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Spg020100 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020100
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionE3 ubiquitin-protein ligase RNF181-like
Genome locationscaffold1:27739060..27739749
RNA-Seq ExpressionSpg020100
SyntenySpg020100
Gene Ontology termsGO:0044267 - cellular protein metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595648.1 hypothetical protein SDJN03_12201, partial [Cucurbita argyrosperma subsp. sororia]2.1e-4048.17Show/hide
Query:  TSSSIHYRLYSVARPASADQSHQVLELRLRYIRRPLISAPPAGI--LHETPPPRLKKALFHLSLRQLQDPL---SYVKRWLSSLNIRSAACEVIARHIAS
        TS  I YR+Y     AS +Q +QVL+L+LRY RR +  +P +G+  L ET P  L+  LF L L++L DP+    YV + LS LN+RS   EVIA  I S
Subjt:  TSSSIHYRLYSVARPASADQSHQVLELRLRYIRRPLISAPPAGI--LHETPPPRLKKALFHLSLRQLQDPL---SYVKRWLSSLNIRSAACEVIARHIAS

Query:  YIMQTAGGNRDTNFHIVAEIDHIRLITSMEDEDPIPGLYSTGGAPVEEKAVSEEAPPESVRKEKLEENENGEELGDCSICLDEMNCN-------CKKKEV
        Y +  AGGNR+T+FH V E+D+IR+IT ME+   +   +S   A  EE A+ EEA P +   EK+E  ENGEE+GDCSICL+E+N N        K++EV
Subjt:  YIMQTAGGNRDTNFHIVAEIDHIRLITSMEDEDPIPGLYSTGGAPVEEKAVSEEAPPESVRKEKLEENENGEELGDCSICLDEMNCN-------CKKKEV

Query:  IKIPCGHAYHHSCISKWL
        I++ CGH YH SCI  WL
Subjt:  IKIPCGHAYHHSCISKWL

KAG6595650.1 hypothetical protein SDJN03_12203, partial [Cucurbita argyrosperma subsp. sororia]9.6e-4148.62Show/hide
Query:  TSSSIHYRLYSVARPASADQSHQVLELRLRYIRRPLISAPPAGI--LHETPPPRLKKALFHLSLRQLQDPL---SYVKRWLSSLNIRSAACEVIARHIAS
        TS  I YR+Y     AS +Q +QVL+L+LRY RR +  +P +G+  L ET P  L+  LF L L++L DP+    YV + LS LN+RS   EVIA  I S
Subjt:  TSSSIHYRLYSVARPASADQSHQVLELRLRYIRRPLISAPPAGI--LHETPPPRLKKALFHLSLRQLQDPL---SYVKRWLSSLNIRSAACEVIARHIAS

Query:  YIMQTAGGNRDTNFHIVAEIDHIRLITSMEDEDPIPGLYSTGGAPVEEKAVSEEAPPESVRKEKLEENENGEELGDCSICLDEMNCN-------CKKKEV
        Y +  AGGNR+T+FH V E+D+IRLIT ME+   +   +S   A  EE A+ EEA P +   EK+E  ENGEE+GDCSICL+E+N N        K++EV
Subjt:  YIMQTAGGNRDTNFHIVAEIDHIRLITSMEDEDPIPGLYSTGGAPVEEKAVSEEAPPESVRKEKLEENENGEELGDCSICLDEMNCN-------CKKKEV

Query:  IKIPCGHAYHHSCISKWL
        I++ CGH YH SCI  WL
Subjt:  IKIPCGHAYHHSCISKWL

XP_004144954.1 uncharacterized protein LOC101214496 [Cucumis sativus]5.3e-3948.15Show/hide
Query:  SSSIHYRLYSVARPASADQSHQVLELRLRYIRRPLISAP----PAGILHETPPPRLKKALFHLSLRQLQDPLSYVKRWLSSLNIRSAACEVIARHIASYI
        S+ I YRLY     AS    + VL++ + +I++ +  +P    P  +LH+TP      ALF+LSLRQLQ PL Y+ + LSSLNIR AA + +AR IAS+I
Subjt:  SSSIHYRLYSVARPASADQSHQVLELRLRYIRRPLISAP----PAGILHETPPPRLKKALFHLSLRQLQDPLSYVKRWLSSLNIRSAACEVIARHIASYI

Query:  MQTAGGNRDTNFHIVAEIDHIRLITSMEDEDPIPGLYSTGGAPVEEKAVSEEAPPE------SVRKEKLEENENGEELGDCSICLDEMNCNCKKKEVIKI
        +Q    N +TNFHI+AE+D IRLI        +P +   GGA  EE  V +EAPP         R E+L   E  EELGDCSICLDE+  +C+K+EV++I
Subjt:  MQTAGGNRDTNFHIVAEIDHIRLITSMEDEDPIPGLYSTGGAPVEEKAVSEEAPPE------SVRKEKLEENENGEELGDCSICLDEMNCNCKKKEVIKI

Query:  PCGHAYHHSCISKWLE
        PCGH YH SCI KWLE
Subjt:  PCGHAYHHSCISKWLE

XP_011659694.1 E3 ubiquitin-protein ligase RDUF1 [Cucumis sativus]5.3e-3948.15Show/hide
Query:  SSSIHYRLYSVARPASADQSHQVLELRLRYIRRPLISAP----PAGILHETPPPRLKKALFHLSLRQLQDPLSYVKRWLSSLNIRSAACEVIARHIASYI
        S+ I YRLY     AS    + VL++ + +I++ +  +P    P  +LH+TP      ALF+LSLRQLQ PL Y+ + LSSLNIR AA + +AR IAS+I
Subjt:  SSSIHYRLYSVARPASADQSHQVLELRLRYIRRPLISAP----PAGILHETPPPRLKKALFHLSLRQLQDPLSYVKRWLSSLNIRSAACEVIARHIASYI

Query:  MQTAGGNRDTNFHIVAEIDHIRLITSMEDEDPIPGLYSTGGAPVEEKAVSEEAPPE------SVRKEKLEENENGEELGDCSICLDEMNCNCKKKEVIKI
        +Q    N +TNFHI+AE+D IRLI        +P +   GGA  EE  V +EAPP         R E+L   E  EELGDCSICLDE+  +C+K+EV++I
Subjt:  MQTAGGNRDTNFHIVAEIDHIRLITSMEDEDPIPGLYSTGGAPVEEKAVSEEAPPE------SVRKEKLEENENGEELGDCSICLDEMNCNCKKKEVIKI

Query:  PCGHAYHHSCISKWLE
        PCGH YH SCI KWLE
Subjt:  PCGHAYHHSCISKWLE

XP_023518048.1 uncharacterized protein LOC111781594 [Cucurbita pepo subsp. pepo]8.7e-4249.07Show/hide
Query:  TSSSIHYRLYSVARPASADQSHQVLELRLRYIRRPLISAPPAGI--LHETPPPRLKKALFHLSLRQLQDPL---SYVKRWLSSLNIRSAACEVIARHIAS
        TS  I YR+Y     AS +Q +QVL+L+L YIRR +  +P +G+  L ET P  L+  LF L L++L DP+    YV + LS LN+RS ACE IA  I S
Subjt:  TSSSIHYRLYSVARPASADQSHQVLELRLRYIRRPLISAPPAGI--LHETPPPRLKKALFHLSLRQLQDPL---SYVKRWLSSLNIRSAACEVIARHIAS

Query:  YIMQTAGGNRDTNFHIVAEIDHIRLITSMEDEDPIPGLYSTGGAPVEEKAVSEEAPPESVRKEKLEENENGEELGDCSICLDEMNCN-----CKKKEVIK
        Y +  AGGNR+T+FH V ++D IRLIT ME+   +   +S G A  EE  + EEA P +   EK+E  ENGEE+GDCSICL+E+N N      K++EVI+
Subjt:  YIMQTAGGNRDTNFHIVAEIDHIRLITSMEDEDPIPGLYSTGGAPVEEKAVSEEAPPESVRKEKLEENENGEELGDCSICLDEMNCN-----CKKKEVIK

Query:  IPCGHAYHHSCISKWL
        + CGH YH SCI  WL
Subjt:  IPCGHAYHHSCISKWL

TrEMBL top hitse value%identityAlignment
A0A0A0K2W2 RING-type domain-containing protein2.6e-3948.15Show/hide
Query:  SSSIHYRLYSVARPASADQSHQVLELRLRYIRRPLISAP----PAGILHETPPPRLKKALFHLSLRQLQDPLSYVKRWLSSLNIRSAACEVIARHIASYI
        S+ I YRLY     AS    + VL++ + +I++ +  +P    P  +LH+TP      ALF+LSLRQLQ PL Y+ + LSSLNIR AA + +AR IAS+I
Subjt:  SSSIHYRLYSVARPASADQSHQVLELRLRYIRRPLISAP----PAGILHETPPPRLKKALFHLSLRQLQDPLSYVKRWLSSLNIRSAACEVIARHIASYI

Query:  MQTAGGNRDTNFHIVAEIDHIRLITSMEDEDPIPGLYSTGGAPVEEKAVSEEAPPE------SVRKEKLEENENGEELGDCSICLDEMNCNCKKKEVIKI
        +Q    N +TNFHI+AE+D IRLI        +P +   GGA  EE  V +EAPP         R E+L   E  EELGDCSICLDE+  +C+K+EV++I
Subjt:  MQTAGGNRDTNFHIVAEIDHIRLITSMEDEDPIPGLYSTGGAPVEEKAVSEEAPPE------SVRKEKLEENENGEELGDCSICLDEMNCNCKKKEVIKI

Query:  PCGHAYHHSCISKWLE
        PCGH YH SCI KWLE
Subjt:  PCGHAYHHSCISKWLE

A0A0A0K696 RING-type domain-containing protein2.6e-3948.15Show/hide
Query:  SSSIHYRLYSVARPASADQSHQVLELRLRYIRRPLISAP----PAGILHETPPPRLKKALFHLSLRQLQDPLSYVKRWLSSLNIRSAACEVIARHIASYI
        S+ I YRLY     AS    + VL++ + +I++ +  +P    P  +LH+TP      ALF+LSLRQLQ PL Y+ + LSSLNIR AA + +AR IAS+I
Subjt:  SSSIHYRLYSVARPASADQSHQVLELRLRYIRRPLISAP----PAGILHETPPPRLKKALFHLSLRQLQDPLSYVKRWLSSLNIRSAACEVIARHIASYI

Query:  MQTAGGNRDTNFHIVAEIDHIRLITSMEDEDPIPGLYSTGGAPVEEKAVSEEAPPE------SVRKEKLEENENGEELGDCSICLDEMNCNCKKKEVIKI
        +Q    N +TNFHI+AE+D IRLI        +P +   GGA  EE  V +EAPP         R E+L   E  EELGDCSICLDE+  +C+K+EV++I
Subjt:  MQTAGGNRDTNFHIVAEIDHIRLITSMEDEDPIPGLYSTGGAPVEEKAVSEEAPPE------SVRKEKLEENENGEELGDCSICLDEMNCNCKKKEVIKI

Query:  PCGHAYHHSCISKWLE
        PCGH YH SCI KWLE
Subjt:  PCGHAYHHSCISKWLE

A0A1S4DUZ4 E3 ubiquitin-protein ligase RNF181-like8.2e-3845.83Show/hide
Query:  SSSIHYRLYSVARPASADQSHQVLELRLRYIRRPLISAPPAG----ILHETPPPRLKKALFHLSLRQLQDPLSYVKRWLSSLNIRSAACEVIARHIASYI
        S+ I YRLY      S    + +LE+R+ +  + +  +P  G    ILH+TP      AL +L+LRQLQ PL Y+ ++LSSLNIR AA + +AR IAS+I
Subjt:  SSSIHYRLYSVARPASADQSHQVLELRLRYIRRPLISAPPAG----ILHETPPPRLKKALFHLSLRQLQDPLSYVKRWLSSLNIRSAACEVIARHIASYI

Query:  MQTAGGNRDTNFHIVAEIDHIRLITSMEDEDPIPGLYSTGGAPVEEKAVSEEAPPE------SVRKEKLEENENGEELGDCSICLDEMNCNCKKKEVIKI
        +Q    N D NFHI+AE+D IR+I    +E  +       GA  EE  V +EAPP         R E+L+  E  E+LGDCSICLDE+  +C+K+EVI+I
Subjt:  MQTAGGNRDTNFHIVAEIDHIRLITSMEDEDPIPGLYSTGGAPVEEKAVSEEAPPE------SVRKEKLEENENGEELGDCSICLDEMNCNCKKKEVIKI

Query:  PCGHAYHHSCISKWLE
        PCGH YH SCI KWL+
Subjt:  PCGHAYHHSCISKWLE

A0A5D3E1S5 E3 ubiquitin-protein ligase RNF181-like protein8.2e-3845.83Show/hide
Query:  SSSIHYRLYSVARPASADQSHQVLELRLRYIRRPLISAPPAG----ILHETPPPRLKKALFHLSLRQLQDPLSYVKRWLSSLNIRSAACEVIARHIASYI
        S+ I YRLY      S    + +LE+R+ +  + +  +P  G    ILH+TP      AL +L+LRQLQ PL Y+ ++LSSLNIR AA + +AR IAS+I
Subjt:  SSSIHYRLYSVARPASADQSHQVLELRLRYIRRPLISAPPAG----ILHETPPPRLKKALFHLSLRQLQDPLSYVKRWLSSLNIRSAACEVIARHIASYI

Query:  MQTAGGNRDTNFHIVAEIDHIRLITSMEDEDPIPGLYSTGGAPVEEKAVSEEAPPE------SVRKEKLEENENGEELGDCSICLDEMNCNCKKKEVIKI
        +Q    N D NFHI+AE+D IR+I    +E  +       GA  EE  V +EAPP         R E+L+  E  E+LGDCSICLDE+  +C+K+EVI+I
Subjt:  MQTAGGNRDTNFHIVAEIDHIRLITSMEDEDPIPGLYSTGGAPVEEKAVSEEAPPE------SVRKEKLEENENGEELGDCSICLDEMNCNCKKKEVIKI

Query:  PCGHAYHHSCISKWLE
        PCGH YH SCI KWL+
Subjt:  PCGHAYHHSCISKWLE

A0A6J1EKL4 E3 ubiquitin-protein ligase arkadia-like1.3e-3050.3Show/hide
Query:  PAGILHETPPPRLKKALFHLSLRQLQDPLSYVKRWLSSLNIRSAACEVIARHIASYIMQTAGGNRDTNFHIVAEIDHIRLITSMEDEDPIPGLYSTGGAP
        P  IL ET P  +  ALFHLSLRQL DPL ++ R LS+L+I +AACEVI   IAS I Q + GNR+T+FHIV E+D I+ I   +      G    GG  
Subjt:  PAGILHETPPPRLKKALFHLSLRQLQDPLSYVKRWLSSLNIRSAACEVIARHIASYIMQTAGGNRDTNFHIVAEIDHIRLITSMEDEDPIPGLYSTGGAP

Query:  VEEKAVSEEAPPESVRKEKL---EENENGEELGDCSICLDEMNCNCKKKEVIKIPCGHAYHHSCISKWL
        VEE  V +E P    ++  +    E E  +ELGDC ICLDEM    KK+EVI+ PCGH YH SCI +WL
Subjt:  VEEKAVSEEAPPESVRKEKL---EENENGEELGDCSICLDEMNCNCKKKEVIKIPCGHAYHHSCISKWL

SwissProt top hitse value%identityAlignment
Q9Y7K6 Uncharacterized RING finger protein C2A9.04c5.7e-0450Show/hide
Query:  CSICLDEMNCNCKKKEVIKIPCGHAYHHSCISKWLE
        C IC D+MN N  +K+  K+PCGH +  +C+ KWLE
Subjt:  CSICLDEMNCNCKKKEVIKIPCGHAYHHSCISKWLE

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTACTTCTTCGTCCATTCATTATCGTCTTTACAGTGTCGCCAGACCCGCTTCCGCCGATCAATCGCATCAAGTTCTCGAACTACGATTGCGTTACATCCGCCGTCC
TCTGATCTCTGCTCCTCCGGCCGGAATCCTCCATGAAACACCACCGCCTCGACTGAAAAAGGCGCTCTTCCATCTCTCTCTGCGACAACTTCAAGATCCGCTCTCCTACG
TCAAGCGCTGGCTCTCCTCACTCAACATCCGCTCCGCTGCTTGCGAAGTCATCGCTCGGCATATCGCCTCCTACATCATGCAAACAGCCGGCGGAAATAGAGACACGAAC
TTCCACATCGTCGCCGAGATCGATCACATCCGACTGATCACCTCGATGGAGGATGAGGATCCAATCCCCGGACTCTACAGTACTGGCGGTGCACCGGTGGAGGAGAAGGC
TGTTTCCGAAGAAGCTCCGCCTGAGAGCGTGAGGAAGGAGAAATTGGAAGAGAATGAGAATGGAGAAGAATTGGGAGATTGCAGTATCTGTTTGGATGAAATGAATTGCA
ATTGCAAAAAGAAGGAGGTGATAAAGATCCCCTGCGGCCATGCCTATCATCATTCATGCATCTCCAAATGGTTAGAAGGCATTGCCATTGGAGGACTCAGAGCGACATTA
TTCATTTTTTCGGGGGTTCTTTTGCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTACTTCTTCGTCCATTCATTATCGTCTTTACAGTGTCGCCAGACCCGCTTCCGCCGATCAATCGCATCAAGTTCTCGAACTACGATTGCGTTACATCCGCCGTCC
TCTGATCTCTGCTCCTCCGGCCGGAATCCTCCATGAAACACCACCGCCTCGACTGAAAAAGGCGCTCTTCCATCTCTCTCTGCGACAACTTCAAGATCCGCTCTCCTACG
TCAAGCGCTGGCTCTCCTCACTCAACATCCGCTCCGCTGCTTGCGAAGTCATCGCTCGGCATATCGCCTCCTACATCATGCAAACAGCCGGCGGAAATAGAGACACGAAC
TTCCACATCGTCGCCGAGATCGATCACATCCGACTGATCACCTCGATGGAGGATGAGGATCCAATCCCCGGACTCTACAGTACTGGCGGTGCACCGGTGGAGGAGAAGGC
TGTTTCCGAAGAAGCTCCGCCTGAGAGCGTGAGGAAGGAGAAATTGGAAGAGAATGAGAATGGAGAAGAATTGGGAGATTGCAGTATCTGTTTGGATGAAATGAATTGCA
ATTGCAAAAAGAAGGAGGTGATAAAGATCCCCTGCGGCCATGCCTATCATCATTCATGCATCTCCAAATGGTTAGAAGGCATTGCCATTGGAGGACTCAGAGCGACATTA
TTCATTTTTTCGGGGGTTCTTTTGCAATAA
Protein sequenceShow/hide protein sequence
MSTSSSIHYRLYSVARPASADQSHQVLELRLRYIRRPLISAPPAGILHETPPPRLKKALFHLSLRQLQDPLSYVKRWLSSLNIRSAACEVIARHIASYIMQTAGGNRDTN
FHIVAEIDHIRLITSMEDEDPIPGLYSTGGAPVEEKAVSEEAPPESVRKEKLEENENGEELGDCSICLDEMNCNCKKKEVIKIPCGHAYHHSCISKWLEGIAIGGLRATL
FIFSGVLLQ