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Spg020127 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020127
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGATA zinc finger domain-containing protein 10-like isoform X2
Genome locationscaffold1:23601212..23601779
RNA-Seq ExpressionSpg020127
SyntenySpg020127
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK22189.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]6.5e-0535.4Show/hide
Query:  LDASSLERGPHMVT--RSCFQQIRDISED-LDVLNLCTSGEASMEQLQHMYRIPMPPPPGPRHRRRAREEDILVVHDEVH--HNYFQTPIPPYYEAGPSS
        +D+ +  R    VT  RS   ++RD+++D   VL++C + E  ME++ ++Y +P+ PPP  R R R  E ++  V+ +V   H   QT     Y  GPSS
Subjt:  LDASSLERGPHMVT--RSCFQQIRDISED-LDVLNLCTSGEASMEQLQHMYRIPMPPPPGPRHRRRAREEDILVVHDEVH--HNYFQTPIPPYYEAGPSS

Query:  SH-EAGPSSSYAH
        S+ +  PS+SY H
Subjt:  SH-EAGPSSSYAH
TrEMBL top hitse value%identityAlignment
A0A5D3DFZ9 GATA zinc finger domain-containing protein 10-like isoform X23.1e-0535.4Show/hide
Query:  LDASSLERGPHMVT--RSCFQQIRDISED-LDVLNLCTSGEASMEQLQHMYRIPMPPPPGPRHRRRAREEDILVVHDEVH--HNYFQTPIPPYYEAGPSS
        +D+ +  R    VT  RS   ++RD+++D   VL++C + E  ME++ ++Y +P+ PPP  R R R  E ++  V+ +V   H   QT     Y  GPSS
Subjt:  LDASSLERGPHMVT--RSCFQQIRDISED-LDVLNLCTSGEASMEQLQHMYRIPMPPPPGPRHRRRAREEDILVVHDEVH--HNYFQTPIPPYYEAGPSS

Query:  SH-EAGPSSSYAH
        S+ +  PS+SY H
Subjt:  SH-EAGPSSSYAH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAATGGAGACACAACTCCAGATTATATGGGGTGATATCATAATATTACTAGACGCTTCATCACTCGAGAGGGGGCCTCATATGGTCACGCGGTCATGTTTTCAACA
AATCCGTGATATAAGTGAAGATCTAGATGTTCTTAATCTGTGTACTAGTGGTGAGGCCAGTATGGAACAACTTCAGCATATGTACCGCATACCTATGCCACCTCCCCCAG
GTCCTAGGCATAGACGACGTGCTCGAGAGGAGGACATTCTAGTTGTACATGATGAAGTGCACCATAATTATTTTCAGACTCCGATTCCACCATACTATGAGGCTGGTCCA
TCATCATCACATGAGGCAGGTCCCTCATCGTCATATGCTCATAGAGAGCAACCAGAAGAACGAGAGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCTAATGGAGACACAACTCCAGATTATATGGGGTGATATCATAATATTACTAGACGCTTCATCACTCGAGAGGGGGCCTCATATGGTCACGCGGTCATGTTTTCAACA
AATCCGTGATATAAGTGAAGATCTAGATGTTCTTAATCTGTGTACTAGTGGTGAGGCCAGTATGGAACAACTTCAGCATATGTACCGCATACCTATGCCACCTCCCCCAG
GTCCTAGGCATAGACGACGTGCTCGAGAGGAGGACATTCTAGTTGTACATGATGAAGTGCACCATAATTATTTTCAGACTCCGATTCCACCATACTATGAGGCTGGTCCA
TCATCATCACATGAGGCAGGTCCCTCATCGTCATATGCTCATAGAGAGCAACCAGAAGAACGAGAGGAATAG
Protein sequenceShow/hide protein sequence
MLMETQLQIIWGDIIILLDASSLERGPHMVTRSCFQQIRDISEDLDVLNLCTSGEASMEQLQHMYRIPMPPPPGPRHRRRAREEDILVVHDEVHHNYFQTPIPPYYEAGP
SSSHEAGPSSSYAHREQPEEREE