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Spg019915 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019915
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold5:31099259..31102569
RNA-Seq ExpressionSpg019915
SyntenySpg019915
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEC73134.1 hypothetical protein OsI_07152 [Oryza sativa Indica Group]6.5e-1527.76Show/hide
Query:  MNIPLNPRQKEDVVIWHYDRKGIFSIKSVYRLGME--RRETTS-----------HLFWGCKVTKGLWLKYFHPTDLVYFIGREDLAPMDYLHGIWKISNS
        + I ++ RQ+ED V W  DR G FS++S Y+L M+  R +  S           +L W C V          P  +  F  R     +  +    K +  
Subjt:  MNIPLNPRQKEDVVIWHYDRKGIFSIKSVYRLGME--RRETTS-----------HLFWGCKVTKGLWLKYFHPTDLVYFIGREDLAPMDYLHGIWKISNS

Query:  GVREKDKMCKSLILF-----WVRPPSGMWKLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRLESLAVCEGLK-ALSIESPPVQIETDA
         V    +      LF     W RP  G  KLN D ++  +  RGGIG  L +S G ++ +    I R    L  E +A  +GL  AL     P+ +E+D 
Subjt:  GVREKDKMCKSLILF-----WVRPPSGMWKLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRLESLAVCEGLK-ALSIESPPVQIETDA

Query:  LQVVHLLNGREEDETEVKLFIDETKSLIFERKVEGVYLVNKNLNQLAHNLARKASLSGCSNNW
        L+++ LLN +E+  +     + E + L+   K      V++N N+++H LA K         W
Subjt:  LQVVHLLNGREEDETEVKLFIDETKSLIFERKVEGVYLVNKNLNQLAHNLARKASLSGCSNNW

XP_019156914.1 PREDICTED: uncharacterized protein LOC109153501 [Ipomoea nil]6.9e-1727.27Show/hide
Query:  MNIPLNPRQKEDVVIWHYDRKGIFSIKSVYR-----------------LGMERRETTSHLFWGC--------------KVTKGLWLKYFHPTDLVYFIGR
        +NIP++ R+  D  +W +D+KG +S+KS Y+                 L +  +E+  HLF  C              K     W  +    D V+    
Subjt:  MNIPLNPRQKEDVVIWHYDRKGIFSIKSVYR-----------------LGMERRETTSHLFWGC--------------KVTKGLWLKYFHPTDLVYFIGR

Query:  EDLAPMDYLHGI----WKISNSGVREKDKMCKSLILFWVRPPSGMWKLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRLESLAVCEGL
         D+  M +   +    W+ +N G R   +        W +P  G  KLN+D A  +E N  G+GW L   +G  L+A    +   + +   ESL++ E L
Subjt:  EDLAPMDYLHGI----WKISNSGVREKDKMCKSLILFWVRPPSGMWKLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRLESLAVCEGL

Query:  KALSIES-PPVQIETDALQVVHLLNGREEDETEVKLFIDETKSLIFERKVEGVYLVNKNLNQLAHNLARKA-SLSGCSNNWTHSFPDWLLNLNVGDL
          L       V +ETD   V + L   E   +     I++ K L  E      Y V ++ N  AH +AR+A S+SGC   W  S P +L++  + DL
Subjt:  KALSIES-PPVQIETDALQVVHLLNGREEDETEVKLFIDETKSLIFERKVEGVYLVNKNLNQLAHNLARKA-SLSGCSNNWTHSFPDWLLNLNVGDL

XP_022143535.1 uncharacterized protein LOC111013412 [Momordica charantia]1.6e-1836.57Show/hide
Query:  WVRPPSGMWKLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRLESLAVCEGLKALSIE-SPPVQIETDALQVVHLLNGREEDETEVKLF
        W  P S  WKLN++AAW  + N GGIGW L    G ++ A  R I     I  LE +A+CEGL+A+  E   P+ +E+D+L+ +HLL+ + +D+TE+   
Subjt:  WVRPPSGMWKLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRLESLAVCEGLKALSIE-SPPVQIETDALQVVHLLNGREEDETEVKLF

Query:  IDETKSLIFERKVEGVYLVNKNLNQLAHNLARKA
        ++E   ++ + ++  +  +++  N++AH LAR+A
Subjt:  IDETKSLIFERKVEGVYLVNKNLNQLAHNLARKA

XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]6.3e-1837.01Show/hide
Query:  LFWVRPPSGMWKLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRLESLAVCEGLKALSIES--PPVQIETDALQVVHLLNGREEDETEV
        L W  PP  +W LN+DA+WS+  +RGGIGW +   DG ++ AG R +     +  LE+ A+ EGL+ L+      P+ IETD+ +V  LLN + ED T+ 
Subjt:  LFWVRPPSGMWKLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRLESLAVCEGLKALSIES--PPVQIETDALQVVHLLNGREEDETEV

Query:  KLFIDETKSLIFERKVEGVYLVNKNLNQLAHNLARKASLSGCSNNWTHSFPDWL
           ++E  +L    ++     V +  N  AH+LA++AS+   S  W   FP+WL
Subjt:  KLFIDETKSLIFERKVEGVYLVNKNLNQLAHNLARKASLSGCSNNWTHSFPDWL

XP_022156777.1 uncharacterized protein LOC111023608 [Momordica charantia]1.3e-1835.92Show/hide
Query:  WVRPPSGMWKLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRLESLAVCEGLKALSIE---------SPPVQIETDALQVVHLLNGREE
        W  P S  WKLN+DAAW  + N GGIGW L    G ++ A  R I     I  LE +A+CEGL+A+  E           P+ +E+D+L+ +HLL+ + +
Subjt:  WVRPPSGMWKLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRLESLAVCEGLKALSIE---------SPPVQIETDALQVVHLLNGREE

Query:  DETEVKLFIDETKSLIFERKVEGVYLVNKNLNQLAHNLARKA
        D+TE+   ++E   ++ + K+  +  +++  N++AH+LAR+A
Subjt:  DETEVKLFIDETKSLIFERKVEGVYLVNKNLNQLAHNLARKA

TrEMBL top hitse value%identityAlignment
A0A6J1CP26 uncharacterized protein LOC1110134128.0e-1936.57Show/hide
Query:  WVRPPSGMWKLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRLESLAVCEGLKALSIE-SPPVQIETDALQVVHLLNGREEDETEVKLF
        W  P S  WKLN++AAW  + N GGIGW L    G ++ A  R I     I  LE +A+CEGL+A+  E   P+ +E+D+L+ +HLL+ + +D+TE+   
Subjt:  WVRPPSGMWKLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRLESLAVCEGLKALSIE-SPPVQIETDALQVVHLLNGREEDETEVKLF

Query:  IDETKSLIFERKVEGVYLVNKNLNQLAHNLARKA
        ++E   ++ + ++  +  +++  N++AH LAR+A
Subjt:  IDETKSLIFERKVEGVYLVNKNLNQLAHNLARKA

A0A6J1DNV9 uncharacterized protein LOC1110224033.0e-1837.01Show/hide
Query:  LFWVRPPSGMWKLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRLESLAVCEGLKALSIES--PPVQIETDALQVVHLLNGREEDETEV
        L W  PP  +W LN+DA+WS+  +RGGIGW +   DG ++ AG R +     +  LE+ A+ EGL+ L+      P+ IETD+ +V  LLN + ED T+ 
Subjt:  LFWVRPPSGMWKLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRLESLAVCEGLKALSIES--PPVQIETDALQVVHLLNGREEDETEV

Query:  KLFIDETKSLIFERKVEGVYLVNKNLNQLAHNLARKASLSGCSNNWTHSFPDWL
           ++E  +L    ++     V +  N  AH+LA++AS+   S  W   FP+WL
Subjt:  KLFIDETKSLIFERKVEGVYLVNKNLNQLAHNLARKASLSGCSNNWTHSFPDWL

A0A6J1DSV1 uncharacterized protein LOC1110236086.1e-1935.92Show/hide
Query:  WVRPPSGMWKLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRLESLAVCEGLKALSIE---------SPPVQIETDALQVVHLLNGREE
        W  P S  WKLN+DAAW  + N GGIGW L    G ++ A  R I     I  LE +A+CEGL+A+  E           P+ +E+D+L+ +HLL+ + +
Subjt:  WVRPPSGMWKLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRLESLAVCEGLKALSIE---------SPPVQIETDALQVVHLLNGREE

Query:  DETEVKLFIDETKSLIFERKVEGVYLVNKNLNQLAHNLARKA
        D+TE+   ++E   ++ + K+  +  +++  N++AH+LAR+A
Subjt:  DETEVKLFIDETKSLIFERKVEGVYLVNKNLNQLAHNLARKA

B8AHI8 Uncharacterized protein3.1e-1527.76Show/hide
Query:  MNIPLNPRQKEDVVIWHYDRKGIFSIKSVYRLGME--RRETTS-----------HLFWGCKVTKGLWLKYFHPTDLVYFIGREDLAPMDYLHGIWKISNS
        + I ++ RQ+ED V W  DR G FS++S Y+L M+  R +  S           +L W C V          P  +  F  R     +  +    K +  
Subjt:  MNIPLNPRQKEDVVIWHYDRKGIFSIKSVYRLGME--RRETTS-----------HLFWGCKVTKGLWLKYFHPTDLVYFIGREDLAPMDYLHGIWKISNS

Query:  GVREKDKMCKSLILF-----WVRPPSGMWKLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRLESLAVCEGLK-ALSIESPPVQIETDA
         V    +      LF     W RP  G  KLN D ++  +  RGGIG  L +S G ++ +    I R    L  E +A  +GL  AL     P+ +E+D 
Subjt:  GVREKDKMCKSLILF-----WVRPPSGMWKLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRLESLAVCEGLK-ALSIESPPVQIETDA

Query:  LQVVHLLNGREEDETEVKLFIDETKSLIFERKVEGVYLVNKNLNQLAHNLARKASLSGCSNNW
        L+++ LLN +E+  +     + E + L+   K      V++N N+++H LA K         W
Subjt:  LQVVHLLNGREEDETEVKLFIDETKSLIFERKVEGVYLVNKNLNQLAHNLARKASLSGCSNNW

M5WQH4 Uncharacterized protein (Fragment)5.7e-1725.98Show/hide
Query:  IPLNPRQKEDVVIWHYDRKGIFSIKSVYRLG---MERRETTS-----------------------HLFW-----GCKVTK-GLWLKYFHPTDLVYFIGRE
        IPL+   K+D +IWH+D+KG F++KS Y++    ++ R   S                        LFW     G   TK  LW +  H        G E
Subjt:  IPLNPRQKEDVVIWHYDRKGIFSIKSVYRLG---MERRETTS-----------------------HLFW-----GCKVTK-GLWLKYFHPTDLVYFIGRE

Query:  DLAPMDYLHGIWKISNSGVREKDKMCKSLILFWVRPPSGMWKLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRLESLAVCEG-LKALS
               LH +W    +   +      S    W +P +G  K+N D +W+     GG+G  +  S+G  ++     +   +  L++E+ A  EG + A+ 
Subjt:  DLAPMDYLHGIWKISNSGVREKDKMCKSLILFWVRPPSGMWKLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRLESLAVCEG-LKALS

Query:  IESPPVQIETDALQVVHLLNGREEDETEVKLFIDETKSLIFERKVEGVYLVNKNLNQLAHNLARKASLSGCSNNWTHSFPD
         +   V  E+D+LQ++  +     D + V   +++TK+L+ +   +G   + +  N  AH LAR AS  G +  W    PD
Subjt:  IESPPVQIETDALQVVHLLNGREEDETEVKLFIDETKSLIFERKVEGVYLVNKNLNQLAHNLARKASLSGCSNNWTHSFPD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52990.1 thioredoxin family protein7.2e-0426.92Show/hide
Query:  PSGMWKLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRLESLAVCEGLKALS-IESPPVQIETDALQVVHLLNGREEDETEVKLFIDET
        PS   K N DA+  E     G+GW +  S G++L  G      R      E  A+   ++A S      V  E D   V  L+N  + D   +K ++D  
Subjt:  PSGMWKLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRLESLAVCEGLKALS-IESPPVQIETDALQVVHLLNGREEDETEVKLFIDET

Query:  KSLIFERKVEGVYLVNKNLNQLAHNLARKASLSGCSNNWTHSFPDWLLNLNVGDLG
        KS I           ++  NQ A  L +KA  S    +  +  P +L  + +  LG
Subjt:  KSLIFERKVEGVYLVNKNLNQLAHNLARKASLSGCSNNWTHSFPDWLLNLNVGDLG

AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein8.2e-0827.85Show/hide
Query:  KSLILFWVRPPSGMWKLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRLESLAVCEGLKALS-IESPPVQIETDALQVVHLLNGREEDE
        ++L + W  PP    K N+DA W  E  R GIGW L    G +L  G RA+ R   +L  E  A+   +  +S      +  E+DA  +V+LLN  +   
Subjt:  KSLILFWVRPPSGMWKLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRLESLAVCEGLKALS-IESPPVQIETDALQVVHLLNGREEDE

Query:  TEVKLFIDETKSLIFERKVEGVYLVNKNLNQLAHNLARKA-SLSGCSNNWTHSFPDWL
        T ++  +++ + L+   +        +  N++A  +AR++ S S          P WL
Subjt:  TEVKLFIDETKSLIFERKVEGVYLVNKNLNQLAHNLARKA-SLSGCSNNWTHSFPDWL

AT4G29090.1 Ribonuclease H-like superfamily protein1.5e-0628.57Show/hide
Query:  RPPSGMW-KLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRLESLAVCEGLKALS-IESPPVQIETDALQVVHLLNGREEDETEVKLFI
        RPP   W K N+DA W+ +  R GIGW L    G +   G RA+ +   +L  E  A+   + +LS  +   V  E+D+  ++ +LN  +E    +K  I
Subjt:  RPPSGMW-KLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRLESLAVCEGLKALS-IESPPVQIETDALQVVHLLNGREEDETEVKLFI

Query:  DETKSLIFERKVEGVYLVNKNLNQLAHNLARKA
         + + L+ +        + +  N LA  +AR++
Subjt:  DETKSLIFERKVEGVYLVNKNLNQLAHNLARKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATATCCCTCTTAATCCGCGTCAAAAAGAGGATGTCGTTATCTGGCACTATGATCGTAAAGGGATCTTCTCAATTAAAAGCGTATACCGATTGGGGATGGAAAGGAG
GGAGACGACATCTCACCTGTTTTGGGGTTGCAAAGTTACAAAAGGTCTGTGGCTGAAATATTTTCACCCTACTGATTTAGTCTATTTCATTGGTAGGGAAGATCTGGCGC
CTATGGATTATCTACATGGTATTTGGAAGATCTCAAACTCGGGAGTGAGGGAGAAGGACAAGATGTGCAAGAGCCTAATTCTATTTTGGGTCAGACCTCCAAGTGGGATG
TGGAAGCTCAATAGTGACGCGGCCTGGTCTGAAGAGTTTAATCGCGGTGGGATTGGGTGGGCTCTTCTGCAATCGGATGGGTCTCTTCTGTCTGCCGGATTTCGAGCGAT
ATCAAGGCGATGGAAGATTTTGCGTCTAGAGTCATTGGCGGTTTGCGAAGGTCTCAAAGCCTTGTCGATCGAGTCACCTCCTGTCCAAATCGAAACAGATGCTCTTCAGG
TGGTCCATCTTCTAAACGGACGTGAGGAAGACGAGACAGAAGTGAAGCTCTTCATAGATGAAACTAAATCCCTAATTTTCGAGAGGAAGGTTGAAGGTGTGTACCTTGTG
AACAAAAATCTTAACCAACTGGCTCATAATTTGGCCAGAAAAGCGAGTTTAAGTGGGTGTTCAAATAACTGGACCCACTCCTTTCCTGATTGGCTACTTAATCTAAATGT
AGGAGATTTAGGTGGTTTTGATACCAATAGTGGGGGTTCTGTCCCACCACCAATGGTTTCCATCCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATATCCCTCTTAATCCGCGTCAAAAAGAGGATGTCGTTATCTGGCACTATGATCGTAAAGGGATCTTCTCAATTAAAAGCGTATACCGATTGGGGATGGAAAGGAG
GGAGACGACATCTCACCTGTTTTGGGGTTGCAAAGTTACAAAAGGTCTGTGGCTGAAATATTTTCACCCTACTGATTTAGTCTATTTCATTGGTAGGGAAGATCTGGCGC
CTATGGATTATCTACATGGTATTTGGAAGATCTCAAACTCGGGAGTGAGGGAGAAGGACAAGATGTGCAAGAGCCTAATTCTATTTTGGGTCAGACCTCCAAGTGGGATG
TGGAAGCTCAATAGTGACGCGGCCTGGTCTGAAGAGTTTAATCGCGGTGGGATTGGGTGGGCTCTTCTGCAATCGGATGGGTCTCTTCTGTCTGCCGGATTTCGAGCGAT
ATCAAGGCGATGGAAGATTTTGCGTCTAGAGTCATTGGCGGTTTGCGAAGGTCTCAAAGCCTTGTCGATCGAGTCACCTCCTGTCCAAATCGAAACAGATGCTCTTCAGG
TGGTCCATCTTCTAAACGGACGTGAGGAAGACGAGACAGAAGTGAAGCTCTTCATAGATGAAACTAAATCCCTAATTTTCGAGAGGAAGGTTGAAGGTGTGTACCTTGTG
AACAAAAATCTTAACCAACTGGCTCATAATTTGGCCAGAAAAGCGAGTTTAAGTGGGTGTTCAAATAACTGGACCCACTCCTTTCCTGATTGGCTACTTAATCTAAATGT
AGGAGATTTAGGTGGTTTTGATACCAATAGTGGGGGTTCTGTCCCACCACCAATGGTTTCCATCCTTTAA
Protein sequenceShow/hide protein sequence
MNIPLNPRQKEDVVIWHYDRKGIFSIKSVYRLGMERRETTSHLFWGCKVTKGLWLKYFHPTDLVYFIGREDLAPMDYLHGIWKISNSGVREKDKMCKSLILFWVRPPSGM
WKLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRLESLAVCEGLKALSIESPPVQIETDALQVVHLLNGREEDETEVKLFIDETKSLIFERKVEGVYLV
NKNLNQLAHNLARKASLSGCSNNWTHSFPDWLLNLNVGDLGGFDTNSGGSVPPPMVSIL