; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg020082 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020082
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionE3 ubiquitin-protein ligase RNF181-like
Genome locationscaffold1:27393404..27400028
RNA-Seq ExpressionSpg020082
SyntenySpg020082
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595648.1 hypothetical protein SDJN03_12201, partial [Cucurbita argyrosperma subsp. sororia]4.5e-4154.63Show/hide
Query:  MSFATSRPIQYRLYGDSNAASGEQPYQVLQLRLRYVHRLIAGSPSVGVPYRILHETAPAPLDDLLFPLPLRELPDPVFFQIYVEELLSSVGIRAAAREVM
        MSF TSRPIQYR+YG ++AASGEQPYQVLQL+LRY  R I+ SP  GV Y  L ETAP  L +LLFPL L+EL DPVF Q+YV +LLS + +R+  REV+
Subjt:  MSFATSRPIQYRLYGDSNAASGEQPYQVLQLRLRYVHRLIAGSPSVGVPYRILHETAPAPLDDLLFPLPLRELPDPVFFQIYVEELLSSVGIRAAAREVM

Query:  ARQIASYVFGMAGGDREMNFLIVAVVNNIQQ-TWMMEANP--EEESNGGAVGEETVILEEAARPARRRGVAEWAMERLRKEKLEENENGEELGDCSICLD
        A +I SY   +AGG+RE +F  V  ++ I+  TWM E +   +  SN  A GEET ILEE ARP                EK+E  ENGEE+GDCSICL+
Subjt:  ARQIASYVFGMAGGDREMNFLIVAVVNNIQQ-TWMMEANP--EEESNGGAVGEETVILEEAARPARRRGVAEWAMERLRKEKLEENENGEELGDCSICLD

Query:  EMNCN
        E+N N
Subjt:  EMNCN

KAG6595650.1 hypothetical protein SDJN03_12203, partial [Cucurbita argyrosperma subsp. sororia]3.5e-4152.78Show/hide
Query:  MSFATSRPIQYRLYGDSNAASGEQPYQVLQLRLRYVHRLIAGSPSVGVPYRILHETAPAPLDDLLFPLPLRELPDPVFFQIYVEELLSSVGIRAAAREVM
        MSF TSRPIQYR+YG ++AASGEQPYQVLQL+LRY  R I+ SP  GV Y  L ETAP  L +LLFPL L+EL DPVF Q+YV +LLS + +R+  REV+
Subjt:  MSFATSRPIQYRLYGDSNAASGEQPYQVLQLRLRYVHRLIAGSPSVGVPYRILHETAPAPLDDLLFPLPLRELPDPVFFQIYVEELLSSVGIRAAAREVM

Query:  ARQIASYVFGMAGGDREMNFLIVAVVNNIQQ-TWMMEANP--EEESNGGAVGEETVILEEAARPARRRGVAEWAMERLRKEKLEENENGEELGDCSICLD
        A +I SY   +AGG+RE +F  V  ++ I+  TWM E +   +  SN  A GEET ILEE ARP                EK+E  ENGEE+GDCSICL+
Subjt:  ARQIASYVFGMAGGDREMNFLIVAVVNNIQQ-TWMMEANP--EEESNGGAVGEETVILEEAARPARRRGVAEWAMERLRKEKLEENENGEELGDCSICLD

Query:  EMNCNCKKKESNHQTE
        E+N N   K    + E
Subjt:  EMNCNCKKKESNHQTE

XP_004144954.1 uncharacterized protein LOC101214496 [Cucumis sativus]1.2e-3044.78Show/hide
Query:  MSFATSRPIQYRLYGDSNAASGEQPYQVLQLRLRYVHRLIAGSPSVGVPYRILHETAPAPLDDLLFPLPLRELPDPVFFQIYVEELLSSVGIRAAAREVM
        MSFA S PIQYRLY      +G     VLQ+ + ++ ++I+ SP  G P+ +LH+T   P  + LF L LR+L  P+F   Y+ ++LSS+ IR AA + M
Subjt:  MSFATSRPIQYRLYGDSNAASGEQPYQVLQLRLRYVHRLIAGSPSVGVPYRILHETAPAPLDDLLFPLPLRELPDPVFFQIYVEELLSSVGIRAAAREVM

Query:  ARQIASYVFGMAGGDREMNFLIVAVVNNIQQTWMMEANPEEESNGGAVGEETVILEEAARPARRRGVAEWAMERLRKEKLEENENGEELGDCSICLDEMN
        AR+IAS++  M   + E NF I+A V+ I+  W+          GGA  EETV+L+EA  PA +RGV     ERLR E     E  EELGDCSICLDE++
Subjt:  ARQIASYVFGMAGGDREMNFLIVAVVNNIQQTWMMEANPEEESNGGAVGEETVILEEAARPARRRGVAEWAMERLRKEKLEENENGEELGDCSICLDEMN

Query:  C
        C
Subjt:  C

XP_023518048.1 uncharacterized protein LOC111781594 [Cucurbita pepo subsp. pepo]1.6e-4155.12Show/hide
Query:  MSFATSRPIQYRLYGDSNAASGEQPYQVLQLRLRYVHRLIAGSPSVGVPYRILHETAPAPLDDLLFPLPLRELPDPVFFQIYVEELLSSVGIRAAAREVM
        MSF TSRPIQYR+YG ++AASGEQPYQVLQL+L Y+ R I+ SP  GV Y  L ETAP  L +LLFPLPL+EL DPV  Q+YV +LLS + +R+ A E +
Subjt:  MSFATSRPIQYRLYGDSNAASGEQPYQVLQLRLRYVHRLIAGSPSVGVPYRILHETAPAPLDDLLFPLPLRELPDPVFFQIYVEELLSSVGIRAAAREVM

Query:  ARQIASYVFGMAGGDREMNFLIVAVVNNIQQ-TWMMEANP--EEESNGGAVGEETVILEEAARPARRRGVAEWAMERLRKEKLEENENGEELGDCSICLD
        A +I SY   MAGG+RE +F  V  ++ I+  TWM E +   +  SNG A GEETVILEE ARP                EK+E  ENGEE+GDCSICL+
Subjt:  ARQIASYVFGMAGGDREMNFLIVAVVNNIQQ-TWMMEANP--EEESNGGAVGEETVILEEAARPARRRGVAEWAMERLRKEKLEENENGEELGDCSICLD

Query:  EMNCN
        E+N N
Subjt:  EMNCN

XP_023539471.1 uncharacterized protein LOC111800118 [Cucurbita pepo subsp. pepo]9.4e-3145.21Show/hide
Query:  EQPYQVLQLRLRYVHRLIAGSPSVGVPYRILHETAPAPLDDLLFPLPLRELPDPVFFQIYVEELLSSVGIRAAAREVMARQIASYVFGMAGGDREMNFLI
        + P Q+LQ+R+R+  RL+ GSP  G P+ I+HET P  + D  FPLPLREL DP+F Q Y+EE LSS  + A  +  +AR+IAS+V  MA G+ EM F I
Subjt:  EQPYQVLQLRLRYVHRLIAGSPSVGVPYRILHETAPAPLDDLLFPLPLRELPDPVFFQIYVEELLSSVGIRAAAREVMARQIASYVFGMAGGDREMNFLI

Query:  VAVVNNIQQTWM-----------MEANPEEESNGGAVGEETVILEEAARPARRRGVAEWAMERLRKEKLEENENGEELGDCSICLDEM
        VA ++ IQ  W+            E   EEE       EE VI +     + RRG  E A+ERL+KEK  +   GE+LG+CS+C DEM
Subjt:  VAVVNNIQQTWM-----------MEANPEEESNGGAVGEETVILEEAARPARRRGVAEWAMERLRKEKLEENENGEELGDCSICLDEM

TrEMBL top hitse value%identityAlignment
A0A0A0K2W2 RING-type domain-containing protein6.0e-3144.78Show/hide
Query:  MSFATSRPIQYRLYGDSNAASGEQPYQVLQLRLRYVHRLIAGSPSVGVPYRILHETAPAPLDDLLFPLPLRELPDPVFFQIYVEELLSSVGIRAAAREVM
        MSFA S PIQYRLY      +G     VLQ+ + ++ ++I+ SP  G P+ +LH+T   P  + LF L LR+L  P+F   Y+ ++LSS+ IR AA + M
Subjt:  MSFATSRPIQYRLYGDSNAASGEQPYQVLQLRLRYVHRLIAGSPSVGVPYRILHETAPAPLDDLLFPLPLRELPDPVFFQIYVEELLSSVGIRAAAREVM

Query:  ARQIASYVFGMAGGDREMNFLIVAVVNNIQQTWMMEANPEEESNGGAVGEETVILEEAARPARRRGVAEWAMERLRKEKLEENENGEELGDCSICLDEMN
        AR+IAS++  M   + E NF I+A V+ I+  W+          GGA  EETV+L+EA  PA +RGV     ERLR E     E  EELGDCSICLDE++
Subjt:  ARQIASYVFGMAGGDREMNFLIVAVVNNIQQTWMMEANPEEESNGGAVGEETVILEEAARPARRRGVAEWAMERLRKEKLEENENGEELGDCSICLDEMN

Query:  C
        C
Subjt:  C

A0A0A0K696 RING-type domain-containing protein6.0e-3144.78Show/hide
Query:  MSFATSRPIQYRLYGDSNAASGEQPYQVLQLRLRYVHRLIAGSPSVGVPYRILHETAPAPLDDLLFPLPLRELPDPVFFQIYVEELLSSVGIRAAAREVM
        MSFA S PIQYRLY      +G     VLQ+ + ++ ++I+ SP  G P+ +LH+T   P  + LF L LR+L  P+F   Y+ ++LSS+ IR AA + M
Subjt:  MSFATSRPIQYRLYGDSNAASGEQPYQVLQLRLRYVHRLIAGSPSVGVPYRILHETAPAPLDDLLFPLPLRELPDPVFFQIYVEELLSSVGIRAAAREVM

Query:  ARQIASYVFGMAGGDREMNFLIVAVVNNIQQTWMMEANPEEESNGGAVGEETVILEEAARPARRRGVAEWAMERLRKEKLEENENGEELGDCSICLDEMN
        AR+IAS++  M   + E NF I+A V+ I+  W+          GGA  EETV+L+EA  PA +RGV     ERLR E     E  EELGDCSICLDE++
Subjt:  ARQIASYVFGMAGGDREMNFLIVAVVNNIQQTWMMEANPEEESNGGAVGEETVILEEAARPARRRGVAEWAMERLRKEKLEENENGEELGDCSICLDEMN

Query:  C
        C
Subjt:  C

A0A1S4DUZ4 E3 ubiquitin-protein ligase RNF181-like2.3e-3043.28Show/hide
Query:  MSFATSRPIQYRLYGDSNAASGEQPYQVLQLRLRYVHRLIAGSPSVGVPYRILHETAPAPLDDLLFPLPLRELPDPVFFQIYVEELLSSVGIRAAAREVM
        MSFA S PIQYRLYG     +G     +L++R+ +  ++I+ SP  G P++ILH+T   P  + L  L LR+L  P+F   Y+ + LSS+ IR AA + M
Subjt:  MSFATSRPIQYRLYGDSNAASGEQPYQVLQLRLRYVHRLIAGSPSVGVPYRILHETAPAPLDDLLFPLPLRELPDPVFFQIYVEELLSSVGIRAAAREVM

Query:  ARQIASYVFGMAGGDREMNFLIVAVVNNIQQTWMMEANPEEESNGGAVGEETVILEEAARPARRRGVAEWAMERLRKEKLEENENGEELGDCSICLDEMN
        ARQIAS++  M   + + NF I+A V+ I+  W+      EE + GA  EETV+ +EA  PA +RGV      + R E+L+  E  E+LGDCSICLDE++
Subjt:  ARQIASYVFGMAGGDREMNFLIVAVVNNIQQTWMMEANPEEESNGGAVGEETVILEEAARPARRRGVAEWAMERLRKEKLEENENGEELGDCSICLDEMN

Query:  C
        C
Subjt:  C

A0A5D3E1S5 E3 ubiquitin-protein ligase RNF181-like protein2.3e-3043.28Show/hide
Query:  MSFATSRPIQYRLYGDSNAASGEQPYQVLQLRLRYVHRLIAGSPSVGVPYRILHETAPAPLDDLLFPLPLRELPDPVFFQIYVEELLSSVGIRAAAREVM
        MSFA S PIQYRLYG     +G     +L++R+ +  ++I+ SP  G P++ILH+T   P  + L  L LR+L  P+F   Y+ + LSS+ IR AA + M
Subjt:  MSFATSRPIQYRLYGDSNAASGEQPYQVLQLRLRYVHRLIAGSPSVGVPYRILHETAPAPLDDLLFPLPLRELPDPVFFQIYVEELLSSVGIRAAAREVM

Query:  ARQIASYVFGMAGGDREMNFLIVAVVNNIQQTWMMEANPEEESNGGAVGEETVILEEAARPARRRGVAEWAMERLRKEKLEENENGEELGDCSICLDEMN
        ARQIAS++  M   + + NF I+A V+ I+  W+      EE + GA  EETV+ +EA  PA +RGV      + R E+L+  E  E+LGDCSICLDE++
Subjt:  ARQIASYVFGMAGGDREMNFLIVAVVNNIQQTWMMEANPEEESNGGAVGEETVILEEAARPARRRGVAEWAMERLRKEKLEENENGEELGDCSICLDEMN

Query:  C
        C
Subjt:  C

A0A6J1FXN0 RING-H2 finger protein ATL16-like1.6e-2341.26Show/hide
Query:  MSFATSRPIQYRLYGDSNAASGEQPYQVLQLRLRYVHRLIAGSPSVGVPYRILHETAPAPLDDLLFPLP--LRELPDPVFFQIYVEELLSSVGIRAAARE
        MS ATS PIQ+ L+ D +    EQ    L++++R   RLI+G  +     +I+ ETAP PL + LFPLP   R + DPVF QIY+ ++L S+ I A A E
Subjt:  MSFATSRPIQYRLYGDSNAASGEQPYQVLQLRLRYVHRLIAGSPSVGVPYRILHETAPAPLDDLLFPLP--LRELPDPVFFQIYVEELLSSVGIRAAARE

Query:  VMARQIASYVFGMAGGDREMNFLIVAVVNNIQQT--WMMEANPEEESNGGAVGEETVILEEAARPARRRGVAEWAMERLRKEKLE-ENENGEELGDCSIC
        V++ QIAS+   +A    + N  +VAVV+N+ ++  W ++A P  +    AV    V+ E AA           A  R R EK+E E E  E+LG+CSIC
Subjt:  VMARQIASYVFGMAGGDREMNFLIVAVVNNIQQT--WMMEANPEEESNGGAVGEETVILEEAARPARRRGVAEWAMERLRKEKLE-ENENGEELGDCSIC

Query:  LDEMNC
        LDEM C
Subjt:  LDEMNC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTTCGCTACTTCCAGACCGATCCAATATCGTCTTTACGGCGACAGCAACGCCGCTTCCGGCGAGCAACCCTATCAAGTTCTGCAACTCCGATTGCGCTACGTCCA
CCGTCTGATCGCTGGATCCCCGTCCGTCGGAGTTCCGTACCGAATCCTCCATGAAACTGCGCCGGCTCCACTAGACGATCTTCTGTTCCCGCTCCCTCTGCGCGAACTCC
CTGACCCGGTGTTCTTTCAGATCTACGTGGAGGAGTTGCTGTCCAGCGTCGGCATCCGCGCCGCCGCTCGCGAAGTCATGGCCCGGCAGATCGCGTCGTACGTGTTCGGA
ATGGCGGGCGGAGACAGAGAGATGAACTTCCTCATCGTGGCGGTGGTGAATAACATCCAACAGACGTGGATGATGGAGGCAAACCCGGAGGAAGAGAGCAATGGCGGTGC
AGTGGGGGAGGAGACGGTGATTCTGGAAGAAGCTGCTAGGCCGGCGAGGAGGAGGGGAGTGGCGGAGTGGGCGATGGAGAGGCTGAGGAAGGAGAAATTGGAAGAGAATG
AGAATGGAGAAGAATTGGGAGATTGCAGTATCTGTTTGGATGAAATGAATTGCAATTGCAAGAAGAAGGAGTCCAACCATCAAACAGAAAATCCTCTCGTGCCATTGAGA
GAGCAGGACCCTTTGTTCAAGACTCGGAGTGACCATTTAAGGGAACACTCATCTGCTTCCCTGAAGTCGGGAAGGAGTGAATTCCATCTTGTACGATTATGTTCCCAGCT
CCCCACTCGGTCTTGTCCCCAAAATGGTAGGCTTATTGAGTCGATGTATTGGAATAATATTGCAGCAATCAGCAATCAAATATCAGATATCAATCCAGACCAACTTAATG
CATCCATAGCTTCTTCCATTACGGAAAGAGAAAGATTAAACCTAAAGCGCCAAAGTTCGAGCAGGTCTCAAGTGCGACGGCATTGGCTGGGCGGTTCACAACTTGGCATG
GAAAGAATTAGTAGAAGATGGAGCATTAAATTGCTAGAAGCAAAAGCGATCCTTCAAGGCCTTAAGAATATCAGATCTACCTGTATTCAAAACAAAGGTTCATTTGAAGG
GGAATCAAATGCGGCTGAAGTCATTCACGCCATCATTGGCTCCTCCGTCAATCTCACCGAGCTGAAGAATGTTGTGGAAGTCATGGCCACGACGTCTCAAGGTAATTCTT
TGGTGTTCTTCGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTTCGCTACTTCCAGACCGATCCAATATCGTCTTTACGGCGACAGCAACGCCGCTTCCGGCGAGCAACCCTATCAAGTTCTGCAACTCCGATTGCGCTACGTCCA
CCGTCTGATCGCTGGATCCCCGTCCGTCGGAGTTCCGTACCGAATCCTCCATGAAACTGCGCCGGCTCCACTAGACGATCTTCTGTTCCCGCTCCCTCTGCGCGAACTCC
CTGACCCGGTGTTCTTTCAGATCTACGTGGAGGAGTTGCTGTCCAGCGTCGGCATCCGCGCCGCCGCTCGCGAAGTCATGGCCCGGCAGATCGCGTCGTACGTGTTCGGA
ATGGCGGGCGGAGACAGAGAGATGAACTTCCTCATCGTGGCGGTGGTGAATAACATCCAACAGACGTGGATGATGGAGGCAAACCCGGAGGAAGAGAGCAATGGCGGTGC
AGTGGGGGAGGAGACGGTGATTCTGGAAGAAGCTGCTAGGCCGGCGAGGAGGAGGGGAGTGGCGGAGTGGGCGATGGAGAGGCTGAGGAAGGAGAAATTGGAAGAGAATG
AGAATGGAGAAGAATTGGGAGATTGCAGTATCTGTTTGGATGAAATGAATTGCAATTGCAAGAAGAAGGAGTCCAACCATCAAACAGAAAATCCTCTCGTGCCATTGAGA
GAGCAGGACCCTTTGTTCAAGACTCGGAGTGACCATTTAAGGGAACACTCATCTGCTTCCCTGAAGTCGGGAAGGAGTGAATTCCATCTTGTACGATTATGTTCCCAGCT
CCCCACTCGGTCTTGTCCCCAAAATGGTAGGCTTATTGAGTCGATGTATTGGAATAATATTGCAGCAATCAGCAATCAAATATCAGATATCAATCCAGACCAACTTAATG
CATCCATAGCTTCTTCCATTACGGAAAGAGAAAGATTAAACCTAAAGCGCCAAAGTTCGAGCAGGTCTCAAGTGCGACGGCATTGGCTGGGCGGTTCACAACTTGGCATG
GAAAGAATTAGTAGAAGATGGAGCATTAAATTGCTAGAAGCAAAAGCGATCCTTCAAGGCCTTAAGAATATCAGATCTACCTGTATTCAAAACAAAGGTTCATTTGAAGG
GGAATCAAATGCGGCTGAAGTCATTCACGCCATCATTGGCTCCTCCGTCAATCTCACCGAGCTGAAGAATGTTGTGGAAGTCATGGCCACGACGTCTCAAGGTAATTCTT
TGGTGTTCTTCGAATAA
Protein sequenceShow/hide protein sequence
MSFATSRPIQYRLYGDSNAASGEQPYQVLQLRLRYVHRLIAGSPSVGVPYRILHETAPAPLDDLLFPLPLRELPDPVFFQIYVEELLSSVGIRAAAREVMARQIASYVFG
MAGGDREMNFLIVAVVNNIQQTWMMEANPEEESNGGAVGEETVILEEAARPARRRGVAEWAMERLRKEKLEENENGEELGDCSICLDEMNCNCKKKESNHQTENPLVPLR
EQDPLFKTRSDHLREHSSASLKSGRSEFHLVRLCSQLPTRSCPQNGRLIESMYWNNIAAISNQISDINPDQLNASIASSITERERLNLKRQSSSRSQVRRHWLGGSQLGM
ERISRRWSIKLLEAKAILQGLKNIRSTCIQNKGSFEGESNAAEVIHAIIGSSVNLTELKNVVEVMATTSQGNSLVFFE