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Spg019997 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg019997
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold5:31585808..31589627
RNA-Seq ExpressionSpg019997
SyntenySpg019997
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041264.1 hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa]9.1e-0535.79Show/hide
Query:  VSFSSIDINRVYQIKALLHLRGNDAIKNPSAKQLKEALKIVARKGVQWKESQTKVKTLVPSDLKPEPRVWLHFIINRLMSTTHDSTTSVERVIMI
        V F    IN +Y +K   +  G+   +NP A+ L++AL+ +   G +W    T+   L P+DL  E  VWL FI   +M T HDST S+E ++++
Subjt:  VSFSSIDINRVYQIKALLHLRGNDAIKNPSAKQLKEALKIVARKGVQWKESQTKVKTLVPSDLKPEPRVWLHFIINRLMSTTHDSTTSVERVIMI

XP_038876674.1 chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]2.5e-1040.86Show/hide
Query:  VSFSSIDINRVYQIKALLHLRGNDAIKNPSAKQLKEALKIVARKGVQWKESQTKVKTLVPSDLKPEPRVWLHFIINRLMSTTHDSTTSVERVI
        VSFS+ DIN +YQ+K   +  GN  I +P+ +Q+++AL+++ + G++W  S   V TL    L  E R+W++ +  RL+STTHD T S +RV+
Subjt:  VSFSSIDINRVYQIKALLHLRGNDAIKNPSAKQLKEALKIVARKGVQWKESQTKVKTLVPSDLKPEPRVWLHFIINRLMSTTHDSTTSVERVI

XP_038888747.1 vicilin-like seed storage protein At2g18540 [Benincasa hispida]1.8e-0836.36Show/hide
Query:  VSFSSIDINRVYQIKALLHLRGNDAIKNPSAKQLKEALKIVARKGVQWKESQTKVKTLVPSDLKPEPRVWLHFIINRLMSTTHDSTTS
        V FS+ DIN +Y++K +L   GN  I +P    +++ L+++ + G QW  S   +KTL  + L PE R+W++ +  RL+ T+H+ T S
Subjt:  VSFSSIDINRVYQIKALLHLRGNDAIKNPSAKQLKEALKIVARKGVQWKESQTKVKTLVPSDLKPEPRVWLHFIINRLMSTTHDSTTS

XP_038898613.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120086174 [Benincasa hispida]1.4e-0532.97Show/hide
Query:  VSFSSIDINRVYQIKALLHLRGNDAIKNPSAKQLKEALKIVARKGVQWKESQTKVKTLVPSDLKPEPRVWLHFIINRLMSTTHDSTTSVER
        V FS+ +IN +YQ++      GN  I +P+ + ++ ALK++A+ G +W  S   ++TL    L  + R+W++ +  +L+ TTHD T S ++
Subjt:  VSFSSIDINRVYQIKALLHLRGNDAIKNPSAKQLKEALKIVARKGVQWKESQTKVKTLVPSDLKPEPRVWLHFIINRLMSTTHDSTTSVER

XP_038904385.1 uncharacterized protein LOC120090747 [Benincasa hispida]7.2e-1037.23Show/hide
Query:  MVSFSSIDINRVYQIKALLHLRGNDAIKNPSAKQLKEALKIVARKGVQWKESQTKVKTLVPSDLKPEPRVWLHFIINRLMSTTHDSTTSVERVI
        +V FS+ DIN +Y++K +    GN  I +P  +++++AL+ + + G QW  S   +KTL  S L PE R+W++ +  R++ T+HD T S +RV+
Subjt:  MVSFSSIDINRVYQIKALLHLRGNDAIKNPSAKQLKEALKIVARKGVQWKESQTKVKTLVPSDLKPEPRVWLHFIINRLMSTTHDSTTSVERVI

TrEMBL top hitse value%identityAlignment
A0A5A7U0U4 Uncharacterized protein1.3e-0433.68Show/hide
Query:  VSFSSIDINRVYQIKALLHLRGNDAIKNPSAKQLKEALKIVARKGVQWKESQTKVKTLVPSDLKPEPRVWLHFIINRLMSTTHDSTTSVERVIMI
        ++F    IN +Y +K   +  G+   KNP  + L+EAL+     G +W +  T +  L P +L  E  VWL FI   +M T HD+  S+ER++++
Subjt:  VSFSSIDINRVYQIKALLHLRGNDAIKNPSAKQLKEALKIVARKGVQWKESQTKVKTLVPSDLKPEPRVWLHFIINRLMSTTHDSTTSVERVIMI

A0A5D3CW17 Uncharacterized protein4.4e-0535.79Show/hide
Query:  VSFSSIDINRVYQIKALLHLRGNDAIKNPSAKQLKEALKIVARKGVQWKESQTKVKTLVPSDLKPEPRVWLHFIINRLMSTTHDSTTSVERVIMI
        V F    IN +Y +K   +  G+   +NP A+ L++AL+ +   G +W    T+   L P+DL  E  VWL FI   +M T HDST S+E ++++
Subjt:  VSFSSIDINRVYQIKALLHLRGNDAIKNPSAKQLKEALKIVARKGVQWKESQTKVKTLVPSDLKPEPRVWLHFIINRLMSTTHDSTTSVERVIMI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGTTTTTCTTCGATTGACATTAACAGGGTATATCAGATCAAAGCTCTGTTGCATCTGAGAGGGAACGATGCCATTAAAAACCCTTCGGCCAAGCAGTTAAAAGA
AGCATTGAAGATAGTGGCCAGGAAGGGAGTCCAGTGGAAGGAGTCTCAGACCAAAGTGAAGACACTAGTGCCAAGTGACTTAAAGCCAGAACCGAGAGTGTGGCTTCACT
TCATCATAAACAGATTGATGTCCACCACCCATGATAGTACCACTTCAGTAGAAAGGGTTATAATGATAAAAGAAACTATCTCAATTATGTTTGAGAACTCCCCTTATTTC
AGTTATGCTTTTCTACAGCATCATGAAAGGGTTGGAGATCAATATAGGGAGCATCATCAGAGAAGAGATCCTGTCCTGTGGGAGAAAGAGAGCGGGGAAGCTGTTTTTTG
GCACAATCCTGTTTCAGGGCCTACACCATCATCAAAGGCCCTTGTATTTGCCTACCTCCAGCTAGTCTGCATTGAAGATAAGCTGAAAACATATTGGGTCTATGCGAAGG
AAAGATATGAAGCAATTAAAGAGTTCTATCTCTCTATCGCCCCGAGCATCACTCTTCTTTTCCCTAACTTCCCTCAAGCCTTGCTACCTGATAACTCTCCAAAAGGGAAA
TATAATGCTGAGCGACATGAGGGAGCAAAATCTGTGATCCAGCAAAGCAGGGAGCAAAACTGTGATTCATTAAATGAGGTGGCGTTATCTGAAGAAGAAGCCATCTCAAG
TAAAAAACATTCAAATTTCGAGAAAGGAAAGTCTTATTCCATTCGTGGAGGCTTACTTTCCATCTTTGGAAGCCGAATAGAGGAGGAAAGATTGGAGACTTCAAGAAGAC
CATCAACTATGGATCTAATCAAGGGAATTAATCTTGAGCTATGTGTGAGATTGGTGCATGAGCAATTGATTGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGAGTTTTTCTTCGATTGACATTAACAGGGTATATCAGATCAAAGCTCTGTTGCATCTGAGAGGGAACGATGCCATTAAAAACCCTTCGGCCAAGCAGTTAAAAGA
AGCATTGAAGATAGTGGCCAGGAAGGGAGTCCAGTGGAAGGAGTCTCAGACCAAAGTGAAGACACTAGTGCCAAGTGACTTAAAGCCAGAACCGAGAGTGTGGCTTCACT
TCATCATAAACAGATTGATGTCCACCACCCATGATAGTACCACTTCAGTAGAAAGGGTTATAATGATAAAAGAAACTATCTCAATTATGTTTGAGAACTCCCCTTATTTC
AGTTATGCTTTTCTACAGCATCATGAAAGGGTTGGAGATCAATATAGGGAGCATCATCAGAGAAGAGATCCTGTCCTGTGGGAGAAAGAGAGCGGGGAAGCTGTTTTTTG
GCACAATCCTGTTTCAGGGCCTACACCATCATCAAAGGCCCTTGTATTTGCCTACCTCCAGCTAGTCTGCATTGAAGATAAGCTGAAAACATATTGGGTCTATGCGAAGG
AAAGATATGAAGCAATTAAAGAGTTCTATCTCTCTATCGCCCCGAGCATCACTCTTCTTTTCCCTAACTTCCCTCAAGCCTTGCTACCTGATAACTCTCCAAAAGGGAAA
TATAATGCTGAGCGACATGAGGGAGCAAAATCTGTGATCCAGCAAAGCAGGGAGCAAAACTGTGATTCATTAAATGAGGTGGCGTTATCTGAAGAAGAAGCCATCTCAAG
TAAAAAACATTCAAATTTCGAGAAAGGAAAGTCTTATTCCATTCGTGGAGGCTTACTTTCCATCTTTGGAAGCCGAATAGAGGAGGAAAGATTGGAGACTTCAAGAAGAC
CATCAACTATGGATCTAATCAAGGGAATTAATCTTGAGCTATGTGTGAGATTGGTGCATGAGCAATTGATTGGTTAG
Protein sequenceShow/hide protein sequence
MVSFSSIDINRVYQIKALLHLRGNDAIKNPSAKQLKEALKIVARKGVQWKESQTKVKTLVPSDLKPEPRVWLHFIINRLMSTTHDSTTSVERVIMIKETISIMFENSPYF
SYAFLQHHERVGDQYREHHQRRDPVLWEKESGEAVFWHNPVSGPTPSSKALVFAYLQLVCIEDKLKTYWVYAKERYEAIKEFYLSIAPSITLLFPNFPQALLPDNSPKGK
YNAERHEGAKSVIQQSREQNCDSLNEVALSEEEAISSKKHSNFEKGKSYSIRGGLLSIFGSRIEEERLETSRRPSTMDLIKGINLELCVRLVHEQLIG