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Spg019880 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019880
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionSWR1-complex protein 4
Genome locationscaffold5:28921534..28923598
RNA-Seq ExpressionSpg019880
SyntenySpg019880
Gene Ontology termsGO:0000122 - negative regulation of transcription by RNA polymerase II (biological process)
GO:0006281 - DNA repair (biological process)
GO:0043486 - histone exchange (biological process)
GO:0043967 - histone H4 acetylation (biological process)
GO:0043968 - histone H2A acetylation (biological process)
GO:0000812 - Swr1 complex (cellular component)
GO:0016020 - membrane (cellular component)
GO:0035267 - NuA4 histone acetyltransferase complex (cellular component)
GO:0003714 - transcription corepressor activity (molecular function)
InterPro domainsIPR027109 - SWR1-complex protein 4/DNA methyltransferase 1-associated protein 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046714.1 SWR1-complex protein 4 [Cucumis melo var. makuwa]2.9e-2371.88Show/hide
Query:  TDEEYEKYLNDLMGISVNLKPRVPTKAVLVCAEHLELRKEILTLLNLQKQLQNKEAEGSSFRDSPYNEPPGTPKVSKCTRLHEYRKGLANGIRNVR
        T +  E+ L DL   SVNLKPRVPTKA  VCAEHLELRKEILTLLNLQKQLQNKEAEGSSFRDSPY E PGTPK    T + +  KGL NGI+N R
Subjt:  TDEEYEKYLNDLMGISVNLKPRVPTKAVLVCAEHLELRKEILTLLNLQKQLQNKEAEGSSFRDSPYNEPPGTPKVSKCTRLHEYRKGLANGIRNVR
XP_008451441.1 PREDICTED: SWR1-complex protein 4 [Cucumis melo]8.7e-2081.08Show/hide
Query:  TDEEYEKYLNDLMGISVNLKPRVPTKAVLVCAEHLELRKEILTLLNLQKQLQNKEAEGSSFRDSPYNEPPGTPK
        T +  E+ L DL   SVNLKPRVPTKA  VCAEHLELRKEILTLLNLQKQLQNKEAEGSSFRDSPY E PGTPK
Subjt:  TDEEYEKYLNDLMGISVNLKPRVPTKAVLVCAEHLELRKEILTLLNLQKQLQNKEAEGSSFRDSPYNEPPGTPK
XP_011659406.1 SWR1-complex protein 4 [Cucumis sativus]8.7e-2081.08Show/hide
Query:  TDEEYEKYLNDLMGISVNLKPRVPTKAVLVCAEHLELRKEILTLLNLQKQLQNKEAEGSSFRDSPYNEPPGTPK
        T +  E+ L DL   SVNLKPRVPTKA  VCAEHLELRKEILTLLNLQKQLQNKEAEGSSFRDSPY E PGTPK
Subjt:  TDEEYEKYLNDLMGISVNLKPRVPTKAVLVCAEHLELRKEILTLLNLQKQLQNKEAEGSSFRDSPYNEPPGTPK
XP_022153204.1 SWR1-complex protein 4 [Momordica charantia]3.9e-2081.08Show/hide
Query:  TDEEYEKYLNDLMGISVNLKPRVPTKAVLVCAEHLELRKEILTLLNLQKQLQNKEAEGSSFRDSPYNEPPGTPK
        T +  E+ L DL   SVNLKPRVPTKA  VCAEHLELRKEILTLLNLQKQLQNKEAEGSSFRDSPYN+ PGTPK
Subjt:  TDEEYEKYLNDLMGISVNLKPRVPTKAVLVCAEHLELRKEILTLLNLQKQLQNKEAEGSSFRDSPYNEPPGTPK
XP_022954224.1 SWR1-complex protein 4-like isoform X2 [Cucurbita moschata]1.9e-1979.73Show/hide
Query:  TDEEYEKYLNDLMGISVNLKPRVPTKAVLVCAEHLELRKEILTLLNLQKQLQNKEAEGSSFRDSPYNEPPGTPK
        T +  E+ L DL   SVNLKPRVPTKA  VCAEHLELRKEILTLLNLQKQLQNKEAEGSSFR+SPY+E PGTPK
Subjt:  TDEEYEKYLNDLMGISVNLKPRVPTKAVLVCAEHLELRKEILTLLNLQKQLQNKEAEGSSFRDSPYNEPPGTPK
TrEMBL top hitse value%identityAlignment
A0A0A0K9K0 SANT domain-containing protein4.2e-2081.08Show/hide
Query:  TDEEYEKYLNDLMGISVNLKPRVPTKAVLVCAEHLELRKEILTLLNLQKQLQNKEAEGSSFRDSPYNEPPGTPK
        T +  E+ L DL   SVNLKPRVPTKA  VCAEHLELRKEILTLLNLQKQLQNKEAEGSSFRDSPY E PGTPK
Subjt:  TDEEYEKYLNDLMGISVNLKPRVPTKAVLVCAEHLELRKEILTLLNLQKQLQNKEAEGSSFRDSPYNEPPGTPK
A0A1S3BSL6 SWR1-complex protein 44.2e-2081.08Show/hide
Query:  TDEEYEKYLNDLMGISVNLKPRVPTKAVLVCAEHLELRKEILTLLNLQKQLQNKEAEGSSFRDSPYNEPPGTPK
        T +  E+ L DL   SVNLKPRVPTKA  VCAEHLELRKEILTLLNLQKQLQNKEAEGSSFRDSPY E PGTPK
Subjt:  TDEEYEKYLNDLMGISVNLKPRVPTKAVLVCAEHLELRKEILTLLNLQKQLQNKEAEGSSFRDSPYNEPPGTPK
A0A5A7TUG7 SWR1-complex protein 41.4e-2371.88Show/hide
Query:  TDEEYEKYLNDLMGISVNLKPRVPTKAVLVCAEHLELRKEILTLLNLQKQLQNKEAEGSSFRDSPYNEPPGTPKVSKCTRLHEYRKGLANGIRNVR
        T +  E+ L DL   SVNLKPRVPTKA  VCAEHLELRKEILTLLNLQKQLQNKEAEGSSFRDSPY E PGTPK    T + +  KGL NGI+N R
Subjt:  TDEEYEKYLNDLMGISVNLKPRVPTKAVLVCAEHLELRKEILTLLNLQKQLQNKEAEGSSFRDSPYNEPPGTPKVSKCTRLHEYRKGLANGIRNVR
A0A6J1DID3 SWR1-complex protein 41.9e-2081.08Show/hide
Query:  TDEEYEKYLNDLMGISVNLKPRVPTKAVLVCAEHLELRKEILTLLNLQKQLQNKEAEGSSFRDSPYNEPPGTPK
        T +  E+ L DL   SVNLKPRVPTKA  VCAEHLELRKEILTLLNLQKQLQNKEAEGSSFRDSPYN+ PGTPK
Subjt:  TDEEYEKYLNDLMGISVNLKPRVPTKAVLVCAEHLELRKEILTLLNLQKQLQNKEAEGSSFRDSPYNEPPGTPK
A0A6J1JX24 SWR1-complex protein 4-like isoform X39.3e-2079.73Show/hide
Query:  TDEEYEKYLNDLMGISVNLKPRVPTKAVLVCAEHLELRKEILTLLNLQKQLQNKEAEGSSFRDSPYNEPPGTPK
        T +  E+ L DL   SVNLKPRVPTKA  VCAEHLELRKEILTLLNLQKQLQNKEAEGSSFR+SPY+E PGTPK
Subjt:  TDEEYEKYLNDLMGISVNLKPRVPTKAVLVCAEHLELRKEILTLLNLQKQLQNKEAEGSSFRDSPYNEPPGTPK
SwissProt top hitse value%identityAlignment
Q8VZL6 SWR1-complex protein 46.7e-1564.86Show/hide
Query:  TDEEYEKYLNDLMGISVNLKPRVPTKAVLVCAEHLELRKEILTLLNLQKQLQNKEAEGSSFRDSPYNEPPGTPK
        T +  E+ L DL    VNLKP+VPTK   VC EHLELRKEILTLLNLQKQLQ KE+EGSS R+  Y   P TPK
Subjt:  TDEEYEKYLNDLMGISVNLKPRVPTKAVLVCAEHLELRKEILTLLNLQKQLQNKEAEGSSFRDSPYNEPPGTPK
Arabidopsis top hitse value%identityAlignment
AT2G47210.1 myb-like transcription factor family protein4.7e-1664.86Show/hide
Query:  TDEEYEKYLNDLMGISVNLKPRVPTKAVLVCAEHLELRKEILTLLNLQKQLQNKEAEGSSFRDSPYNEPPGTPK
        T +  E+ L DL    VNLKP+VPTK   VC EHLELRKEILTLLNLQKQLQ KE+EGSS R+  Y   P TPK
Subjt:  TDEEYEKYLNDLMGISVNLKPRVPTKAVLVCAEHLELRKEILTLLNLQKQLQNKEAEGSSFRDSPYNEPPGTPK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCTGTTGAAATTGTCAAATACACGGATGAGGAGTATGAGAAGTATTTGAATGACCTTATGGGTATATCCGTTAATCTAAAGCCGAGGGTTCCAACAAAAGCAGTCTTAGT
CTGTGCAGAGCATCTTGAATTAAGAAAAGAAATATTGACTCTTCTGAATCTTCAGAAGCAGTTGCAAAATAAGGAGGCAGAAGGCTCATCTTTCCGTGACAGTCCATACA
ACGAGCCACCTGGCACACCCAAGGTCAGTAAATGTACTCGCTTACACGAGTACCGGAAAGGTTTGGCAAACGGGATCAGAAACGTAAGGTATGTTTTGTCAACTATTATC
TTATTTAGGTTTTGTCAACTTAATACATATTTTGATTTTACA
mRNA sequenceShow/hide mRNA sequence
TCTGTTGAAATTGTCAAATACACGGATGAGGAGTATGAGAAGTATTTGAATGACCTTATGGGTATATCCGTTAATCTAAAGCCGAGGGTTCCAACAAAAGCAGTCTTAGT
CTGTGCAGAGCATCTTGAATTAAGAAAAGAAATATTGACTCTTCTGAATCTTCAGAAGCAGTTGCAAAATAAGGAGGCAGAAGGCTCATCTTTCCGTGACAGTCCATACA
ACGAGCCACCTGGCACACCCAAGGTCAGTAAATGTACTCGCTTACACGAGTACCGGAAAGGTTTGGCAAACGGGATCAGAAACGTAAGGTATGTTTTGTCAACTATTATC
TTATTTAGGTTTTGTCAACTTAATACATATTTTGATTTTACA
Protein sequenceShow/hide protein sequence
SVEIVKYTDEEYEKYLNDLMGISVNLKPRVPTKAVLVCAEHLELRKEILTLLNLQKQLQNKEAEGSSFRDSPYNEPPGTPKVSKCTRLHEYRKGLANGIRNVRYVLSTII
LFRFCQLNTYFDFT