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Spg020072 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020072
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold1:27702441..27705375
RNA-Seq ExpressionSpg020072
SyntenySpg020072
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022159345.1 uncharacterized protein LOC111025764 [Momordica charantia]1.8e-0465.31Show/hide
Query:  QNKQALPQQNSESSLEAMMKEYMARTDAAIQSNLASMRALELQVGQLAS
        Q  Q  P QN+ S+LE MMKEYMARTDA IQS  ASMR  E Q+GQLA+
Subjt:  QNKQALPQQNSESSLEAMMKEYMARTDAAIQSNLASMRALELQVGQLAS

XP_023522102.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111785979 [Cucurbita pepo subsp. pepo]9.3e-0639.84Show/hide
Query:  AKSVLEQSKEQNCHVTARVSLVHERSAWG-KVKSVLEVDGVSTIRADIAMLANVLKNVTVFSHQQPPA-VESAAVVLLQQNKQALPQQNSESSLEAMMKE
        A  +LE+    NC           RS  G K + VLEVD +S+I A +A + N+L+N+ +       A V +AAV+          Q  +ES   +++KE
Subjt:  AKSVLEQSKEQNCHVTARVSLVHERSAWG-KVKSVLEVDGVSTIRADIAMLANVLKNVTVFSHQQPPA-VESAAVVLLQQNKQALPQQNSESSLEAMMKE

Query:  YMARTDAAIQSNLASMRALELQVGQLAS
        YMA+ DAAIQS  AS+R LE+QVGQLA+
Subjt:  YMARTDAAIQSNLASMRALELQVGQLAS

XP_030494802.1 uncharacterized protein LOC115710583 [Cannabis sativa]6.7e-0430.77Show/hide
Query:  KVKSVLEVDGVSTIRADIAMLANVLKNVTVFSHQQPPAVESAAVVLL-------------------------------QQNKQAL---------------
        KV  VLEVD ++ + A +A + N+LKN+ +    QP A    A +                                  Q KQ+                
Subjt:  KVKSVLEVDGVSTIRADIAMLANVLKNVTVFSHQQPPAVESAAVVLL-------------------------------QQNKQAL---------------

Query:  PQQNSESSLEAMMKEYMARTDAAIQSNLASMRALELQVGQLAS
        PQ +  SSLE++M++YMA+ DA IQS  AS++ LE+Q+GQLA+
Subjt:  PQQNSESSLEAMMKEYMARTDAAIQSNLASMRALELQVGQLAS

XP_030509265.1 uncharacterized protein LOC115723943 [Cannabis sativa]6.7e-0440.38Show/hide
Query:  KVKSVLEVDGVSTIRADIAMLANVLKNVT----VFSHQQPPAVESAAVV--LLQQNKQALPQQNSE-SSLEAMMKEYMARTDAAIQSNLASMRALELQVG
        KV  VLEVD ++ + A +A + N   N++      S    PA    A      QQ + +   QN++ SSLE++M++YMA+ DA IQS  AS+R LELQ+G
Subjt:  KVKSVLEVDGVSTIRADIAMLANVLKNVT----VFSHQQPPAVESAAVV--LLQQNKQALPQQNSE-SSLEAMMKEYMARTDAAIQSNLASMRALELQVG

Query:  QLAS
         LA+
Subjt:  QLAS

TrEMBL top hitse value%identityAlignment
A0A6J1DYG0 uncharacterized protein LOC1110257648.5e-0565.31Show/hide
Query:  QNKQALPQQNSESSLEAMMKEYMARTDAAIQSNLASMRALELQVGQLAS
        Q  Q  P QN+ S+LE MMKEYMARTDA IQS  ASMR  E Q+GQLA+
Subjt:  QNKQALPQQNSESSLEAMMKEYMARTDAAIQSNLASMRALELQVGQLAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGTATCGGGTGGACAAAAATATATCTACAGTGACGGGAGTGCAACGACGGGCTATAGTGGAGTGTCACAATATATTGCTGAGCGACTTGAGGGAGCAAAATCTGT
GCTGGAGCAAAGCAAGGAGCAAAACTGCCACGTCACAGCTCGTGTGAGTTTGGTGCATGAGCGATCCGCCTGGGGTAAGGTTAAGAGTGTGTTAGAGGTTGATGGTGTGT
CCACCATTAGGGCTGATATTGCAATGTTAGCTAACGTTCTTAAAAATGTGACAGTGTTTAGTCATCAACAGCCGCCAGCTGTGGAGTCTGCTGCGGTGGTATTGCTCCAG
CAGAATAAGCAGGCTTTGCCCCAGCAAAATTCGGAGAGTTCTCTTGAGGCAATGATGAAAGAATATATGGCTCGTACAGATGCCGCAATTCAGAGTAATCTAGCTTCAAT
GAGAGCCCTGGAATTGCAAGTGGGTCAGCTAGCTTCCTTCAGACACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGTATCGGGTGGACAAAAATATATCTACAGTGACGGGAGTGCAACGACGGGCTATAGTGGAGTGTCACAATATATTGCTGAGCGACTTGAGGGAGCAAAATCTGT
GCTGGAGCAAAGCAAGGAGCAAAACTGCCACGTCACAGCTCGTGTGAGTTTGGTGCATGAGCGATCCGCCTGGGGTAAGGTTAAGAGTGTGTTAGAGGTTGATGGTGTGT
CCACCATTAGGGCTGATATTGCAATGTTAGCTAACGTTCTTAAAAATGTGACAGTGTTTAGTCATCAACAGCCGCCAGCTGTGGAGTCTGCTGCGGTGGTATTGCTCCAG
CAGAATAAGCAGGCTTTGCCCCAGCAAAATTCGGAGAGTTCTCTTGAGGCAATGATGAAAGAATATATGGCTCGTACAGATGCCGCAATTCAGAGTAATCTAGCTTCAAT
GAGAGCCCTGGAATTGCAAGTGGGTCAGCTAGCTTCCTTCAGACACTGA
Protein sequenceShow/hide protein sequence
MVVSGGQKYIYSDGSATTGYSGVSQYIAERLEGAKSVLEQSKEQNCHVTARVSLVHERSAWGKVKSVLEVDGVSTIRADIAMLANVLKNVTVFSHQQPPAVESAAVVLLQ
QNKQALPQQNSESSLEAMMKEYMARTDAAIQSNLASMRALELQVGQLASFRH