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Spg019991 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019991
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotransposon protein
Genome locationscaffold5:34765502..34766411
RNA-Seq ExpressionSpg019991
SyntenySpg019991
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025858.1 retrotransposon protein [Cucumis melo var. makuwa]8.7e-3250Show/hide
Query:  AWTCIESRVRTRKKQYQAIAEMMGLGCSGFGWNDEFKCIEAEKETFDLWVKTHLIAKGLLNKPFPHFEDLAYVFGKDRATGGVSEVMAKMGSIVPDDAVN
        A T I+ R++T K+ +QAIAEM GL CSGFGWNDE KCI AEKE FD WV++H  AKGLLNKPFP++++L YVFG+DRATG  +E  A +GS  P    +
Subjt:  AWTCIESRVRTRKKQYQAIAEMMGLGCSGFGWNDEFKCIEAEKETFDLWVKTHLIAKGLLNKPFPHFEDLAYVFGKDRATGGVSEVMAKMGSIVPDDAVN

Query:  LSGSPDNDIPIPPFTMPTVNMSEDEPRVTPDSQTYPIGNSSRGSKRKR
             D +   PP     +++S+D+ R +  S+       S GSKRKR
Subjt:  LSGSPDNDIPIPPFTMPTVNMSEDEPRVTPDSQTYPIGNSSRGSKRKR

KAA0035078.1 retrotransposon protein [Cucumis melo var. makuwa]5.1e-3247.17Show/hide
Query:  AWTCIESRVRTRKKQYQAIAEMMGLGCSGFGWNDEFKCIEAEKETFDLWVKTHLIAKGLLNKPFPHFEDLAYVFGKDRATGGVSEVMAKMGSIVPDDAVN
        A T I+ R++T K+ +QAIAEM G  CSGFGWNDE KCI AEKE FD WV++H +AKGLLNKPFP++++L YVFG+DRATG  +E  A MGS  P    +
Subjt:  AWTCIESRVRTRKKQYQAIAEMMGLGCSGFGWNDEFKCIEAEKETFDLWVKTHLIAKGLLNKPFPHFEDLAYVFGKDRATGGVSEVMAKMGSIVPDDAVN

Query:  LSGSPDNDIPIPPFTMPTVNMSEDEPRVTPDSQTYPIGNSSRGSKRKRSGSNMHIAEVV
             D     PP     +++S+D+ R +  S+       S GSKRKR        E +
Subjt:  LSGSPDNDIPIPPFTMPTVNMSEDEPRVTPDSQTYPIGNSSRGSKRKRSGSNMHIAEVV

TYK05082.1 retrotransposon protein [Cucumis melo var. makuwa]8.7e-3250.63Show/hide
Query:  IESRVRTRKKQYQAIAEMMGLGCSGFGWNDEFKCIEAEKETFDLWVKTHLIAKGLLNKPFPHFEDLAYVFGKDRATGGVSEVMAKMGSIVPD--DAVNLS
        I+SR++  K+ + A+AEM G  CSGFGWNDE KCI  EKE FD WVK+H  AKGLLNK F H+++L+YVFGKDRATGG +E  A +GS  P   DA    
Subjt:  IESRVRTRKKQYQAIAEMMGLGCSGFGWNDEFKCIEAEKETFDLWVKTHLIAKGLLNKPFPHFEDLAYVFGKDRATGGVSEVMAKMGSIVPD--DAVNLS

Query:  GSPDNDIPIPPFTMPTVNMSEDEPRVTPDSQTYPIGNSSRGSKRKRSGSNMHIAEVVR
          PD D   PP   P +NMS D+   T  ++     N S GSKRKR G      ++VR
Subjt:  GSPDNDIPIPPFTMPTVNMSEDEPRVTPDSQTYPIGNSSRGSKRKRSGSNMHIAEVVR

XP_031742657.1 uncharacterized protein LOC116404426 [Cucumis sativus]2.4e-3448.81Show/hide
Query:  AWTCIESRVRTRKKQYQAIAEMMGLGCSGFGWNDEFKCIEAEKETFDLWVKTHLIAKGLLNKPFPHFEDLAYVFGKDRATGGVSEVMAKMGSIVPDDAVN
        A T I+ R++T K+ YQAIAEM G  CSGFGWND+ KCI AEKE FD WV++H  AKGLLNKPFP+++  AYVFGKDRA G   E  A +GS VP     
Subjt:  AWTCIESRVRTRKKQYQAIAEMMGLGCSGFGWNDEFKCIEAEKETFDLWVKTHLIAKGLLNKPFPHFEDLAYVFGKDRATGGVSEVMAKMGSIVPDDAVN

Query:  LSGSPDNDIPIPPFTMPTVNMSEDEPRVTPDSQTYPIGNSSRGSKRKRSGSNMHIAEVVREGMASYTD
              ND+ IP  +    NMS+D+  +T  S+      +S GSK +R G     A+V+++ MA  TD
Subjt:  LSGSPDNDIPIPPFTMPTVNMSEDEPRVTPDSQTYPIGNSSRGSKRKRSGSNMHIAEVVREGMASYTD

XP_031744343.1 uncharacterized protein LOC116404989 [Cucumis sativus]1.6e-3347.95Show/hide
Query:  AWTCIESRVRTRKKQYQAIAEMMGLGCSGFGWNDEFKCIEAEKETFDLWVKTHLIAKGLLNKPFPHFEDLAYVFGKDRATGGVSEVMAKMGSIVPDDAVN
        A T I+ R++T K+ YQ IAEM G  C GFGWND+ KCI AEKE FD WV++H  AKGLLNK FP++++LAYVFGKDRA G  +E  A +GS VP     
Subjt:  AWTCIESRVRTRKKQYQAIAEMMGLGCSGFGWNDEFKCIEAEKETFDLWVKTHLIAKGLLNKPFPHFEDLAYVFGKDRATGGVSEVMAKMGSIVPDDAVN

Query:  LSGSPDNDIPIPPFTMPTVNMSEDE---PRVTPDSQTYPIGNSSRGSKRKRSGSNMHIAEVVREGMASYTD
              ND+  P  +    NMS+D+   P    DS+T     +S GSKR+R G  +  A+V+++ MA  TD
Subjt:  LSGSPDNDIPIPPFTMPTVNMSEDE---PRVTPDSQTYPIGNSSRGSKRKRSGSNMHIAEVVREGMASYTD

TrEMBL top hitse value%identityAlignment
A0A5A7SI64 Retrotransposon protein4.2e-3250Show/hide
Query:  AWTCIESRVRTRKKQYQAIAEMMGLGCSGFGWNDEFKCIEAEKETFDLWVKTHLIAKGLLNKPFPHFEDLAYVFGKDRATGGVSEVMAKMGSIVPDDAVN
        A T I+ R++T K+ +QAIAEM GL CSGFGWNDE KCI AEKE FD WV++H  AKGLLNKPFP++++L YVFG+DRATG  +E  A +GS  P    +
Subjt:  AWTCIESRVRTRKKQYQAIAEMMGLGCSGFGWNDEFKCIEAEKETFDLWVKTHLIAKGLLNKPFPHFEDLAYVFGKDRATGGVSEVMAKMGSIVPDDAVN

Query:  LSGSPDNDIPIPPFTMPTVNMSEDEPRVTPDSQTYPIGNSSRGSKRKR
             D +   PP     +++S+D+ R +  S+       S GSKRKR
Subjt:  LSGSPDNDIPIPPFTMPTVNMSEDEPRVTPDSQTYPIGNSSRGSKRKR

A0A5A7SWU2 Retrotransposon protein2.5e-3247.17Show/hide
Query:  AWTCIESRVRTRKKQYQAIAEMMGLGCSGFGWNDEFKCIEAEKETFDLWVKTHLIAKGLLNKPFPHFEDLAYVFGKDRATGGVSEVMAKMGSIVPDDAVN
        A T I+ R++T K+ +QAIAEM G  CSGFGWNDE KCI AEKE FD WV++H +AKGLLNKPFP++++L YVFG+DRATG  +E  A MGS  P    +
Subjt:  AWTCIESRVRTRKKQYQAIAEMMGLGCSGFGWNDEFKCIEAEKETFDLWVKTHLIAKGLLNKPFPHFEDLAYVFGKDRATGGVSEVMAKMGSIVPDDAVN

Query:  LSGSPDNDIPIPPFTMPTVNMSEDEPRVTPDSQTYPIGNSSRGSKRKRSGSNMHIAEVV
             D     PP     +++S+D+ R +  S+       S GSKRKR        E +
Subjt:  LSGSPDNDIPIPPFTMPTVNMSEDEPRVTPDSQTYPIGNSSRGSKRKRSGSNMHIAEVV

A0A5A7U308 Retrotransposon protein9.4e-3250.68Show/hide
Query:  AWTCIESRVRTRKKQYQAIAEMMGLGCSGFGWNDEFKCIEAEKETFDLWVKTHLIAKGLLNKPFPHFEDLAYVFGKDRATGGVSEVMAKMGSIVPDDAVN
        A T I+ R++T K+ +QAIAEM GL CSGFGWNDE KCI AEKE FD WV++H  AKGLLNKPFP++++L YVFG+DRATG  +E  A +GS  P D  +
Subjt:  AWTCIESRVRTRKKQYQAIAEMMGLGCSGFGWNDEFKCIEAEKETFDLWVKTHLIAKGLLNKPFPHFEDLAYVFGKDRATGGVSEVMAKMGSIVPDDAVN

Query:  LSGSPDNDIPIPPFTMPTVNMSEDEPRVTPDSQTYPIGNSSRGSKRKR
             D +   P      V++S+D+ R +  S+       S GSKRKR
Subjt:  LSGSPDNDIPIPPFTMPTVNMSEDEPRVTPDSQTYPIGNSSRGSKRKR

A0A5D3C1M0 Retrotransposon protein4.2e-3250.63Show/hide
Query:  IESRVRTRKKQYQAIAEMMGLGCSGFGWNDEFKCIEAEKETFDLWVKTHLIAKGLLNKPFPHFEDLAYVFGKDRATGGVSEVMAKMGSIVPD--DAVNLS
        I+SR++  K+ + A+AEM G  CSGFGWNDE KCI  EKE FD WVK+H  AKGLLNK F H+++L+YVFGKDRATGG +E  A +GS  P   DA    
Subjt:  IESRVRTRKKQYQAIAEMMGLGCSGFGWNDEFKCIEAEKETFDLWVKTHLIAKGLLNKPFPHFEDLAYVFGKDRATGGVSEVMAKMGSIVPD--DAVNLS

Query:  GSPDNDIPIPPFTMPTVNMSEDEPRVTPDSQTYPIGNSSRGSKRKRSGSNMHIAEVVR
          PD D   PP   P +NMS D+   T  ++     N S GSKRKR G      ++VR
Subjt:  GSPDNDIPIPPFTMPTVNMSEDEPRVTPDSQTYPIGNSSRGSKRKRSGSNMHIAEVVR

A0A5D3CWL2 Retrotransposon protein1.6e-3150Show/hide
Query:  AWTCIESRVRTRKKQYQAIAEMMGLGCSGFGWNDEFKCIEAEKETFDLWVKTHLIAKGLLNKPFPHFEDLAYVFGKDRATGGVSEVMAKMGSIVPDDAVN
        A T I+ R++T K+ +QAIAEM G  CSGFGWNDE KCI AEKE FD WV++H  AKGLLNKPFP++++L YVFG+DRATG  +E  A +GS  P    +
Subjt:  AWTCIESRVRTRKKQYQAIAEMMGLGCSGFGWNDEFKCIEAEKETFDLWVKTHLIAKGLLNKPFPHFEDLAYVFGKDRATGGVSEVMAKMGSIVPDDAVN

Query:  LSGSPDNDIPIPPFTMPTVNMSEDEPRVTPDSQTYPIGNSSRGSKRKR
             D +   PP     V++S+D+ R +  S+       S GSKRKR
Subjt:  LSGSPDNDIPIPPFTMPTVNMSEDEPRVTPDSQTYPIGNSSRGSKRKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30140.1 unknown protein1.3e-0634.15Show/hide
Query:  SRVRTRKKQYQAIAEMMGLGCSGFGWNDEFKCIEAEKETFDLWVKTHLIAKGLLNKPFPHFEDLAYVFGKDRATGGVSEVMA
        SR++  K  YQ+  ++     SGFGW+ E K   A  E +  ++K H   K +  +   HFEDL  +FG   ATG  +  M+
Subjt:  SRVRTRKKQYQAIAEMMGLGCSGFGWNDEFKCIEAEKETFDLWVKTHLIAKGLLNKPFPHFEDLAYVFGKDRATGGVSEVMA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATCTTGGCAACTGGAACACTTGATGAGGGAGAAACTGCCTGGACCTGCATTGAATCCAGGGTTCGCACCCGAAAGAAACAATATCAAGCAATCGCAGAGATGATGGGTCT
TGGATGCAGTGGCTTTGGCTGGAACGATGAATTTAAGTGCATCGAGGCAGAGAAAGAAACATTTGACCTGTGGGTGAAGACTCATCTTATCGCAAAGGGCTTGCTAAACA
AGCCTTTCCCGCATTTCGAGGACTTGGCATATGTTTTTGGGAAGGATCGAGCCACAGGAGGGGTGTCGGAGGTGATGGCAAAGATGGGTTCCATCGTGCCAGATGATGCA
GTAAACCTCAGTGGATCCCCAGACAACGACATCCCCATCCCGCCGTTCACCATGCCTACTGTGAACATGTCAGAGGATGAGCCTCGGGTGACGCCAGACAGTCAAACTTA
CCCAATCGGAAATTCGTCACGTGGGAGTAAGAGGAAGAGATCTGGGTCTAACATGCACATTGCAGAAGTTGTCAGAGAGGGAATGGCCTCGTATACTGATAACTCTCCAA
AAGGGAGTTATTTAGACCTTATTTCTAATATAGTGATGAGCGACTTGAGGGAGCAAAATTTGTGCTGCAGCAAAGTAGGGAGCAAAACTTCCACGTCACAGCTCGTTAGC
CAATTTAATGAACTGAAATTAGTTAAGCTATTCTCGGATTTGAGGAGCAAGGAGAGCCATCCACATGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATCTTGGCAACTGGAACACTTGATGAGGGAGAAACTGCCTGGACCTGCATTGAATCCAGGGTTCGCACCCGAAAGAAACAATATCAAGCAATCGCAGAGATGATGGGTCT
TGGATGCAGTGGCTTTGGCTGGAACGATGAATTTAAGTGCATCGAGGCAGAGAAAGAAACATTTGACCTGTGGGTGAAGACTCATCTTATCGCAAAGGGCTTGCTAAACA
AGCCTTTCCCGCATTTCGAGGACTTGGCATATGTTTTTGGGAAGGATCGAGCCACAGGAGGGGTGTCGGAGGTGATGGCAAAGATGGGTTCCATCGTGCCAGATGATGCA
GTAAACCTCAGTGGATCCCCAGACAACGACATCCCCATCCCGCCGTTCACCATGCCTACTGTGAACATGTCAGAGGATGAGCCTCGGGTGACGCCAGACAGTCAAACTTA
CCCAATCGGAAATTCGTCACGTGGGAGTAAGAGGAAGAGATCTGGGTCTAACATGCACATTGCAGAAGTTGTCAGAGAGGGAATGGCCTCGTATACTGATAACTCTCCAA
AAGGGAGTTATTTAGACCTTATTTCTAATATAGTGATGAGCGACTTGAGGGAGCAAAATTTGTGCTGCAGCAAAGTAGGGAGCAAAACTTCCACGTCACAGCTCGTTAGC
CAATTTAATGAACTGAAATTAGTTAAGCTATTCTCGGATTTGAGGAGCAAGGAGAGCCATCCACATGTCTAG
Protein sequenceShow/hide protein sequence
ILATGTLDEGETAWTCIESRVRTRKKQYQAIAEMMGLGCSGFGWNDEFKCIEAEKETFDLWVKTHLIAKGLLNKPFPHFEDLAYVFGKDRATGGVSEVMAKMGSIVPDDA
VNLSGSPDNDIPIPPFTMPTVNMSEDEPRVTPDSQTYPIGNSSRGSKRKRSGSNMHIAEVVREGMASYTDNSPKGSYLDLISNIVMSDLREQNLCCSKVGSKTSTSQLVS
QFNELKLVKLFSDLRSKESHPHV