; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg020133 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020133
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionE3 ubiquitin-protein ligase RNF181-like
Genome locationscaffold1:27717482..27723558
RNA-Seq ExpressionSpg020133
SyntenySpg020133
Gene Ontology termsNA
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571005.1 E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma subsp. sororia]2.3e-1742.03Show/hide
Query:  ACKVITGHVALYVVQMVAENREMNFHLVATVDQIHHS--W-MRLIPV---------RYAVIVEDAR---RPRMEKL----EEVGEDLGLCSICLDEFKSN
        A +VI+  +A + +Q+  E+ + N H+VA VD +  S  W ++ +PV         R  V+ E A    R RMEK+    EE  EDLG CSICLDE K  
Subjt:  ACKVITGHVALYVVQMVAENREMNFHLVATVDQIHHS--W-MRLIPV---------RYAVIVEDAR---RPRMEKL----EEVGEDLGLCSICLDEFKSN

Query:  NKGDVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPL
           +V++ PC HVY   CI +WL+N +SCPLCR+  PL
Subjt:  NKGDVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPL

XP_016899530.1 PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Cucumis melo]1.6e-1841.61Show/hide
Query:  ACKVITGHVALYVVQMVAENREMNFHLVATVDQIHHSWMRL------IPVRYAVIVEDA----------RRPRMEKLEEVGEDLGLCSICLDEFKSNNKG
        A + +   +A +++QM   N + NFH++A VD I   W+ L            V+ ++A           R    K EE  EDLG CSICLDE  S  K 
Subjt:  ACKVITGHVALYVVQMVAENREMNFHLVATVDQIHHSWMRL------IPVRYAVIVEDA----------RRPRMEKLEEVGEDLGLCSICLDEFKSNNKG

Query:  DVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPLED
        +V++IPC HVY   CI KWL+N NSCPLCR PLPL++
Subjt:  DVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPLED

XP_022944063.1 RING-H2 finger protein ATL16-like [Cucurbita moschata]1.8e-1742.34Show/hide
Query:  ACKVITGHVALYVVQMVAENREMNFHLVATVDQIHHS--W-MRLIPV---------RYAVIVEDAR---RPRMEKL---EEVGEDLGLCSICLDEFKSNN
        A +VI+  +A + +Q+  E+ + N H+VA VD +  S  W ++ +PV         R  V+ E A    R RMEK+   EE  EDLG CSICLDE K   
Subjt:  ACKVITGHVALYVVQMVAENREMNFHLVATVDQIHHS--W-MRLIPV---------RYAVIVEDAR---RPRMEKL---EEVGEDLGLCSICLDEFKSNN

Query:  KGDVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPL
          +V++ PC HVY   CI +WL+N +SCPLCR+  PL
Subjt:  KGDVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPL

XP_023512244.1 RING-H2 finger protein ATL16-like [Cucurbita pepo subsp. pepo]1.8e-1741.91Show/hide
Query:  ACKVITGHVALYVVQMVAENREMNFHLVATVDQIHHS--W-MRLIPV---------RYAVIVEDAR---RPRMEKL--EEVGEDLGLCSICLDEFKSNNK
        A ++I+  +A + +Q+  E+ + N H+VA VD +  S  W ++ +PV         R  V+ E A    R RMEK+  EE  EDLG CSICLDE K    
Subjt:  ACKVITGHVALYVVQMVAENREMNFHLVATVDQIHHS--W-MRLIPV---------RYAVIVEDAR---RPRMEKL--EEVGEDLGLCSICLDEFKSNNK

Query:  GDVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPL
         +V++ PC HVY   CI +WL+N +SCPLCR+  PL
Subjt:  GDVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPL

XP_038883574.1 E3 ubiquitin-protein ligase RNF181-like [Benincasa hispida]7.2e-1940.15Show/hide
Query:  ACKVITGHVALYVVQMVAENREMNFHLVATVDQIHHSWMRLIPV-------RYAVIVEDARRPR-------MEKLEEV--GEDLGLCSICLDEFKSNNKG
        AC+++   +A Y+ +M+ ENRE NF ++A VD     WM    +          V+ ++A  PR       +E++ E+   E+LG C ICL+E  S  K 
Subjt:  ACKVITGHVALYVVQMVAENREMNFHLVATVDQIHHSWMRLIPV-------RYAVIVEDARRPR-------MEKLEEV--GEDLGLCSICLDEFKSNNKG

Query:  DVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPLED
        +V++IPC HVY   C+ KWL   NSCPLCR PLPL D
Subjt:  DVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPLED

TrEMBL top hitse value%identityAlignment
A0A1S4DUZ4 E3 ubiquitin-protein ligase RNF181-like7.8e-1941.61Show/hide
Query:  ACKVITGHVALYVVQMVAENREMNFHLVATVDQIHHSWMRL------IPVRYAVIVEDA----------RRPRMEKLEEVGEDLGLCSICLDEFKSNNKG
        A + +   +A +++QM   N + NFH++A VD I   W+ L            V+ ++A           R    K EE  EDLG CSICLDE  S  K 
Subjt:  ACKVITGHVALYVVQMVAENREMNFHLVATVDQIHHSWMRL------IPVRYAVIVEDA----------RRPRMEKLEEVGEDLGLCSICLDEFKSNNKG

Query:  DVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPLED
        +V++IPC HVY   CI KWL+N NSCPLCR PLPL++
Subjt:  DVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPLED

A0A5D3E1S5 E3 ubiquitin-protein ligase RNF181-like protein7.8e-1941.61Show/hide
Query:  ACKVITGHVALYVVQMVAENREMNFHLVATVDQIHHSWMRL------IPVRYAVIVEDA----------RRPRMEKLEEVGEDLGLCSICLDEFKSNNKG
        A + +   +A +++QM   N + NFH++A VD I   W+ L            V+ ++A           R    K EE  EDLG CSICLDE  S  K 
Subjt:  ACKVITGHVALYVVQMVAENREMNFHLVATVDQIHHSWMRL------IPVRYAVIVEDA----------RRPRMEKLEEVGEDLGLCSICLDEFKSNNKG

Query:  DVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPLED
        +V++IPC HVY   CI KWL+N NSCPLCR PLPL++
Subjt:  DVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPLED

A0A6J1EKL4 E3 ubiquitin-protein ligase arkadia-like3.3e-1740.85Show/hide
Query:  ACKVITGHVALYVVQMVAENREMNFHLVATVDQIHHSWMRLIP------------VRYAVIVED--ARR-------PRMEKLEEVGEDLGLCSICLDEFK
        AC+VI   +A  + Q+ A NRE +FH+V  VD I + WM  +             V   V++++  ARR        R+E  EE  ++LG C ICLDE  
Subjt:  ACKVITGHVALYVVQMVAENREMNFHLVATVDQIHHSWMRLIP------------VRYAVIVED--ARR-------PRMEKLEEVGEDLGLCSICLDEFK

Query:  SNNKGDVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPLED
         N K +V++ PC HVY   CI +WL   NSCPLC+ PLPLE+
Subjt:  SNNKGDVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPLED

A0A6J1FXN0 RING-H2 finger protein ATL16-like8.6e-1842.34Show/hide
Query:  ACKVITGHVALYVVQMVAENREMNFHLVATVDQIHHS--W-MRLIPV---------RYAVIVEDAR---RPRMEKL---EEVGEDLGLCSICLDEFKSNN
        A +VI+  +A + +Q+  E+ + N H+VA VD +  S  W ++ +PV         R  V+ E A    R RMEK+   EE  EDLG CSICLDE K   
Subjt:  ACKVITGHVALYVVQMVAENREMNFHLVATVDQIHHS--W-MRLIPV---------RYAVIVEDAR---RPRMEKL---EEVGEDLGLCSICLDEFKSNN

Query:  KGDVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPL
          +V++ PC HVY   CI +WL+N +SCPLCR+  PL
Subjt:  KGDVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPL

A0A6J1J8T7 RING-H2 finger protein ATL16-like1.5e-1742.34Show/hide
Query:  ACKVITGHVALYVVQMVAENREMNFHLVATVDQIHHS--W-MRLIPV---------RYAVIVEDAR---RPRMEKLEEVGE---DLGLCSICLDEFKSNN
        A +VI   +A + +Q+  E+ + N H+VA VD +  S  W ++ +PV         R  V+ E A    R RMEK+EE  E   DLG CSICLDE K   
Subjt:  ACKVITGHVALYVVQMVAENREMNFHLVATVDQIHHS--W-MRLIPV---------RYAVIVEDAR---RPRMEKLEEVGE---DLGLCSICLDEFKSNN

Query:  KGDVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPL
          +V++ PC HVY   CI +WL+N +SCPLCR+  PL
Subjt:  KGDVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPL

SwissProt top hitse value%identityAlignment
P0CH30 E3 ubiquitin-protein ligase RING19.2e-0937.93Show/hide
Query:  VGEDLGLCSICLDEFKSNNKGDVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPLED
        +  +   C++C+D+F+     +  ++PC H+Y   C+L WLE  NSCP+CR  LP +D
Subjt:  VGEDLGLCSICLDEFKSNNKGDVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPLED

Q6AXU4 E3 ubiquitin-protein ligase RNF1815.4e-0937.62Show/hide
Query:  MNFHLVATVDQIHHSWMRLIPVRYAVIVEDARRP--RMEKLEEVGEDLGLCSICLDEFKSNNKGDVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPLE
        M+F  +  VD  HH    L P     +VE   R   R  K E        C +CL EF+      V+++PC H++ + CIL WL   NSCPLCR  LP +
Subjt:  MNFHLVATVDQIHHSWMRLIPVRYAVIVEDARRP--RMEKLEEVGEDLGLCSICLDEFKSNNKGDVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPLE

Query:  D
        D
Subjt:  D

Q8LPN7 E3 ubiquitin-protein ligase RING1-like4.9e-1045.45Show/hide
Query:  DLGLCSICLDEFKSNNKGDVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPLED
        ++  C++C+DEF+  +  DV ++PC HV+   C+L WLE  NSCP+CR  LP +D
Subjt:  DLGLCSICLDEFKSNNKGDVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPLED

Q9CY62 E3 ubiquitin-protein ligase RNF1813.1e-0937.37Show/hide
Query:  MNFHLVATVDQIHHSWMRLIPVRYAVIVEDARRPRMEKLEEVGEDLGLCSICLDEFKSNNKGDVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPLED
        M+F  +  VD  HH    L P     +VE   R     +     DL  C +CL EF++     V+++PC H++ + CIL WL   NSCPLCR  LP +D
Subjt:  MNFHLVATVDQIHHSWMRLIPVRYAVIVEDARRPRMEKLEEVGEDLGLCSICLDEFKSNNKGDVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPLED

Q9Y7K6 Uncharacterized RING finger protein C2A9.04c7.0e-0944Show/hide
Query:  CSICLDEFKSNNKGDVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPLE
        C IC D+   N++    K+PC H++   C+ KWLEN  +CPLCR  +P E
Subjt:  CSICLDEFKSNNKGDVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPLE

Arabidopsis top hitse value%identityAlignment
AT1G18760.1 Zinc finger, C3HC4 type (RING finger) family protein1.7e-1049.02Show/hide
Query:  CSICLDEFKSNNKGDVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPLED
        C+ICL+EF    K  V+ +PC H +D  C+L W E  + CPLCR  LP ED
Subjt:  CSICLDEFKSNNKGDVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPLED

AT1G18770.1 RING/U-box superfamily protein1.3e-1039.74Show/hide
Query:  PVRYAVIVEDARRPRMEKLEEVGEDLGLCSICLDEFKSNNKGDVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPLE
        P    V+   AR+         GE   +C ICL+EF    +  VV +PC H +D  C+LKW E  +SCPLCR  LP +
Subjt:  PVRYAVIVEDARRPRMEKLEEVGEDLGLCSICLDEFKSNNKGDVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPLE

AT1G60360.1 RING/U-box superfamily protein1.3e-1041.38Show/hide
Query:  EEVGEDLGLCSICLDEFKSNNKGDVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPL
        + +  D+  C++C++EF     GD  ++PC H+Y   CI+ WL   NSCP+CR  LPL
Subjt:  EEVGEDLGLCSICLDEFKSNNKGDVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPL

AT3G19950.1 RING/U-box superfamily protein3.4e-1145.45Show/hide
Query:  DLGLCSICLDEFKSNNKGDVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPLED
        ++  C++C+DEF+  +  DV ++PC HV+   C+L WLE  NSCP+CR  LP +D
Subjt:  DLGLCSICLDEFKSNNKGDVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPLED

AT5G08139.1 RING/U-box superfamily protein2.9e-1042.86Show/hide
Query:  LEEVGEDLG--LCSICLDEFKSNNKGDVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPLED
        LE   +D G  +C++C DE    NK   V++PC+H Y + CI+ WL+ +N+CP+CR  LP +D
Subjt:  LEEVGEDLG--LCSICLDEFKSNNKGDVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPLED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATACCTTTCACCCCACCCCAGGGGTCCTATATATAGACCCTCAGCTGCACTCTTCTCACTGCAGAATATTTCTGTGTCCACGGATATCGACCAATACTACAAGTC
AGTCCTTCACGTGTGTTCCCCTGGAGTGATTAATTCTTTATTTAATTTGCAAGACTTCCCCCACGCTGTTTTCAACGAAATATTAGTTGCTTCCTCAAACGAGCAACTGA
ATGCCCAGTGGAGGTTGTCTAGGATGAGGGCAAGAACATTCCAGTCAGCATACCTGAAGTGTGAGGCTAACACTTGGCTTAGCTTTGTCAAGCAGAGGTTATTGCCTACC
ACGTACGACTTCACTATCCCCTGTGATCGAGTACACTTGAAGCAGTGCGTTGTTTTGCAGGATGCTCAGATTTCACCCAATCAGAGCATGTATGCAACTCTTGATGACAA
TTTATTTTTCGCTTGCAAGGTCATCACTGGGCATGTAGCGTTGTACGTTGTTCAAATGGTGGCCGAAAACAGAGAGATGAACTTCCATCTCGTCGCCACCGTCGACCAAA
TCCACCATAGCTGGATGCGGCTGATCCCCGTACGGTATGCGGTGATCGTTGAAGATGCTCGGCGGCCGAGGATGGAGAAGTTGGAAGAGGTTGGGGAAGATTTGGGACTC
TGCAGTATCTGTTTGGACGAATTCAAAAGCAACAACAAGGGGGACGTGGTAAAGATTCCTTGCGACCATGTGTATGATGCACCATGCATCTTGAAGTGGCTCGAAAACAA
AAATTCTTGCCCTTTGTGCAGAAGCCCACTCCCATTGGAGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGATACCTTTCACCCCACCCCAGGGGTCCTATATATAGACCCTCAGCTGCACTCTTCTCACTGCAGAATATTTCTGTGTCCACGGATATCGACCAATACTACAAGTC
AGTCCTTCACGTGTGTTCCCCTGGAGTGATTAATTCTTTATTTAATTTGCAAGACTTCCCCCACGCTGTTTTCAACGAAATATTAGTTGCTTCCTCAAACGAGCAACTGA
ATGCCCAGTGGAGGTTGTCTAGGATGAGGGCAAGAACATTCCAGTCAGCATACCTGAAGTGTGAGGCTAACACTTGGCTTAGCTTTGTCAAGCAGAGGTTATTGCCTACC
ACGTACGACTTCACTATCCCCTGTGATCGAGTACACTTGAAGCAGTGCGTTGTTTTGCAGGATGCTCAGATTTCACCCAATCAGAGCATGTATGCAACTCTTGATGACAA
TTTATTTTTCGCTTGCAAGGTCATCACTGGGCATGTAGCGTTGTACGTTGTTCAAATGGTGGCCGAAAACAGAGAGATGAACTTCCATCTCGTCGCCACCGTCGACCAAA
TCCACCATAGCTGGATGCGGCTGATCCCCGTACGGTATGCGGTGATCGTTGAAGATGCTCGGCGGCCGAGGATGGAGAAGTTGGAAGAGGTTGGGGAAGATTTGGGACTC
TGCAGTATCTGTTTGGACGAATTCAAAAGCAACAACAAGGGGGACGTGGTAAAGATTCCTTGCGACCATGTGTATGATGCACCATGCATCTTGAAGTGGCTCGAAAACAA
AAATTCTTGCCCTTTGTGCAGAAGCCCACTCCCATTGGAGGATTGA
Protein sequenceShow/hide protein sequence
MGYLSPHPRGPIYRPSAALFSLQNISVSTDIDQYYKSVLHVCSPGVINSLFNLQDFPHAVFNEILVASSNEQLNAQWRLSRMRARTFQSAYLKCEANTWLSFVKQRLLPT
TYDFTIPCDRVHLKQCVVLQDAQISPNQSMYATLDDNLFFACKVITGHVALYVVQMVAENREMNFHLVATVDQIHHSWMRLIPVRYAVIVEDARRPRMEKLEEVGEDLGL
CSICLDEFKSNNKGDVVKIPCDHVYDAPCILKWLENKNSCPLCRSPLPLED