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Spg019996 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019996
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGirdin-like
Genome locationscaffold5:31018437..31022501
RNA-Seq ExpressionSpg019996
SyntenySpg019996
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036941.1 girdin-like [Cucumis melo var. makuwa]2.7e-1565.08Show/hide
Query:  KEEDIIYWRVDQTIEILRFVARRANGFAEWAAELRVNISPMQPNADDLNRFLRMICKELGHLG
        ++  ++  RVDQTIE LR V++RA+GFAEWA +LRVN   MQP+ADDLNRFL+MIC+ELGH G
Subjt:  KEEDIIYWRVDQTIEILRFVARRANGFAEWAAELRVNISPMQPNADDLNRFLRMICKELGHLG

KAA0056623.1 girdin-like [Cucumis melo var. makuwa]3.8e-4967.39Show/hide
Query:  MSNVSMHSSLEPKYDEPGVVLQWAEKIKQKFGDSLTDSSHISLPTSCQISFTQNDLTKLKAIWEGLSPERRFVFSKKYGHIADLMYIPANHFTLRAVVHF
        MSN+SMHSS E K+DEP  VL+WAE+++QKFGD + +SS IS+ + CQ+S TQNDL  LK IWE L+P+RRF+FSKKYGHIA+LMYI  N+F LRA+++F
Subjt:  MSNVSMHSSLEPKYDEPGVVLQWAEKIKQKFGDSLTDSSHISLPTSCQISFTQNDLTKLKAIWEGLSPERRFVFSKKYGHIADLMYIPANHFTLRAVVHF

Query:  WYPAYHCFTFGSFDLLPTIKEYQAMLSIPEKEEDIIYW
        W PAY CFTFGS DLLPTI+EYQAMLS+PEKE +I+Y+
Subjt:  WYPAYHCFTFGSFDLLPTIKEYQAMLSIPEKEEDIIYW

KAA0060423.1 uncharacterized protein E6C27_scaffold22G002420 [Cucumis melo var. makuwa]1.2e-5068.12Show/hide
Query:  MSNVSMHSSLEPKYDEPGVVLQWAEKIKQKFGDSLTDSSHISLPTSCQISFTQNDLTKLKAIWEGLSPERRFVFSKKYGHIADLMYIPANHFTLRAVVHF
        MSN+SMHSS E K+DEP  VL+WAE+++QKFGD + +SS IS+ + CQ+SFTQNDL  LK IWE L+P+RRF+FSKKYGHI +LMYIP N+F LRA+++F
Subjt:  MSNVSMHSSLEPKYDEPGVVLQWAEKIKQKFGDSLTDSSHISLPTSCQISFTQNDLTKLKAIWEGLSPERRFVFSKKYGHIADLMYIPANHFTLRAVVHF

Query:  WYPAYHCFTFGSFDLLPTIKEYQAMLSIPEKEEDIIYW
        W PAY CFTFGS DLLPTI+EYQAMLS+PEKE +I+Y+
Subjt:  WYPAYHCFTFGSFDLLPTIKEYQAMLSIPEKEEDIIYW

KAA0066094.1 girdin-like [Cucumis melo var. makuwa]2.6e-5068.12Show/hide
Query:  MSNVSMHSSLEPKYDEPGVVLQWAEKIKQKFGDSLTDSSHISLPTSCQISFTQNDLTKLKAIWEGLSPERRFVFSKKYGHIADLMYIPANHFTLRAVVHF
        MSN+SMHSS E K+DEP  VL+WAE+++QKFGD + +SS IS+ + CQ+SFTQNDL  LK IWE L+P+RRF+FSKKYGHIA+LMYIP N+F LRA+++F
Subjt:  MSNVSMHSSLEPKYDEPGVVLQWAEKIKQKFGDSLTDSSHISLPTSCQISFTQNDLTKLKAIWEGLSPERRFVFSKKYGHIADLMYIPANHFTLRAVVHF

Query:  WYPAYHCFTFGSFDLLPTIKEYQAMLSIPEKEEDIIYW
        W PAY CFTFGS DLLPTI+EYQAMLS+P KE +I+Y+
Subjt:  WYPAYHCFTFGSFDLLPTIKEYQAMLSIPEKEEDIIYW

TYK07552.1 girdin-like [Cucumis melo var. makuwa]1.6e-4765.22Show/hide
Query:  MSNVSMHSSLEPKYDEPGVVLQWAEKIKQKFGDSLTDSSHISLPTSCQISFTQNDLTKLKAIWEGLSPERRFVFSKKYGHIADLMYIPANHFTLRAVVHF
        MSN+SMHSS E K+DE   VL+WAE+++QKFGD + +SS IS+ + CQ+S T+NDL  LK IWE L+P+RRF+FSKKYGHIA+LMY P N+F LRA+++F
Subjt:  MSNVSMHSSLEPKYDEPGVVLQWAEKIKQKFGDSLTDSSHISLPTSCQISFTQNDLTKLKAIWEGLSPERRFVFSKKYGHIADLMYIPANHFTLRAVVHF

Query:  WYPAYHCFTFGSFDLLPTIKEYQAMLSIPEKEEDIIYW
        W PAY CFTFGS DLLPTI+EYQ MLS+PEKE +I+Y+
Subjt:  WYPAYHCFTFGSFDLLPTIKEYQAMLSIPEKEEDIIYW

TYK07552.1 girdin-like [Cucumis melo var. makuwa]2.5e-0833.12Show/hide
Query:  LRMICKELGHLGIKIARNIPIHHPYNTKSKSRIMEEQGKDMEKMKQEINNLSEQVAKILELLSTGKGKWVVEAAQASNPIQEID-DPAYPPGFTPQHRCD
        L+ IC  +   G +         P N+ S    ++ QG          + +S     + ELL       +++  Q + PI  I   P+YP  +    RCD
Subjt:  LRMICKELGHLGIKIARNIPIHHPYNTKSKSRIMEEQGKDMEKMKQEINNLSEQVAKILELLSTGKGKWVVEAAQASNPIQEID-DPAYPPGFTPQHRCD

Query:  ARTTLNR----ELLRFEKKVQTLINAGWLNFKKASENLDINNNSLPNHENPKVNVVD
              R      L  ++KVQ+LINAGWL+FKK+ E  ++N N LP+HENPKVN VD
Subjt:  ARTTLNR----ELLRFEKKVQTLINAGWLNFKKASENLDINNNSLPNHENPKVNVVD

TYK07552.1 girdin-like [Cucumis melo var. makuwa]2.9e-3355.07Show/hide
Query:  MSNVSMHSSLEPKYDEPGVVLQWAEKIKQKFGDSLTDSSHISLPTSCQISFTQNDLTKLKAIWEGLSPERRFVFSKKYGHIADLMYIPANHFTLRAVVHF
        MSN+SMHSS E K+DEP  VL+WAE+++QKFGD+LT                               P+RRF+FSKKYGHIA+LMYIP N+F LRA+++F
Subjt:  MSNVSMHSSLEPKYDEPGVVLQWAEKIKQKFGDSLTDSSHISLPTSCQISFTQNDLTKLKAIWEGLSPERRFVFSKKYGHIADLMYIPANHFTLRAVVHF

Query:  WYPAYHCFTFGSFDLLPTIKEYQAMLSIPEKEEDIIYW
          PAY CFTFGS +LLPTI+EYQAMLS+PEKE +I+Y+
Subjt:  WYPAYHCFTFGSFDLLPTIKEYQAMLSIPEKEEDIIYW

TrEMBL top hitse value%identityAlignment
A0A5A7T5S7 Girdin-like1.3e-1565.08Show/hide
Query:  KEEDIIYWRVDQTIEILRFVARRANGFAEWAAELRVNISPMQPNADDLNRFLRMICKELGHLG
        ++  ++  RVDQTIE LR V++RA+GFAEWA +LRVN   MQP+ADDLNRFL+MIC+ELGH G
Subjt:  KEEDIIYWRVDQTIEILRFVARRANGFAEWAAELRVNISPMQPNADDLNRFLRMICKELGHLG

A0A5A7UL51 Girdin-like1.8e-4967.39Show/hide
Query:  MSNVSMHSSLEPKYDEPGVVLQWAEKIKQKFGDSLTDSSHISLPTSCQISFTQNDLTKLKAIWEGLSPERRFVFSKKYGHIADLMYIPANHFTLRAVVHF
        MSN+SMHSS E K+DEP  VL+WAE+++QKFGD + +SS IS+ + CQ+S TQNDL  LK IWE L+P+RRF+FSKKYGHIA+LMYI  N+F LRA+++F
Subjt:  MSNVSMHSSLEPKYDEPGVVLQWAEKIKQKFGDSLTDSSHISLPTSCQISFTQNDLTKLKAIWEGLSPERRFVFSKKYGHIADLMYIPANHFTLRAVVHF

Query:  WYPAYHCFTFGSFDLLPTIKEYQAMLSIPEKEEDIIYW
        W PAY CFTFGS DLLPTI+EYQAMLS+PEKE +I+Y+
Subjt:  WYPAYHCFTFGSFDLLPTIKEYQAMLSIPEKEEDIIYW

A0A5A7UWQ6 Uncharacterized protein5.7e-5168.12Show/hide
Query:  MSNVSMHSSLEPKYDEPGVVLQWAEKIKQKFGDSLTDSSHISLPTSCQISFTQNDLTKLKAIWEGLSPERRFVFSKKYGHIADLMYIPANHFTLRAVVHF
        MSN+SMHSS E K+DEP  VL+WAE+++QKFGD + +SS IS+ + CQ+SFTQNDL  LK IWE L+P+RRF+FSKKYGHI +LMYIP N+F LRA+++F
Subjt:  MSNVSMHSSLEPKYDEPGVVLQWAEKIKQKFGDSLTDSSHISLPTSCQISFTQNDLTKLKAIWEGLSPERRFVFSKKYGHIADLMYIPANHFTLRAVVHF

Query:  WYPAYHCFTFGSFDLLPTIKEYQAMLSIPEKEEDIIYW
        W PAY CFTFGS DLLPTI+EYQAMLS+PEKE +I+Y+
Subjt:  WYPAYHCFTFGSFDLLPTIKEYQAMLSIPEKEEDIIYW

A0A5A7VFL0 Girdin-like1.3e-5068.12Show/hide
Query:  MSNVSMHSSLEPKYDEPGVVLQWAEKIKQKFGDSLTDSSHISLPTSCQISFTQNDLTKLKAIWEGLSPERRFVFSKKYGHIADLMYIPANHFTLRAVVHF
        MSN+SMHSS E K+DEP  VL+WAE+++QKFGD + +SS IS+ + CQ+SFTQNDL  LK IWE L+P+RRF+FSKKYGHIA+LMYIP N+F LRA+++F
Subjt:  MSNVSMHSSLEPKYDEPGVVLQWAEKIKQKFGDSLTDSSHISLPTSCQISFTQNDLTKLKAIWEGLSPERRFVFSKKYGHIADLMYIPANHFTLRAVVHF

Query:  WYPAYHCFTFGSFDLLPTIKEYQAMLSIPEKEEDIIYW
        W PAY CFTFGS DLLPTI+EYQAMLS+P KE +I+Y+
Subjt:  WYPAYHCFTFGSFDLLPTIKEYQAMLSIPEKEEDIIYW

A0A5D3C8D9 Girdin-like7.6e-4865.22Show/hide
Query:  MSNVSMHSSLEPKYDEPGVVLQWAEKIKQKFGDSLTDSSHISLPTSCQISFTQNDLTKLKAIWEGLSPERRFVFSKKYGHIADLMYIPANHFTLRAVVHF
        MSN+SMHSS E K+DE   VL+WAE+++QKFGD + +SS IS+ + CQ+S T+NDL  LK IWE L+P+RRF+FSKKYGHIA+LMY P N+F LRA+++F
Subjt:  MSNVSMHSSLEPKYDEPGVVLQWAEKIKQKFGDSLTDSSHISLPTSCQISFTQNDLTKLKAIWEGLSPERRFVFSKKYGHIADLMYIPANHFTLRAVVHF

Query:  WYPAYHCFTFGSFDLLPTIKEYQAMLSIPEKEEDIIYW
        W PAY CFTFGS DLLPTI+EYQ MLS+PEKE +I+Y+
Subjt:  WYPAYHCFTFGSFDLLPTIKEYQAMLSIPEKEEDIIYW

A0A5D3C8D9 Girdin-like1.2e-0833.12Show/hide
Query:  LRMICKELGHLGIKIARNIPIHHPYNTKSKSRIMEEQGKDMEKMKQEINNLSEQVAKILELLSTGKGKWVVEAAQASNPIQEID-DPAYPPGFTPQHRCD
        L+ IC  +   G +         P N+ S    ++ QG          + +S     + ELL       +++  Q + PI  I   P+YP  +    RCD
Subjt:  LRMICKELGHLGIKIARNIPIHHPYNTKSKSRIMEEQGKDMEKMKQEINNLSEQVAKILELLSTGKGKWVVEAAQASNPIQEID-DPAYPPGFTPQHRCD

Query:  ARTTLNR----ELLRFEKKVQTLINAGWLNFKKASENLDINNNSLPNHENPKVNVVD
              R      L  ++KVQ+LINAGWL+FKK+ E  ++N N LP+HENPKVN VD
Subjt:  ARTTLNR----ELLRFEKKVQTLINAGWLNFKKASENLDINNNSLPNHENPKVNVVD

A0A5D3C8D9 Girdin-like1.4e-3355.07Show/hide
Query:  MSNVSMHSSLEPKYDEPGVVLQWAEKIKQKFGDSLTDSSHISLPTSCQISFTQNDLTKLKAIWEGLSPERRFVFSKKYGHIADLMYIPANHFTLRAVVHF
        MSN+SMHSS E K+DEP  VL+WAE+++QKFGD+LT                               P+RRF+FSKKYGHIA+LMYIP N+F LRA+++F
Subjt:  MSNVSMHSSLEPKYDEPGVVLQWAEKIKQKFGDSLTDSSHISLPTSCQISFTQNDLTKLKAIWEGLSPERRFVFSKKYGHIADLMYIPANHFTLRAVVHF

Query:  WYPAYHCFTFGSFDLLPTIKEYQAMLSIPEKEEDIIYW
          PAY CFTFGS +LLPTI+EYQAMLS+PEKE +I+Y+
Subjt:  WYPAYHCFTFGSFDLLPTIKEYQAMLSIPEKEEDIIYW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAATGTGTCCATGCATTCATCCTTGGAACCTAAGTATGATGAACCAGGTGTTGTTCTCCAATGGGCCGAGAAAATAAAGCAAAAATTTGGTGATAGCTTAACTGA
TTCTTCTCATATATCCTTACCAACCAGTTGCCAAATCTCTTTCACACAAAATGATTTGACCAAATTGAAGGCTATATGGGAGGGTTTGTCACCAGAGCGTAGATTTGTGT
TCTCGAAGAAGTATGGTCATATAGCGGATTTGATGTATATTCCAGCGAACCATTTTACTTTAAGAGCTGTAGTTCACTTTTGGTATCCAGCTTACCATTGTTTCACGTTC
GGGTCATTTGACTTATTACCAACAATCAAGGAATATCAAGCTATGCTCAGCATCCCTGAGAAGGAGGAAGACATAATTTATTGGCGTGTGGATCAAACCATTGAAATTCT
TAGATTCGTTGCTAGAAGGGCTAATGGCTTCGCAGAATGGGCAGCTGAACTAAGAGTCAATATTTCTCCGATGCAACCTAACGCAGATGACTTGAATAGGTTTCTAAGGA
TGATATGCAAAGAACTTGGGCATCTTGGAATAAAAATAGCTCGCAACATTCCAATTCACCATCCCTACAATACAAAATCTAAAAGTCGAATCATGGAAGAGCAAGGCAAG
GATATGGAGAAAATGAAACAAGAGATCAATAATCTTAGTGAACAAGTAGCAAAAATTCTAGAATTACTTTCAACTGGGAAAGGAAAATGGGTTGTAGAAGCAGCACAGGC
AAGCAATCCAATCCAGGAAATCGATGATCCTGCTTATCCACCTGGATTTACTCCTCAACATCGGTGTGACGCCCGGACAACACTCAACAGAGAATTGCTTCGCTTTGAAA
AAAAGGTGCAAACCTTAATCAATGCTGGATGGTTAAACTTTAAGAAAGCTAGTGAAAATTTGGATATCAACAATAACTCATTACCTAATCATGAGAACCCAAAAGTGAAT
GTTGTAGATTATCGACCCTACAGTAAGATATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCAATGTGTCCATGCATTCATCCTTGGAACCTAAGTATGATGAACCAGGTGTTGTTCTCCAATGGGCCGAGAAAATAAAGCAAAAATTTGGTGATAGCTTAACTGA
TTCTTCTCATATATCCTTACCAACCAGTTGCCAAATCTCTTTCACACAAAATGATTTGACCAAATTGAAGGCTATATGGGAGGGTTTGTCACCAGAGCGTAGATTTGTGT
TCTCGAAGAAGTATGGTCATATAGCGGATTTGATGTATATTCCAGCGAACCATTTTACTTTAAGAGCTGTAGTTCACTTTTGGTATCCAGCTTACCATTGTTTCACGTTC
GGGTCATTTGACTTATTACCAACAATCAAGGAATATCAAGCTATGCTCAGCATCCCTGAGAAGGAGGAAGACATAATTTATTGGCGTGTGGATCAAACCATTGAAATTCT
TAGATTCGTTGCTAGAAGGGCTAATGGCTTCGCAGAATGGGCAGCTGAACTAAGAGTCAATATTTCTCCGATGCAACCTAACGCAGATGACTTGAATAGGTTTCTAAGGA
TGATATGCAAAGAACTTGGGCATCTTGGAATAAAAATAGCTCGCAACATTCCAATTCACCATCCCTACAATACAAAATCTAAAAGTCGAATCATGGAAGAGCAAGGCAAG
GATATGGAGAAAATGAAACAAGAGATCAATAATCTTAGTGAACAAGTAGCAAAAATTCTAGAATTACTTTCAACTGGGAAAGGAAAATGGGTTGTAGAAGCAGCACAGGC
AAGCAATCCAATCCAGGAAATCGATGATCCTGCTTATCCACCTGGATTTACTCCTCAACATCGGTGTGACGCCCGGACAACACTCAACAGAGAATTGCTTCGCTTTGAAA
AAAAGGTGCAAACCTTAATCAATGCTGGATGGTTAAACTTTAAGAAAGCTAGTGAAAATTTGGATATCAACAATAACTCATTACCTAATCATGAGAACCCAAAAGTGAAT
GTTGTAGATTATCGACCCTACAGTAAGATATGA
Protein sequenceShow/hide protein sequence
MSNVSMHSSLEPKYDEPGVVLQWAEKIKQKFGDSLTDSSHISLPTSCQISFTQNDLTKLKAIWEGLSPERRFVFSKKYGHIADLMYIPANHFTLRAVVHFWYPAYHCFTF
GSFDLLPTIKEYQAMLSIPEKEEDIIYWRVDQTIEILRFVARRANGFAEWAAELRVNISPMQPNADDLNRFLRMICKELGHLGIKIARNIPIHHPYNTKSKSRIMEEQGK
DMEKMKQEINNLSEQVAKILELLSTGKGKWVVEAAQASNPIQEIDDPAYPPGFTPQHRCDARTTLNRELLRFEKKVQTLINAGWLNFKKASENLDINNNSLPNHENPKVN
VVDYRPYSKI