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Spg020140 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020140
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPMD domain-containing protein
Genome locationscaffold1:27207236..27211865
RNA-Seq ExpressionSpg020140
SyntenySpg020140
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036933.1 uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa]6.1e-3446.79Show/hide
Query:  KKSRFSQKYGHIAELMYVPTSQGMLRALLHQWDPTHKCFVFESFDLTPVLEEYQALLHMSFQSEGLVYIHNKQTTAKRALSRTLGGIRASEIEKHTVKKG
        ++  FS+KYGHIAELMY+P +   LRA+++  DP + CF F S DL P +EEYQA+L M  +   +VY  N + T KR LS+ L  + A+EI+K+   KG
Subjt:  KKSRFSQKYGHIAELMYVPTSQGMLRALLHQWDPTHKCFVFESFDLTPVLEEYQALLHMSFQSEGLVYIHNKQTTAKRALSRTLGGIRASEIEKHTVKKG

Query:  DSNCLPLEYLLNLSQQFKEEEKKM-MLALCIYGAVLFPKIQGHVEERVVKLFCQVE
            +P +YL+ ++Q + +E+K + +LALCIYGAV+FPK +G+V+ +V+KLF Q+E
Subjt:  DSNCLPLEYLLNLSQQFKEEEKKM-MLALCIYGAVLFPKIQGHVEERVVKLFCQVE

KAA0036941.1 girdin-like [Cucumis melo var. makuwa]3.1e-3346.15Show/hide
Query:  KKSRFSQKYGHIAELMYVPTSQGMLRALLHQWDPTHKCFVFESFDLTPVLEEYQALLHMSFQSEGLVYIHNKQTTAKRALSRTLGGIRASEIEKHTVKKG
        ++  FS+KYGHIAELMY+P +   LRA+++  DP + CF F S +L P +EEYQA+L M  +   +VY  N + T KR LS+ L  + A+EI+K+   KG
Subjt:  KKSRFSQKYGHIAELMYVPTSQGMLRALLHQWDPTHKCFVFESFDLTPVLEEYQALLHMSFQSEGLVYIHNKQTTAKRALSRTLGGIRASEIEKHTVKKG

Query:  DSNCLPLEYLLNLSQQFKEEEKKM-MLALCIYGAVLFPKIQGHVEERVVKLFCQVE
            +P +YL+ ++Q + +E+K + +LALCIYGAV+FPK +G+V+ +V+KLF Q+E
Subjt:  DSNCLPLEYLLNLSQQFKEEEKKM-MLALCIYGAVLFPKIQGHVEERVVKLFCQVE

KAA0036949.1 girdin-like [Cucumis melo var. makuwa]6.1e-3446.79Show/hide
Query:  KKSRFSQKYGHIAELMYVPTSQGMLRALLHQWDPTHKCFVFESFDLTPVLEEYQALLHMSFQSEGLVYIHNKQTTAKRALSRTLGGIRASEIEKHTVKKG
        ++  FS+KYGHIAELMY+P +   LRA+++  DP + CF F S DL P +EEYQA+L M  +   +VY  N + T KR LS+ L  + A+EI+K+   KG
Subjt:  KKSRFSQKYGHIAELMYVPTSQGMLRALLHQWDPTHKCFVFESFDLTPVLEEYQALLHMSFQSEGLVYIHNKQTTAKRALSRTLGGIRASEIEKHTVKKG

Query:  DSNCLPLEYLLNLSQQFKEEEKKM-MLALCIYGAVLFPKIQGHVEERVVKLFCQVE
            +P +YL+ ++Q + +E+K + +LALCIYGAV+FPK +G+V+ +V+KLF Q+E
Subjt:  DSNCLPLEYLLNLSQQFKEEEKKM-MLALCIYGAVLFPKIQGHVEERVVKLFCQVE

KAA0060423.1 uncharacterized protein E6C27_scaffold22G002420 [Cucumis melo var. makuwa]2.8e-3446.15Show/hide
Query:  KKSRFSQKYGHIAELMYVPTSQGMLRALLHQWDPTHKCFVFESFDLTPVLEEYQALLHMSFQSEGLVYIHNKQTTAKRALSRTLGGIRASEIEKHTVKKG
        ++  FS+KYGHI ELMY+P +   LRA+++ WDP + CF F S DL P +EEYQA+L M  +   +VY  N + T KR LS+ L  + A+EI+K+   KG
Subjt:  KKSRFSQKYGHIAELMYVPTSQGMLRALLHQWDPTHKCFVFESFDLTPVLEEYQALLHMSFQSEGLVYIHNKQTTAKRALSRTLGGIRASEIEKHTVKKG

Query:  DSNCLPLEYLLNLSQQFKEEEKKM-MLALCIYGAVLFPKIQGHVEERVVKLFCQVE
            +P +YL+ ++Q + +E+K + +LALCIYGAV+FPK +G+V+ +V+KLF ++E
Subjt:  DSNCLPLEYLLNLSQQFKEEEKKM-MLALCIYGAVLFPKIQGHVEERVVKLFCQVE

XP_022147190.1 uncharacterized protein LOC111016201 [Momordica charantia]1.1e-3548.08Show/hide
Query:  KKSRFSQKYGHIAELMYVPTSQGMLRALLHQWDPTHKCFVFESFDLTPVLEEYQALLHMSFQSEGLVYIHNKQTTAKRALSRTLGGIRASEIEKHTVKKG
        +K++F +KYGHIA+L+YV  +  +LRAL+  WDP ++CF F S D+TP +EEY  LL +  Q +  VY ++   T KRA+S  +G I A EIEKH  +KG
Subjt:  KKSRFSQKYGHIAELMYVPTSQGMLRALLHQWDPTHKCFVFESFDLTPVLEEYQALLHMSFQSEGLVYIHNKQTTAKRALSRTLGGIRASEIEKHTVKKG

Query:  DSNCLPLEYLLNLSQQFKEEEKKM-MLALCIYGAVLFPKIQGHVEERVVKLFCQVE
        ++ CLP+EY+ +L  +F  EE+++ +LALC++  VLFP +  +VEE VVKLF +VE
Subjt:  DSNCLPLEYLLNLSQQFKEEEKKM-MLALCIYGAVLFPKIQGHVEERVVKLFCQVE

TrEMBL top hitse value%identityAlignment
A0A5A7T1W2 Retrotrans_gag domain-containing protein3.0e-3446.79Show/hide
Query:  KKSRFSQKYGHIAELMYVPTSQGMLRALLHQWDPTHKCFVFESFDLTPVLEEYQALLHMSFQSEGLVYIHNKQTTAKRALSRTLGGIRASEIEKHTVKKG
        ++  FS+KYGHIAELMY+P +   LRA+++  DP + CF F S DL P +EEYQA+L M  +   +VY  N + T KR LS+ L  + A+EI+K+   KG
Subjt:  KKSRFSQKYGHIAELMYVPTSQGMLRALLHQWDPTHKCFVFESFDLTPVLEEYQALLHMSFQSEGLVYIHNKQTTAKRALSRTLGGIRASEIEKHTVKKG

Query:  DSNCLPLEYLLNLSQQFKEEEKKM-MLALCIYGAVLFPKIQGHVEERVVKLFCQVE
            +P +YL+ ++Q + +E+K + +LALCIYGAV+FPK +G+V+ +V+KLF Q+E
Subjt:  DSNCLPLEYLLNLSQQFKEEEKKM-MLALCIYGAVLFPKIQGHVEERVVKLFCQVE

A0A5A7T5S7 Girdin-like1.5e-3346.15Show/hide
Query:  KKSRFSQKYGHIAELMYVPTSQGMLRALLHQWDPTHKCFVFESFDLTPVLEEYQALLHMSFQSEGLVYIHNKQTTAKRALSRTLGGIRASEIEKHTVKKG
        ++  FS+KYGHIAELMY+P +   LRA+++  DP + CF F S +L P +EEYQA+L M  +   +VY  N + T KR LS+ L  + A+EI+K+   KG
Subjt:  KKSRFSQKYGHIAELMYVPTSQGMLRALLHQWDPTHKCFVFESFDLTPVLEEYQALLHMSFQSEGLVYIHNKQTTAKRALSRTLGGIRASEIEKHTVKKG

Query:  DSNCLPLEYLLNLSQQFKEEEKKM-MLALCIYGAVLFPKIQGHVEERVVKLFCQVE
            +P +YL+ ++Q + +E+K + +LALCIYGAV+FPK +G+V+ +V+KLF Q+E
Subjt:  DSNCLPLEYLLNLSQQFKEEEKKM-MLALCIYGAVLFPKIQGHVEERVVKLFCQVE

A0A5A7T6E2 Girdin-like3.0e-3446.79Show/hide
Query:  KKSRFSQKYGHIAELMYVPTSQGMLRALLHQWDPTHKCFVFESFDLTPVLEEYQALLHMSFQSEGLVYIHNKQTTAKRALSRTLGGIRASEIEKHTVKKG
        ++  FS+KYGHIAELMY+P +   LRA+++  DP + CF F S DL P +EEYQA+L M  +   +VY  N + T KR LS+ L  + A+EI+K+   KG
Subjt:  KKSRFSQKYGHIAELMYVPTSQGMLRALLHQWDPTHKCFVFESFDLTPVLEEYQALLHMSFQSEGLVYIHNKQTTAKRALSRTLGGIRASEIEKHTVKKG

Query:  DSNCLPLEYLLNLSQQFKEEEKKM-MLALCIYGAVLFPKIQGHVEERVVKLFCQVE
            +P +YL+ ++Q + +E+K + +LALCIYGAV+FPK +G+V+ +V+KLF Q+E
Subjt:  DSNCLPLEYLLNLSQQFKEEEKKM-MLALCIYGAVLFPKIQGHVEERVVKLFCQVE

A0A5A7UWQ6 Uncharacterized protein1.3e-3446.15Show/hide
Query:  KKSRFSQKYGHIAELMYVPTSQGMLRALLHQWDPTHKCFVFESFDLTPVLEEYQALLHMSFQSEGLVYIHNKQTTAKRALSRTLGGIRASEIEKHTVKKG
        ++  FS+KYGHI ELMY+P +   LRA+++ WDP + CF F S DL P +EEYQA+L M  +   +VY  N + T KR LS+ L  + A+EI+K+   KG
Subjt:  KKSRFSQKYGHIAELMYVPTSQGMLRALLHQWDPTHKCFVFESFDLTPVLEEYQALLHMSFQSEGLVYIHNKQTTAKRALSRTLGGIRASEIEKHTVKKG

Query:  DSNCLPLEYLLNLSQQFKEEEKKM-MLALCIYGAVLFPKIQGHVEERVVKLFCQVE
            +P +YL+ ++Q + +E+K + +LALCIYGAV+FPK +G+V+ +V+KLF ++E
Subjt:  DSNCLPLEYLLNLSQQFKEEEKKM-MLALCIYGAVLFPKIQGHVEERVVKLFCQVE

A0A6J1CZG4 uncharacterized protein LOC1110162015.4e-3648.08Show/hide
Query:  KKSRFSQKYGHIAELMYVPTSQGMLRALLHQWDPTHKCFVFESFDLTPVLEEYQALLHMSFQSEGLVYIHNKQTTAKRALSRTLGGIRASEIEKHTVKKG
        +K++F +KYGHIA+L+YV  +  +LRAL+  WDP ++CF F S D+TP +EEY  LL +  Q +  VY ++   T KRA+S  +G I A EIEKH  +KG
Subjt:  KKSRFSQKYGHIAELMYVPTSQGMLRALLHQWDPTHKCFVFESFDLTPVLEEYQALLHMSFQSEGLVYIHNKQTTAKRALSRTLGGIRASEIEKHTVKKG

Query:  DSNCLPLEYLLNLSQQFKEEEKKM-MLALCIYGAVLFPKIQGHVEERVVKLFCQVE
        ++ CLP+EY+ +L  +F  EE+++ +LALC++  VLFP +  +VEE VVKLF +VE
Subjt:  DSNCLPLEYLLNLSQQFKEEEKKM-MLALCIYGAVLFPKIQGHVEERVVKLFCQVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCCGCACAGGTCAACAAAATTCCTCGCTTGGGTTATTTCTCTTGTTGTGATAATCTTCCAAAGAAAAGCAGATTTTCACAAAAATATGGTCACATAGCAGAGTT
GATGTACGTTCCAACCAGTCAAGGCATGCTAAGGGCATTACTTCATCAGTGGGATCCAACACACAAATGTTTTGTGTTCGAATCTTTTGACTTGACTCCTGTGCTTGAAG
AGTACCAAGCACTTCTCCATATGTCATTTCAATCAGAGGGTTTGGTTTACATCCATAACAAGCAAACTACCGCAAAAAGAGCTCTGTCACGCACCTTGGGAGGGATTCGA
GCATCTGAGATAGAAAAGCACACAGTAAAAAAGGGTGATAGCAATTGTTTACCACTAGAATACCTCCTCAATCTCAGCCAGCAATTCAAAGAAGAGGAAAAGAAGATGAT
GTTAGCTTTATGCATTTATGGGGCAGTATTATTCCCCAAAATTCAGGGACATGTTGAGGAAAGAGTTGTGAAATTATTTTGCCAAGTTGAGTTTGTGGGGATGTGTGGGC
ATCAGGCTTTAGAAGGAGAATGTAACCGCCCAGCTAATCAAGTTGTGGAGGCTGAAGGGTTGAGGCAGGAGTATGACCTTCTAACACAAAACTATGAGGATACCCAAAGT
TGTTTAGTAGAAGCTGTAAGAATATTCAGGATCATGGCAACAAAGGCAGAGGTGTTTTTTGAAGAAGCTCAAGGTTTAAAAGGAGGAGTCATCCCAACGCAGCCAAACGG
AGAGCAGCTTGGTAGGTTTCTCGAGGACTTATGCGAAGAATTAGGCTACTTAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCCGCACAGGTCAACAAAATTCCTCGCTTGGGTTATTTCTCTTGTTGTGATAATCTTCCAAAGAAAAGCAGATTTTCACAAAAATATGGTCACATAGCAGAGTT
GATGTACGTTCCAACCAGTCAAGGCATGCTAAGGGCATTACTTCATCAGTGGGATCCAACACACAAATGTTTTGTGTTCGAATCTTTTGACTTGACTCCTGTGCTTGAAG
AGTACCAAGCACTTCTCCATATGTCATTTCAATCAGAGGGTTTGGTTTACATCCATAACAAGCAAACTACCGCAAAAAGAGCTCTGTCACGCACCTTGGGAGGGATTCGA
GCATCTGAGATAGAAAAGCACACAGTAAAAAAGGGTGATAGCAATTGTTTACCACTAGAATACCTCCTCAATCTCAGCCAGCAATTCAAAGAAGAGGAAAAGAAGATGAT
GTTAGCTTTATGCATTTATGGGGCAGTATTATTCCCCAAAATTCAGGGACATGTTGAGGAAAGAGTTGTGAAATTATTTTGCCAAGTTGAGTTTGTGGGGATGTGTGGGC
ATCAGGCTTTAGAAGGAGAATGTAACCGCCCAGCTAATCAAGTTGTGGAGGCTGAAGGGTTGAGGCAGGAGTATGACCTTCTAACACAAAACTATGAGGATACCCAAAGT
TGTTTAGTAGAAGCTGTAAGAATATTCAGGATCATGGCAACAAAGGCAGAGGTGTTTTTTGAAGAAGCTCAAGGTTTAAAAGGAGGAGTCATCCCAACGCAGCCAAACGG
AGAGCAGCTTGGTAGGTTTCTCGAGGACTTATGCGAAGAATTAGGCTACTTAAGATGA
Protein sequenceShow/hide protein sequence
MAPAQVNKIPRLGYFSCCDNLPKKSRFSQKYGHIAELMYVPTSQGMLRALLHQWDPTHKCFVFESFDLTPVLEEYQALLHMSFQSEGLVYIHNKQTTAKRALSRTLGGIR
ASEIEKHTVKKGDSNCLPLEYLLNLSQQFKEEEKKMMLALCIYGAVLFPKIQGHVEERVVKLFCQVEFVGMCGHQALEGECNRPANQVVEAEGLRQEYDLLTQNYEDTQS
CLVEAVRIFRIMATKAEVFFEEAQGLKGGVIPTQPNGEQLGRFLEDLCEELGYLR