
GCTCGGTTCGTGATTTTCGTAGCTGGTTCGAAGTGGTTCGGGTTGGTTCGGGCGGTCTAGACCAGTATTTGGAGCTGCAGAAGGACTTTAAGGATAGAAACCAATTCTAG
Protein sequenceShow/hide protein sequence
MWSNLKNLTAGRPEIATANIANLEEAVPVAEALVKDDAPAFGAQVQVQASTDLAADPSKQRAKRPSQWGLELEQPLEQKDWNKVVADTIWLAKARAAQIRDELWAEAEPR
TQVAIANVEQPENLTVGRPEIETTNIANLEEAVPVPEALVKDDAPAFGAQVQVQASTDLATDPSKPRAKRPSQWGLELEQPLEQKDWNKVVANTIWLAKVRAAQIRDKLW
SEEKRKRKEAKKSRGKKKKKLHWILQLRVSRTQWMPLRKKKKKRLRLLLRANLEDMQGSLRPQTRRKQGKNQKLYQFLRDKAGYLILVTLCDTAHLVFDTDAMIQSIHIC
MGESGQFADSISLPFQGQDRMGAGNITVQDGIHSFPYWARARNSQQDGSRLLGGPIHAVWLGWDQFVPVQLEFSSVRDFRSWFEVVRVGSGGLDQYLELQKDFKDRNQF