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Spg020009 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020009
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein of unknown function, DUF584
Genome locationscaffold5:28697687..28701807
RNA-Seq ExpressionSpg020009
SyntenySpg020009
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR007608 - Senescence regulator S40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN64943.1 hypothetical protein Csa_022813 [Cucumis sativus]2.1e-4294.06Show/hide
Query:  MIPTIPKPPLERLPLPISTSLKYQSAPVNVPIMSKA-VQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR
        MIPTIPKPPL+RLPLPISTSLKYQSAPVNVPIMSKA VQR  E+DVDDVDE DGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR
Subjt:  MIPTIPKPPLERLPLPISTSLKYQSAPVNVPIMSKA-VQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR

Query:  T
        T
Subjt:  T

XP_022142671.1 homeobox protein vnd-like [Momordica charantia]6.4e-4493Show/hide
Query:  MIPTIPKPPLERLPLPISTSLKYQSAPVNVPIMSKAVQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRT
        MIPTIPKPPLERLPLPIS SLKYQSAPVNVPIMSK VQRH E+DVDD+DEGDGEMLPPHE VARSLAQSP+LSCSVLEGAGRTLKGRDLRQVRNAVWRRT
Subjt:  MIPTIPKPPLERLPLPISTSLKYQSAPVNVPIMSKAVQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRT

XP_022945942.1 uncharacterized protein LOC111450033 [Cucurbita moschata]4.1e-4394.06Show/hide
Query:  MIPTIPKPPLERLPLPISTSLKYQSAPVNVPIMSK-AVQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR
        MIPTIPKPPLERLPLPIS+SLKYQSAPVNVP+MSK AVQRH EIDVDDVDE DGEMLPPHEIVARSLAQSP+LSCSVLEGAGRTLKGRDLRQVRNAVWRR
Subjt:  MIPTIPKPPLERLPLPISTSLKYQSAPVNVPIMSK-AVQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR

Query:  T
        T
Subjt:  T

XP_023522766.1 uncharacterized protein LOC111786770 [Cucurbita pepo subsp. pepo]4.1e-4394.06Show/hide
Query:  MIPTIPKPPLERLPLPISTSLKYQSAPVNVPIMSK-AVQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR
        MIPTIPKPPLERLPLPIS+SLKYQSAPVNVP+MSK AVQRH EIDVDDVDE DGEMLPPHEIVARSLAQSP+LSCSVLEGAGRTLKGRDLRQVRNAVWRR
Subjt:  MIPTIPKPPLERLPLPISTSLKYQSAPVNVPIMSK-AVQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR

Query:  T
        T
Subjt:  T

XP_038894579.1 uncharacterized protein LOC120083099 [Benincasa hispida]2.1e-4294.06Show/hide
Query:  MIPTIPKPPLERLPLPISTSLKYQSAPVNVPIMSKA-VQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR
        MIPTIPKPPLERLPLPIS+SLKYQSAPVNVPIMSKA VQR  EIDVDDVDE DGEMLPPHEIVARSLAQSP+LSCSVLEGAGRTLKGRDLRQVRNAVWRR
Subjt:  MIPTIPKPPLERLPLPISTSLKYQSAPVNVPIMSKA-VQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR

Query:  T
        T
Subjt:  T

TrEMBL top hitse value%identityAlignment
A0A0A0LT40 Uncharacterized protein9.9e-4394.06Show/hide
Query:  MIPTIPKPPLERLPLPISTSLKYQSAPVNVPIMSKA-VQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR
        MIPTIPKPPL+RLPLPISTSLKYQSAPVNVPIMSKA VQR  E+DVDDVDE DGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR
Subjt:  MIPTIPKPPLERLPLPISTSLKYQSAPVNVPIMSKA-VQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR

Query:  T
        T
Subjt:  T

A0A1S4E4F1 uncharacterized protein LOC1034998841.1e-4193.07Show/hide
Query:  MIPTIPKPPLERLPLPISTSLKYQSAPVNVPIMSKA-VQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR
        MIPTIPKPPL+RLPLPISTSLKYQSAPVNVPIMSKA VQR  E+DVD VDE DGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR
Subjt:  MIPTIPKPPLERLPLPISTSLKYQSAPVNVPIMSKA-VQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR

Query:  T
        T
Subjt:  T

A0A6J1CMW3 homeobox protein vnd-like3.1e-4493Show/hide
Query:  MIPTIPKPPLERLPLPISTSLKYQSAPVNVPIMSKAVQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRT
        MIPTIPKPPLERLPLPIS SLKYQSAPVNVPIMSK VQRH E+DVDD+DEGDGEMLPPHE VARSLAQSP+LSCSVLEGAGRTLKGRDLRQVRNAVWRRT
Subjt:  MIPTIPKPPLERLPLPISTSLKYQSAPVNVPIMSKAVQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRT

A0A6J1G2B0 uncharacterized protein LOC1114500332.0e-4394.06Show/hide
Query:  MIPTIPKPPLERLPLPISTSLKYQSAPVNVPIMSK-AVQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR
        MIPTIPKPPLERLPLPIS+SLKYQSAPVNVP+MSK AVQRH EIDVDDVDE DGEMLPPHEIVARSLAQSP+LSCSVLEGAGRTLKGRDLRQVRNAVWRR
Subjt:  MIPTIPKPPLERLPLPISTSLKYQSAPVNVPIMSK-AVQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR

Query:  T
        T
Subjt:  T

A0A6J1HPU4 uncharacterized protein LOC1114666061.7e-4293.07Show/hide
Query:  MIPTIPKPPLERLPLPISTSLKYQSAPVNVPIMSK-AVQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR
        MIPTIPKPPLERLPL IS+SLKYQSAPVNVP+MSK AVQRH EIDVDDVDE DGEMLPPHEIVARSLAQSP+LSCSVLEGAGRTLKGRDLRQVRNAVWRR
Subjt:  MIPTIPKPPLERLPLPISTSLKYQSAPVNVPIMSK-AVQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR

Query:  T
        T
Subjt:  T

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G11700.1 Protein of unknown function, DUF5846.9e-1248.81Show/hide
Query:  SAPVNVPIMSK-----AVQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLS---CSVLEGAGRTLKGRDLRQVRNAVWRRT
        SAPVNVP  SK     +V+  HE D ++ +E  G M+PPHE +A+S  +    S    SV EG GRTLKGR+LR+VR+A+W +T
Subjt:  SAPVNVPIMSK-----AVQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLS---CSVLEGAGRTLKGRDLRQVRNAVWRRT

AT1G61930.1 Protein of unknown function, DUF5848.1e-1345.88Show/hide
Query:  SAPVNVPIMSK-----AVQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPML----SCSVLEGAGRTLKGRDLRQVRNAVWRRT
        SAPVNVP  SK     +V+  HE+D +D ++ +  M+PPHE +A+S A+          SV +G GRTLKGR+LR+VR+A+W +T
Subjt:  SAPVNVPIMSK-----AVQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPML----SCSVLEGAGRTLKGRDLRQVRNAVWRRT

AT3G15040.1 Protein of unknown function, DUF5841.4e-2866.06Show/hide
Query:  IPTIPKPPLERLPLPIS--TSLKY-QSAPVNVPIMSKAVQRHH-------EIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQ
        IPT PKPP ERLP   S     KY QSAPV VP++S A+   H       ++  DD +E +GEMLPPHEIVARSLAQS +LSCSVLEGAGRTLKGRDLRQ
Subjt:  IPTIPKPPLERLPLPIS--TSLKY-QSAPVNVPIMSKAVQRHH-------EIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQ

Query:  VRNAVWRRT
        VRNAV+RRT
Subjt:  VRNAVWRRT

AT4G04630.1 Protein of unknown function, DUF5841.6e-1346.74Show/hide
Query:  TSLKYQSAPVNVPIMSK----------AVQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRT
        + +K  SAP+NVP  SK          +   H     DD ++ DG M+PPHE VAR LA++ + S S+ EG GRTLKGRDL +VRNAV  +T
Subjt:  TSLKYQSAPVNVPIMSK----------AVQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRT

AT4G21970.1 Protein of unknown function, DUF5842.1e-1346.74Show/hide
Query:  ISTSLKYQSAPVNVPIMSKAV--------QRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRT
        +S   K  SAP+N+P  SK             H   +DD DE  G M+PPHE+VA+ LA++ + S S+ EG GRTLKGRDL + RNAV  RT
Subjt:  ISTSLKYQSAPVNVPIMSKAV--------QRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCCCACCATCCCTAAACCTCCCTTGGAGCGATTGCCCTTGCCCATTTCTACCTCGTTGAAGTACCAGTCCGCTCCGGTAAATGTGCCCATAATGTCCAAGGCGGT
TCAGAGACACCACGAGATCGATGTGGATGATGTTGATGAAGGAGATGGGGAGATGTTGCCGCCGCATGAGATTGTCGCCAGAAGTTTGGCTCAGTCGCCGATGTTGTCTT
GCTCGGTGCTCGAGGGCGCTGGAAGAACGTTAAAGGGCAGGGATCTTCGCCAGGTTCGCAACGCGGTTTGGAGACGAACAGTCAGAAGGTCGTTCTTTTCTATTCTCTTC
CATTACAATAGTTCCATCGGAGTTTTGGGATTCTACACAAGTTATTGGGCACAAGCCTTACAATGCCATAGCTTGACTTTCTTCATAAAGGGAGGCCAAGTCACCTCTAT
GATTTCTGTACAATCATGTGCTCCGATGTCTGCTTCCTCTTGTCCTGTTCTTGAACAACTTTCATTCTCCATCAGGCAGTTGAGAATTTCAGGTCTTAAAGAGAAACAAG
GCTGGGGTCATACTTTTCCAAATTTGTCATGGGAGAAAATTGGCTTGGGCTGTGGTTTCAGACAG
mRNA sequenceShow/hide mRNA sequence
ATGATTCCCACCATCCCTAAACCTCCCTTGGAGCGATTGCCCTTGCCCATTTCTACCTCGTTGAAGTACCAGTCCGCTCCGGTAAATGTGCCCATAATGTCCAAGGCGGT
TCAGAGACACCACGAGATCGATGTGGATGATGTTGATGAAGGAGATGGGGAGATGTTGCCGCCGCATGAGATTGTCGCCAGAAGTTTGGCTCAGTCGCCGATGTTGTCTT
GCTCGGTGCTCGAGGGCGCTGGAAGAACGTTAAAGGGCAGGGATCTTCGCCAGGTTCGCAACGCGGTTTGGAGACGAACAGTCAGAAGGTCGTTCTTTTCTATTCTCTTC
CATTACAATAGTTCCATCGGAGTTTTGGGATTCTACACAAGTTATTGGGCACAAGCCTTACAATGCCATAGCTTGACTTTCTTCATAAAGGGAGGCCAAGTCACCTCTAT
GATTTCTGTACAATCATGTGCTCCGATGTCTGCTTCCTCTTGTCCTGTTCTTGAACAACTTTCATTCTCCATCAGGCAGTTGAGAATTTCAGGTCTTAAAGAGAAACAAG
GCTGGGGTCATACTTTTCCAAATTTGTCATGGGAGAAAATTGGCTTGGGCTGTGGTTTCAGACAG
Protein sequenceShow/hide protein sequence
MIPTIPKPPLERLPLPISTSLKYQSAPVNVPIMSKAVQRHHEIDVDDVDEGDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTVRRSFFSILF
HYNSSIGVLGFYTSYWAQALQCHSLTFFIKGGQVTSMISVQSCAPMSASSCPVLEQLSFSIRQLRISGLKEKQGWGHTFPNLSWEKIGLGCGFRQ