; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg020106 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020106
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionexosome complex component RRP43
Genome locationscaffold1:22807275..22811220
RNA-Seq ExpressionSpg020106
SyntenySpg020106
Gene Ontology termsNA
InterPro domainsIPR001247 - Exoribonuclease, phosphorolytic domain 1
IPR020568 - Ribosomal protein S5 domain 2-type fold
IPR027408 - PNPase/RNase PH domain superfamily
IPR036345 - Exoribonuclease, PH domain 2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7033523.1 Exosome complex component RRP43 [Cucurbita argyrosperma subsp. argyrosperma]1.1e-15081.67Show/hide
Query:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLS EMEVDAFRRLFPIQFFERHLAESIRPDGR LGKARDTTIALGPVSSANGSALAK+GSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
Subjt:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHCKQRDVADKFVGFTHRGEGETIL
        PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSH                       
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHCKQRDVADKFVGFTHRGEGETIL

Query:  SSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESV
                                         LQIPVVALNDDGKVVFVSEEEGGENFEKE VNKE+RKLKLN +PFSLTCLLHKNYILADP AEEESV
Subjt:  SSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESV

Query:  METIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAISGMEID
        METIVTVVLDSSGQLVSFYKPGGS+LAYTSAVQDCVALTRQR KELQMILDEAISGMEID
Subjt:  METIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAISGMEID

XP_008460772.1 PREDICTED: exosome complex component RRP43 isoform X1 [Cucumis melo]2.6e-14980Show/hide
Query:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLS +MEVDAFRRLFPIQF+ERHLAESIRPDGR LGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPS+ESPDEGCIA+DFHM
Subjt:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHCKQRDVADKFVGFTHRGEGETIL
        PP+CSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSH                       
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHCKQRDVADKFVGFTHRGEGETIL

Query:  SSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESV
                                         LQIPVVALNDDG+VVFVSEEEGGENFEKEPVNKEKRKLKLN +PFSLTCLLHK YILADP AEEESV
Subjt:  SSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESV

Query:  METIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAISGMEID
        METIVTVVLDSSGQLVSFYKPGGS+LAYTSAVQDC+ALTRQR KELQ+ILDEAISGMEID
Subjt:  METIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAISGMEID

XP_022928740.1 exosome complex component RRP43 [Cucurbita moschata]1.8e-15081.67Show/hide
Query:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLS EMEVDAFRRLFPIQFFERHLAESIRPDGR LGKARDTTIALGPVSSANGSALAK+GSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
Subjt:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHCKQRDVADKFVGFTHRGEGETIL
        PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSH                       
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHCKQRDVADKFVGFTHRGEGETIL

Query:  SSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESV
                                         LQIP VALNDDGKVVFVSEEEGGENFEKE VNKEKRKLKLN +PFSLTCLLHKNYILADP AEEESV
Subjt:  SSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESV

Query:  METIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAISGMEID
        METIVTVVLDSSGQLVSFYKPGGS+LAYTSAVQDCVALTRQR KELQMILDEAISGMEID
Subjt:  METIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAISGMEID

XP_022967860.1 exosome complex component RRP43 [Cucurbita maxima]1.2e-14981.39Show/hide
Query:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLS EMEVDAFRRLFPIQFFERHLAESIRPDGR LGKARDTTIALGPVSSANGSALAK+GSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
Subjt:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHCKQRDVADKFVGFTHRGEGETIL
        P ICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSH                       
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHCKQRDVADKFVGFTHRGEGETIL

Query:  SSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESV
                                         LQIPVVALNDDGKVVFVSEE+GGENFEKE VNKEKRKLKLN +PFSLTCLLHKNYILADP AEEESV
Subjt:  SSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESV

Query:  METIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAISGMEID
        METIVTVVLDSSGQLVSFYKPGGS+LAYTSAVQDCVALTRQR KELQMILDEAISGMEID
Subjt:  METIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAISGMEID

XP_023544252.1 exosome complex component RRP43 [Cucurbita pepo subsp. pepo]4.7e-15181.94Show/hide
Query:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLS EMEVDAFRRLFPIQFFERHLAESIRPDGR LGKARDTTIALGPVSSANGSALAK+GSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
Subjt:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHCKQRDVADKFVGFTHRGEGETIL
        PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSH                       
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHCKQRDVADKFVGFTHRGEGETIL

Query:  SSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESV
                                         LQIPVVALNDDGKVVFVSEEEGGENFEKE VNKEKRKLKLN +PFSLTCLLHKNYILADP AEEESV
Subjt:  SSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESV

Query:  METIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAISGMEID
        METIVTVVLDSSGQLVSFYKPGGS+LAYTSAVQDCVALTRQR KELQMILDEAISGMEID
Subjt:  METIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAISGMEID

TrEMBL top hitse value%identityAlignment
A0A1S3CD66 exosome complex component RRP43 isoform X11.3e-14980Show/hide
Query:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLS +MEVDAFRRLFPIQF+ERHLAESIRPDGR LGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPS+ESPDEGCIA+DFHM
Subjt:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHCKQRDVADKFVGFTHRGEGETIL
        PP+CSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSH                       
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHCKQRDVADKFVGFTHRGEGETIL

Query:  SSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESV
                                         LQIPVVALNDDG+VVFVSEEEGGENFEKEPVNKEKRKLKLN +PFSLTCLLHK YILADP AEEESV
Subjt:  SSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESV

Query:  METIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAISGMEID
        METIVTVVLDSSGQLVSFYKPGGS+LAYTSAVQDC+ALTRQR KELQ+ILDEAISGMEID
Subjt:  METIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAISGMEID

A0A1S3CEE1 exosome complex component RRP43 isoform X21.3e-14980Show/hide
Query:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLS +MEVDAFRRLFPIQF+ERHLAESIRPDGR LGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPS+ESPDEGCIA+DFHM
Subjt:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHCKQRDVADKFVGFTHRGEGETIL
        PP+CSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSH                       
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHCKQRDVADKFVGFTHRGEGETIL

Query:  SSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESV
                                         LQIPVVALNDDG+VVFVSEEEGGENFEKEPVNKEKRKLKLN +PFSLTCLLHK YILADP AEEESV
Subjt:  SSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESV

Query:  METIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAISGMEID
        METIVTVVLDSSGQLVSFYKPGGS+LAYTSAVQDC+ALTRQR KELQ+ILDEAISGMEID
Subjt:  METIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAISGMEID

A0A6J1DFM7 exosome complex component RRP431.1e-14879.72Show/hide
Query:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLS EMEVDAFRRLFP+QF+ERH AESIRPDGR LGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIA+DFHM
Subjt:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHCKQRDVADKFVGFTHRGEGETIL
        PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSH                       
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHCKQRDVADKFVGFTHRGEGETIL

Query:  SSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESV
                                         LQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKL+ IPFSLTC+LHKN+ILADP AEEES+
Subjt:  SSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESV

Query:  METIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAISGMEID
        METIVTVVLD SGQLVSFYKPGGS+LA+TSAVQDCVALTRQR+KELQ+ILDEAISGMEID
Subjt:  METIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAISGMEID

A0A6J1ESF5 exosome complex component RRP438.7e-15181.67Show/hide
Query:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLS EMEVDAFRRLFPIQFFERHLAESIRPDGR LGKARDTTIALGPVSSANGSALAK+GSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
Subjt:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHCKQRDVADKFVGFTHRGEGETIL
        PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSH                       
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHCKQRDVADKFVGFTHRGEGETIL

Query:  SSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESV
                                         LQIP VALNDDGKVVFVSEEEGGENFEKE VNKEKRKLKLN +PFSLTCLLHKNYILADP AEEESV
Subjt:  SSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESV

Query:  METIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAISGMEID
        METIVTVVLDSSGQLVSFYKPGGS+LAYTSAVQDCVALTRQR KELQMILDEAISGMEID
Subjt:  METIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAISGMEID

A0A6J1HVL5 exosome complex component RRP435.6e-15081.39Show/hide
Query:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLS EMEVDAFRRLFPIQFFERHLAESIRPDGR LGKARDTTIALGPVSSANGSALAK+GSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
Subjt:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHCKQRDVADKFVGFTHRGEGETIL
        P ICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSH                       
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHCKQRDVADKFVGFTHRGEGETIL

Query:  SSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESV
                                         LQIPVVALNDDGKVVFVSEE+GGENFEKE VNKEKRKLKLN +PFSLTCLLHKNYILADP AEEESV
Subjt:  SSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESV

Query:  METIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAISGMEID
        METIVTVVLDSSGQLVSFYKPGGS+LAYTSAVQDCVALTRQR KELQMILDEAISGMEID
Subjt:  METIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAISGMEID

SwissProt top hitse value%identityAlignment
Q10205 Exosome complex component rrp436.4e-2636.05Show/hide
Query:  SGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPI
        SG   L      F+++ P Q+    L + +R DGR++ + R+  I    +S+ANGSA+ + G    +  IK E+  P   SP+EG I  +  + P+CS  
Subjt:  SGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPI

Query:  VRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHCK
         +PG P++ A V+S++L  T+  S +I+L+ L + + KAAW+ Y DI CL+ DGS FD A  +  AA    K
Subjt:  VRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHCK

Q2KHU3 Exosome complex component RRP438.9e-3628.91Show/hide
Query:  FRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV
        F+ + P++++ R L E+ RPDGR LG+ R TT+ +G + +A+GSAL K+G+TT++  IK E   P  ++PD+G +  +  + P+CS   R G P E A V
Subjt:  FRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV

Query:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHCKQRDVADKFVGFTHRGEGETILSSLLWPIKGKNNLELVSCN
         S+ ++D I +S +I   +L +  GK AW+ Y D+ CL+ DG++ DA   +  AA                                             
Subjt:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHCKQRDVADKFVGFTHRGEGETILSSLLWPIKGKNNLELVSCN

Query:  VLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFY
                    + +Q+P V +N++  +  V+ +      +K  +N     +  +F  F  T L      + DP  EEE +    +TVV+D  G+L   +
Subjt:  VLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFY

Query:  KPGGSILAYTSAVQDCVALTRQRLKELQMILDEAISGME
        KPGGS L   + +QDC++    R KE++ ++DE    M+
Subjt:  KPGGSILAYTSAVQDCVALTRQRLKELQMILDEAISGME

Q8TYC2 Exosome complex component Rrp421.2e-2426.69Show/hide
Query:  RPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLR
        R DGR   + R   +  G +S ANGSAL ++G+T ++  +K+EV  P  +SP+EG +AV+  + P+  P   PG P E A  +S+ +   I  S MIDL 
Subjt:  RPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLR

Query:  ELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHCKQRDVADKFVGFTHRGEGETILSSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIP
        EL + +G+  W+ ++DI+ LD DG+LFDA+++ + +A S                                                          ++P
Subjt:  ELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHCKQRDVADKFVGFTHRGEGETILSSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIP

Query:  VVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTS-AVQDCV
           + DD               E E + ++   L +N  P S+T      Y+L DP  EEE +M+T +TV +  SG++ +  K  G +  +    ++D +
Subjt:  VVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTS-AVQDCV

Query:  ALTRQRLKELQ
         L  ++ +E++
Subjt:  ALTRQRLKELQ

Q96B26 Exosome complex component RRP431.9e-3829.5Show/hide
Query:  FRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV
        F+ + P++++ R L E+ RPDGR LG+ R TT+ +G +S+A+GSAL K+G+TT++  +K E   PS ++PD+G +  +  +PP+CS   R G P E A V
Subjt:  FRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV

Query:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHCKQRDVADKFVGFTHRGEGETILSSLLWPIKGKNNLELVSCN
         S+ ++D I +S +I   +L +  GK  W+ Y D+ CLD DG++ DA   +  AA                                             
Subjt:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHCKQRDVADKFVGFTHRGEGETILSSLLWPIKGKNNLELVSCN

Query:  VLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFY
                    + +Q+P V +N++  +  V+ +      +K  +N     +  +F  F  T L      + DP  EEE +    +T+V+D  G+L   +
Subjt:  VLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFY

Query:  KPGGSILAYTSAVQDCVALTRQRLKELQMILDEAISGME
        KPGGS L   + +QDC++    R KE++ ++DE I  M+
Subjt:  KPGGSILAYTSAVQDCVALTRQRLKELQMILDEAISGME

Q9D753 Exosome complex component RRP433.9e-3138.41Show/hide
Query:  FRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV
        F+ + P++++ R L E+ RPDGR LG+ R TT+ +G +S+A+GSAL K+G+TT++  +K E   P +++PD G +  +  +PP+CS   R G P E A V
Subjt:  FRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV

Query:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHCKQRDV
         S+ ++D + +S +I   +L +  GK AW+ Y D+ CLD DG++ DA   +  AA  + +  +V
Subjt:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHCKQRDV

Arabidopsis top hitse value%identityAlignment
AT1G60080.1 3'-5'-exoribonuclease family protein5.3e-11662.81Show/hide
Query:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MG+P+AA  DLS EMEVDAFRR+FP++FFERHL+ES+RPDGR LGKARDT + LG VS+A+GSALAKIGSTTMLAAI+MEVMTPS +SPDEGCIA++FHM
Subjt:  MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHCKQRDVADKFVGFTHRGEGETIL
        PPICSP VRPGRPAEAAPVISK+LSDTI SSGMIDL+EL LV GKAAWM YLDIYCLDADG+LFDAALL+A AAFS+                       
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHCKQRDVADKFVGFTHRGEGETIL

Query:  SSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGEN---FEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEE
                                         LQIP+VALND+G++V V+ E+  +N    EKE VNKEKRKL L  IPFSLTC+LHKNYILADP  EE
Subjt:  SSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGEN---FEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEE

Query:  ESVMETIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAISGMEID
        ES+M+T+VTVVLDSS Q+VSFYK GG+ LAY+SA++ CV L R+R KEL+ IL E    M+ID
Subjt:  ESVMETIVTVVLDSSGQLVSFYKPGGSILAYTSAVQDCVALTRQRLKELQMILDEAISGMEID

AT3G07750.1 3'-5'-exoribonuclease family protein9.9e-1424.11Show/hide
Query:  FFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIV--RPGR--PAEAAPVISKQ
        F +  +A+ +R DGR     R   +  G +  ANGSA  +IG T ++A++K E+  PS   PD+G +AV     P   P    R G    +E A  + + 
Subjt:  FFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIV--RPGR--PAEAAPVISKQ

Query:  LSDTISSSGM-IDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHCKQRDVADKFVGFTHRGEGETILSSLLWPIKGKNNLELVSCNVLS
        L    S +G  I+L  L + +GK  W  Y+D   + +DG+L DA   +  AA +                                   N  +   NV +
Subjt:  LSDTISSSGM-IDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHCKQRDVADKFVGFTHRGEGETILSSLLWPIKGKNNLELVSCNVLS

Query:  SVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPG
         V                 +D+   + +S+E             E  +   + +P  +T      + + D  AEEES M + V++ ++ +G +    K  
Subjt:  SVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPG

Query:  GSILAYTSAVQDCVALTRQRLKELQMILDEAISGME
        GS L   S + D +++ +   + L   LD  IS  E
Subjt:  GSILAYTSAVQDCVALTRQRLKELQMILDEAISGME

AT3G07750.2 3'-5'-exoribonuclease family protein9.9e-1424.11Show/hide
Query:  FFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIV--RPGR--PAEAAPVISKQ
        F +  +A+ +R DGR     R   +  G +  ANGSA  +IG T ++A++K E+  PS   PD+G +AV     P   P    R G    +E A  + + 
Subjt:  FFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIV--RPGR--PAEAAPVISKQ

Query:  LSDTISSSGM-IDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHCKQRDVADKFVGFTHRGEGETILSSLLWPIKGKNNLELVSCNVLS
        L    S +G  I+L  L + +GK  W  Y+D   + +DG+L DA   +  AA +                                   N  +   NV +
Subjt:  LSDTISSSGM-IDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHCKQRDVADKFVGFTHRGEGETILSSLLWPIKGKNNLELVSCNVLS

Query:  SVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPG
         V                 +D+   + +S+E             E  +   + +P  +T      + + D  AEEES M + V++ ++ +G +    K  
Subjt:  SVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPG

Query:  GSILAYTSAVQDCVALTRQRLKELQMILDEAISGME
        GS L   S + D +++ +   + L   LD  IS  E
Subjt:  GSILAYTSAVQDCVALTRQRLKELQMILDEAISGME


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACTGCCAAATGCTGCTTCCGGGGACTTGTCGTTGGAAATGGAGGTTGATGCTTTTAGACGACTCTTCCCAATTCAGTTTTTTGAGCGCCATCTTGCTGAATCAAT
ACGTCCTGATGGAAGAACATTGGGAAAAGCTAGAGATACAACCATTGCTCTTGGACCAGTATCATCTGCGAATGGGTCAGCCCTGGCTAAGATTGGTTCTACGACAATGT
TGGCTGCCATTAAAATGGAAGTAATGACGCCTTCCATAGAGTCACCGGATGAGGGTTGTATAGCTGTTGACTTTCATATGCCTCCAATATGCTCTCCCATTGTTAGGCCT
GGGAGACCAGCTGAAGCAGCACCTGTGATTTCAAAGCAGTTGTCTGATACTATTTCAAGTTCTGGGATGATTGATTTGAGAGAATTATCTCTTGTTAAAGGAAAAGCTGC
TTGGATGGCATACCTGGATATTTATTGCTTGGATGCTGATGGATCTCTTTTCGATGCTGCACTTCTTTCTGCAGCTGCTGCATTTTCTCACTGTAAGCAAAGAGATGTTG
CTGACAAATTTGTAGGGTTCACCCACCGGGGTGAGGGGGAAACTATTTTATCCTCCCTTCTTTGGCCAATCAAAGGGAAGAATAATCTTGAACTTGTAAGTTGTAATGTG
TTATCTTCTGTTGATCTTATGTCATATGTGTATGAAACATTGCAAATCCCTGTTGTTGCTCTAAATGATGATGGAAAAGTAGTATTTGTCTCTGAGGAAGAAGGGGGAGA
AAACTTTGAGAAGGAACCTGTCAACAAAGAGAAAAGGAAACTGAAATTGAACTTTATTCCTTTCTCATTAACATGCCTACTCCACAAGAACTATATCTTGGCAGACCCTA
ATGCAGAGGAGGAGTCTGTCATGGAAACTATTGTGACCGTGGTTTTAGATTCATCTGGTCAACTGGTGTCCTTCTACAAGCCGGGTGGATCCATTCTTGCCTACACATCA
GCTGTTCAGGATTGTGTTGCATTGACAAGACAAAGATTGAAAGAACTACAGATGATTTTAGATGAAGCAATTTCTGGTATGGAAATTGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGACTGCCAAATGCTGCTTCCGGGGACTTGTCGTTGGAAATGGAGGTTGATGCTTTTAGACGACTCTTCCCAATTCAGTTTTTTGAGCGCCATCTTGCTGAATCAAT
ACGTCCTGATGGAAGAACATTGGGAAAAGCTAGAGATACAACCATTGCTCTTGGACCAGTATCATCTGCGAATGGGTCAGCCCTGGCTAAGATTGGTTCTACGACAATGT
TGGCTGCCATTAAAATGGAAGTAATGACGCCTTCCATAGAGTCACCGGATGAGGGTTGTATAGCTGTTGACTTTCATATGCCTCCAATATGCTCTCCCATTGTTAGGCCT
GGGAGACCAGCTGAAGCAGCACCTGTGATTTCAAAGCAGTTGTCTGATACTATTTCAAGTTCTGGGATGATTGATTTGAGAGAATTATCTCTTGTTAAAGGAAAAGCTGC
TTGGATGGCATACCTGGATATTTATTGCTTGGATGCTGATGGATCTCTTTTCGATGCTGCACTTCTTTCTGCAGCTGCTGCATTTTCTCACTGTAAGCAAAGAGATGTTG
CTGACAAATTTGTAGGGTTCACCCACCGGGGTGAGGGGGAAACTATTTTATCCTCCCTTCTTTGGCCAATCAAAGGGAAGAATAATCTTGAACTTGTAAGTTGTAATGTG
TTATCTTCTGTTGATCTTATGTCATATGTGTATGAAACATTGCAAATCCCTGTTGTTGCTCTAAATGATGATGGAAAAGTAGTATTTGTCTCTGAGGAAGAAGGGGGAGA
AAACTTTGAGAAGGAACCTGTCAACAAAGAGAAAAGGAAACTGAAATTGAACTTTATTCCTTTCTCATTAACATGCCTACTCCACAAGAACTATATCTTGGCAGACCCTA
ATGCAGAGGAGGAGTCTGTCATGGAAACTATTGTGACCGTGGTTTTAGATTCATCTGGTCAACTGGTGTCCTTCTACAAGCCGGGTGGATCCATTCTTGCCTACACATCA
GCTGTTCAGGATTGTGTTGCATTGACAAGACAAAGATTGAAAGAACTACAGATGATTTTAGATGAAGCAATTTCTGGTATGGAAATTGACTAA
Protein sequenceShow/hide protein sequence
MGLPNAASGDLSLEMEVDAFRRLFPIQFFERHLAESIRPDGRTLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRP
GRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHCKQRDVADKFVGFTHRGEGETILSSLLWPIKGKNNLELVSCNV
LSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNFIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSILAYTS
AVQDCVALTRQRLKELQMILDEAISGMEID