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Spg020080 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020080
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold1:26900301..26902826
RNA-Seq ExpressionSpg020080
SyntenySpg020080
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041962.1 reverse transcriptase [Cucumis melo var. makuwa]1.1e-0946.43Show/hide
Query:  IKALLAPKDGMPIQELIMRVENLEGKATRPSSFERGDNLTGSVAQMEERVDDLDSSQKAIAQMVTELSEDEVNPCDLALPRVGD
        I A+    +G+PIQ+L+ RV+ LEG   R  S ERGD+ TGSVA +EERV +LDSSQK + +M+  +SED +   D+    + D
Subjt:  IKALLAPKDGMPIQELIMRVENLEGKATRPSSFERGDNLTGSVAQMEERVDDLDSSQKAIAQMVTELSEDEVNPCDLALPRVGD

KAA0049646.1 reverse transcriptase [Cucumis melo var. makuwa]4.1e-0940.78Show/hide
Query:  IKALLAPKDGMPIQELIMRVENLEGKATRPSSFERGDNLTGSVAQMEERVDDLDSSQKAIAQMVTELSEDEVNPCDLALPRVGDETETEEVIVTPPNQEA
        I A+ A  + +PIQEL+ RV+ LEG   R  ++E GD+L+G VA MEERV++LDSSQK + +M+ ++SED     D+    + D      + V     +A
Subjt:  IKALLAPKDGMPIQELIMRVENLEGKATRPSSFERGDNLTGSVAQMEERVDDLDSSQKAIAQMVTELSEDEVNPCDLALPRVGDETETEEVIVTPPNQEA

Query:  GTR
         TR
Subjt:  GTR

KAA0054039.1 Gag-pro-like protein [Cucumis melo var. makuwa]5.4e-0942Show/hide
Query:  RTIACESRKSAIVTVGIKALLAPKDGMPIQELIMRVENLEGKATRPSSFERGDNLTGSVAQMEERVDDLDSSQKAIAQMVTELSEDEVNPCDLALPRVGD
        R +     K A  T  I A+    +G+PIQ L+ RV+ LEG A R  S ERG++LTGSVA +EERV +LD+SQK + +M+ ++ ED     D+    + D
Subjt:  RTIACESRKSAIVTVGIKALLAPKDGMPIQELIMRVENLEGKATRPSSFERGDNLTGSVAQMEERVDDLDSSQKAIAQMVTELSEDEVNPCDLALPRVGD

KAA0062302.1 uncharacterized protein E6C27_scaffold154G00490 [Cucumis melo var. makuwa]1.4e-0935.37Show/hide
Query:  ESRKSAIV--TVGIKALLAPKDGMPIQELIMRVENLEGKATRPSSFERGDNLTGSVAQMEERVDDLDSSQKAIAQMVTELSEDEVNPCDLALPRVGDETE
        ESR   I   T  I A++   +G+PIQEL+ RV  L+G   R SS ERGD+  GSVA +EERV +LDSSQK + +M+ ++ ED     D+    + D   
Subjt:  ESRKSAIV--TVGIKALLAPKDGMPIQELIMRVENLEGKATRPSSFERGDNLTGSVAQMEERVDDLDSSQKAIAQMVTELSEDEVNPCDLALPRVGDETE

Query:  TEEVIVTPPNQE--AGTRIEDRISSLITTSPFIVLLDVSPHDHFMDD
          ++ +     +  AG  I   I  +    PF    DV   ++++ D
Subjt:  TEEVIVTPPNQE--AGTRIEDRISSLITTSPFIVLLDVSPHDHFMDD

KAA0066681.1 uncharacterized protein E6C27_scaffold271G00090 [Cucumis melo var. makuwa]3.2e-0951.81Show/hide
Query:  ESRKSAIV--TVGIKALLAPKDGMPIQELIMRVENLEGKATRPSSFERGDNLTGSVAQMEERVDDLDSSQKAIAQMVTELSED
        ESR   I   T  I A+    +G+PIQEL+ RV+ LEG   R  S ERGD+ TGSVA +EERV +LDSSQK + +M+   SED
Subjt:  ESRKSAIV--TVGIKALLAPKDGMPIQELIMRVENLEGKATRPSSFERGDNLTGSVAQMEERVDDLDSSQKAIAQMVTELSED

TrEMBL top hitse value%identityAlignment
A0A5A7TEV3 Reverse transcriptase5.3e-1046.43Show/hide
Query:  IKALLAPKDGMPIQELIMRVENLEGKATRPSSFERGDNLTGSVAQMEERVDDLDSSQKAIAQMVTELSEDEVNPCDLALPRVGD
        I A+    +G+PIQ+L+ RV+ LEG   R  S ERGD+ TGSVA +EERV +LDSSQK + +M+  +SED +   D+    + D
Subjt:  IKALLAPKDGMPIQELIMRVENLEGKATRPSSFERGDNLTGSVAQMEERVDDLDSSQKAIAQMVTELSEDEVNPCDLALPRVGD

A0A5A7U668 Reverse transcriptase2.0e-0940.78Show/hide
Query:  IKALLAPKDGMPIQELIMRVENLEGKATRPSSFERGDNLTGSVAQMEERVDDLDSSQKAIAQMVTELSEDEVNPCDLALPRVGDETETEEVIVTPPNQEA
        I A+ A  + +PIQEL+ RV+ LEG   R  ++E GD+L+G VA MEERV++LDSSQK + +M+ ++SED     D+    + D      + V     +A
Subjt:  IKALLAPKDGMPIQELIMRVENLEGKATRPSSFERGDNLTGSVAQMEERVDDLDSSQKAIAQMVTELSEDEVNPCDLALPRVGDETETEEVIVTPPNQEA

Query:  GTR
         TR
Subjt:  GTR

A0A5A7UKK2 Gag-pro-like protein2.6e-0942Show/hide
Query:  RTIACESRKSAIVTVGIKALLAPKDGMPIQELIMRVENLEGKATRPSSFERGDNLTGSVAQMEERVDDLDSSQKAIAQMVTELSEDEVNPCDLALPRVGD
        R +     K A  T  I A+    +G+PIQ L+ RV+ LEG A R  S ERG++LTGSVA +EERV +LD+SQK + +M+ ++ ED     D+    + D
Subjt:  RTIACESRKSAIVTVGIKALLAPKDGMPIQELIMRVENLEGKATRPSSFERGDNLTGSVAQMEERVDDLDSSQKAIAQMVTELSEDEVNPCDLALPRVGD

A0A5D3DTJ0 Asp_protease domain-containing protein6.9e-1035.37Show/hide
Query:  ESRKSAIV--TVGIKALLAPKDGMPIQELIMRVENLEGKATRPSSFERGDNLTGSVAQMEERVDDLDSSQKAIAQMVTELSEDEVNPCDLALPRVGDETE
        ESR   I   T  I A++   +G+PIQEL+ RV  L+G   R SS ERGD+  GSVA +EERV +LDSSQK + +M+ ++ ED     D+    + D   
Subjt:  ESRKSAIV--TVGIKALLAPKDGMPIQELIMRVENLEGKATRPSSFERGDNLTGSVAQMEERVDDLDSSQKAIAQMVTELSEDEVNPCDLALPRVGDETE

Query:  TEEVIVTPPNQE--AGTRIEDRISSLITTSPFIVLLDVSPHDHFMDD
          ++ +     +  AG  I   I  +    PF    DV   ++++ D
Subjt:  TEEVIVTPPNQE--AGTRIEDRISSLITTSPFIVLLDVSPHDHFMDD

A0A5D3DVV7 Retrotrans_gag domain-containing protein1.5e-0951.81Show/hide
Query:  ESRKSAIV--TVGIKALLAPKDGMPIQELIMRVENLEGKATRPSSFERGDNLTGSVAQMEERVDDLDSSQKAIAQMVTELSED
        ESR   I   T  I A+    +G+PIQEL+ RV+ LEG   R  S ERGD+ TGSVA +EERV +LDSSQK + +M+   SED
Subjt:  ESRKSAIV--TVGIKALLAPKDGMPIQELIMRVENLEGKATRPSSFERGDNLTGSVAQMEERVDDLDSSQKAIAQMVTELSED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCTTCGCCTGCAATCGACGATGTCGTTGCCGCATGCCTCATGGGATATCGTCACGCTCTGTGTCACGGTCATGCTTGTCCAGGACATGTTGCCCATGGCCGCATG
CCCATGTCAACCCATTCCCTTAATGCTTTCGTTACATCCTGCCAAGGCTAAAATGCTTAAGGGGGGTACGACTAGTTGTCAATCCTTCCTACCCGGAGTTGTTCGCTATC
AAGCTGTTAATGGGGGTGGAGGTTGCGAAATAGGCACTTTGTGCCACCGGCGATCTGAAATCGAGTTGGCTGACTTACTCGTGGGCGAGAGTAAGTGCCGCACAATCGCT
TGCGAGTCCCGAAAGAGTGCGATTGTGACAGTTGGTATCAAAGCATTGTTGGCTCCTAAAGATGGGATGCCCATCCAAGAGTTGATAATGAGGGTTGAGAACCTCGAAGG
AAAAGCTACAAGACCTAGTAGCTTCGAGCGTGGGGACAACTTGACGGGCTCTGTTGCCCAGATGGAGGAGCGTGTCGACGACTTAGACAGCTCCCAAAAAGCAATAGCTC
AGATGGTCACAGAATTGTCTGAAGATGAAGTAAACCCATGCGATCTAGCTCTCCCAAGAGTGGGGGATGAGACAGAAACAGAGGAAGTAATTGTAACCCCTCCCAACCAA
GAGGCGGGAACTCGTATCGAGGATCGAATCAGCAGCCTTATAACGACAAGCCCCTTTATTGTTCTCTTGGACGTTTCTCCACACGATCACTTCATGGACGACCACCGAGA
TCTTCCCCGCTATTCTCCAGCCTTAGAACAGGCTTGTGGGAACCCGAGCATGATGAAATCGAAAAGAGAAAAGATGAGAGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGCTTCGCCTGCAATCGACGATGTCGTTGCCGCATGCCTCATGGGATATCGTCACGCTCTGTGTCACGGTCATGCTTGTCCAGGACATGTTGCCCATGGCCGCATG
CCCATGTCAACCCATTCCCTTAATGCTTTCGTTACATCCTGCCAAGGCTAAAATGCTTAAGGGGGGTACGACTAGTTGTCAATCCTTCCTACCCGGAGTTGTTCGCTATC
AAGCTGTTAATGGGGGTGGAGGTTGCGAAATAGGCACTTTGTGCCACCGGCGATCTGAAATCGAGTTGGCTGACTTACTCGTGGGCGAGAGTAAGTGCCGCACAATCGCT
TGCGAGTCCCGAAAGAGTGCGATTGTGACAGTTGGTATCAAAGCATTGTTGGCTCCTAAAGATGGGATGCCCATCCAAGAGTTGATAATGAGGGTTGAGAACCTCGAAGG
AAAAGCTACAAGACCTAGTAGCTTCGAGCGTGGGGACAACTTGACGGGCTCTGTTGCCCAGATGGAGGAGCGTGTCGACGACTTAGACAGCTCCCAAAAAGCAATAGCTC
AGATGGTCACAGAATTGTCTGAAGATGAAGTAAACCCATGCGATCTAGCTCTCCCAAGAGTGGGGGATGAGACAGAAACAGAGGAAGTAATTGTAACCCCTCCCAACCAA
GAGGCGGGAACTCGTATCGAGGATCGAATCAGCAGCCTTATAACGACAAGCCCCTTTATTGTTCTCTTGGACGTTTCTCCACACGATCACTTCATGGACGACCACCGAGA
TCTTCCCCGCTATTCTCCAGCCTTAGAACAGGCTTGTGGGAACCCGAGCATGATGAAATCGAAAAGAGAAAAGATGAGAGAATAA
Protein sequenceShow/hide protein sequence
MSLRLQSTMSLPHASWDIVTLCVTVMLVQDMLPMAACPCQPIPLMLSLHPAKAKMLKGGTTSCQSFLPGVVRYQAVNGGGGCEIGTLCHRRSEIELADLLVGESKCRTIA
CESRKSAIVTVGIKALLAPKDGMPIQELIMRVENLEGKATRPSSFERGDNLTGSVAQMEERVDDLDSSQKAIAQMVTELSEDEVNPCDLALPRVGDETETEEVIVTPPNQ
EAGTRIEDRISSLITTSPFIVLLDVSPHDHFMDDHRDLPRYSPALEQACGNPSMMKSKREKMRE