; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg019969 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019969
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionER membrane protein complex subunit 3
Genome locationscaffold5:34297969..34300278
RNA-Seq ExpressionSpg019969
SyntenySpg019969
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139548.1 ER membrane protein complex subunit 3 [Cucumis sativus]6.3e-0997.06Show/hide
Query:  GLSAEKDNLDIVQHEWVLPKFEHRAEAVLRKFVS
        GLSAEKDNLDIVQHEWVLPKFEHRAEAVLRK VS
Subjt:  GLSAEKDNLDIVQHEWVLPKFEHRAEAVLRKFVS
XP_008458952.1 PREDICTED: ER membrane protein complex subunit 3 [Cucumis melo]6.3e-0997.06Show/hide
Query:  GLSAEKDNLDIVQHEWVLPKFEHRAEAVLRKFVS
        GLSAEKDNLDIVQHEWVLPKFEHRAEAVLRK VS
Subjt:  GLSAEKDNLDIVQHEWVLPKFEHRAEAVLRKFVS
XP_022142524.1 ER membrane protein complex subunit 3 [Momordica charantia]1.3e-09100Show/hide
Query:  GLSAEKDNLDIVQHEWVLPKFEHRAEAVLRKFVS
        GLSAEKDNLDIVQHEWVLPKFEHRAEAVLRKFVS
Subjt:  GLSAEKDNLDIVQHEWVLPKFEHRAEAVLRKFVS
XP_023001598.1 ER membrane protein complex subunit 3 [Cucurbita maxima]6.3e-0997.06Show/hide
Query:  GLSAEKDNLDIVQHEWVLPKFEHRAEAVLRKFVS
        GLSAEKDNLDIVQHEWVLPKFEHRAEAVLRK VS
Subjt:  GLSAEKDNLDIVQHEWVLPKFEHRAEAVLRKFVS
XP_038894845.1 ER membrane protein complex subunit 3 [Benincasa hispida]6.3e-0997.06Show/hide
Query:  GLSAEKDNLDIVQHEWVLPKFEHRAEAVLRKFVS
        GLSAEKDNLDIVQHEWVLPKFEHRAEAVLRK VS
Subjt:  GLSAEKDNLDIVQHEWVLPKFEHRAEAVLRKFVS
TrEMBL top hitse value%identityAlignment
A0A1S3C924 ER membrane protein complex subunit 33.0e-0997.06Show/hide
Query:  GLSAEKDNLDIVQHEWVLPKFEHRAEAVLRKFVS
        GLSAEKDNLDIVQHEWVLPKFEHRAEAVLRK VS
Subjt:  GLSAEKDNLDIVQHEWVLPKFEHRAEAVLRKFVS
A0A6J1CLR8 ER membrane protein complex subunit 36.1e-10100Show/hide
Query:  GLSAEKDNLDIVQHEWVLPKFEHRAEAVLRKFVS
        GLSAEKDNLDIVQHEWVLPKFEHRAEAVLRKFVS
Subjt:  GLSAEKDNLDIVQHEWVLPKFEHRAEAVLRKFVS
A0A6J1EPC4 ER membrane protein complex subunit 34.0e-0994.12Show/hide
Query:  GLSAEKDNLDIVQHEWVLPKFEHRAEAVLRKFVS
        GLSAEKDNLDIVQHEWVLPKFEHRAEAVLRK +S
Subjt:  GLSAEKDNLDIVQHEWVLPKFEHRAEAVLRKFVS
A0A6J1KQZ7 ER membrane protein complex subunit 33.0e-0997.06Show/hide
Query:  GLSAEKDNLDIVQHEWVLPKFEHRAEAVLRKFVS
        GLSAEKDNLDIVQHEWVLPKFEHRAEAVLRK VS
Subjt:  GLSAEKDNLDIVQHEWVLPKFEHRAEAVLRKFVS
A0A6P3ZIZ3 ER membrane protein complex subunit 31.3e-0790.91Show/hide
Query:  GLSAEKDNLDIVQHEWVLPKFEHRAEAVLRKFV
        GLSAEKD+LDIVQHEW LPKFEHRAEAVLRK V
Subjt:  GLSAEKDNLDIVQHEWVLPKFEHRAEAVLRKFV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G12590.1 Protein of unknown function DUF106, transmembrane3.3e-0875Show/hide
Query:  LSAEKDNLDIVQHEWVLPKFEHRAEAVLRKFV
        L AEKD LDI+QHEW LP+FE RAE+VLRK V
Subjt:  LSAEKDNLDIVQHEWVLPKFEHRAEAVLRKFV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTCAACACTTCTTGTCATCTTGGGTCATGTTAACACTTTTGATAGGCTTTCGAGAGTGAAGGCTCCTGTGGTCGGTCTTCGAGTTTCATTTTGCGAGCCATCGCC
GTTGAAGGGATACGATCGAGGAGTTCCTCCTCCATCTGCCGTTTCGGAAGAAAGGAAAGTTCCTTTGGCATGTTGGCAGGACAAGCTTTTAATTATCCTGATTTTCCTAT
TGCTCATTGACCTGGAACTGATATCAGGGAAAAGCACCGGAGTTGAAAACTTGGCAGAATGCCTGTTTCTTGATTTGTTTGATGATGAATTTGCAAACTTCTTGTTGATT
GGTCAATTGACCGGTTTGAGTGCCGAGAAAGACAACTTAGACATAGTACAGCATGAATGGGTCCTACCTAAGTTTGAGCATCGTGCTGAAGCGGTGTTGAGAAAGTTTGT
CAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTTCAACACTTCTTGTCATCTTGGGTCATGTTAACACTTTTGATAGGCTTTCGAGAGTGAAGGCTCCTGTGGTCGGTCTTCGAGTTTCATTTTGCGAGCCATCGCC
GTTGAAGGGATACGATCGAGGAGTTCCTCCTCCATCTGCCGTTTCGGAAGAAAGGAAAGTTCCTTTGGCATGTTGGCAGGACAAGCTTTTAATTATCCTGATTTTCCTAT
TGCTCATTGACCTGGAACTGATATCAGGGAAAAGCACCGGAGTTGAAAACTTGGCAGAATGCCTGTTTCTTGATTTGTTTGATGATGAATTTGCAAACTTCTTGTTGATT
GGTCAATTGACCGGTTTGAGTGCCGAGAAAGACAACTTAGACATAGTACAGCATGAATGGGTCCTACCTAAGTTTGAGCATCGTGCTGAAGCGGTGTTGAGAAAGTTTGT
CAGCTGA
Protein sequenceShow/hide protein sequence
MLSTLLVILGHVNTFDRLSRVKAPVVGLRVSFCEPSPLKGYDRGVPPPSAVSEERKVPLACWQDKLLIILIFLLLIDLELISGKSTGVENLAECLFLDLFDDEFANFLLI
GQLTGLSAEKDNLDIVQHEWVLPKFEHRAEAVLRKFVS