CuGenDBv2

Gene ID	Spg020142
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	NADH:ubiquinone oxidoreductase, ESSS subunit
Genome location	scaffold1:26678770..26679132
RNA-Seq Expression	Spg020142
Synteny	Spg020142
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022151653.1 uncharacterized protein LOC111019565 [Momordica charantia]

5.4e-59

93.33

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Query:  MPSPTPFTTASNMLRHRLLPSLRTRGGASAGQSRWTSPGHEERPKGYLFNRTPSPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSP PFT ASNMLRHRLLP+LRTRGGA+AGQSRWTSPGHEERPKGYLFNRTP PPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFTTASNMLRHRLLPSLRTRGGASAGQSRWTSPGHEERPKGYLFNRTPSPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMEKLGISASGSSESD
        LERLEME +GISASGSSESD
Subjt:  LERLEMEKLGISASGSSESD

XP_022925065.1 uncharacterized protein LOC111432424 [Cucurbita moschata]

4.5e-58

92.5

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Query:  MPSPTPFTTASNMLRHRLLPSLRTRGGASAGQSRWTSPGHEERPKGYLFNRTPSPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSPTPF TASNMLRHRLLPSLRTRGGA+ GQSRWTSPGHEE+PKGYLFNRTP PPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFTTASNMLRHRLLPSLRTRGGASAGQSRWTSPGHEERPKGYLFNRTPSPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMEKLGISASGSSESD
        LERLEME L +S SGSSESD
Subjt:  LERLEMEKLGISASGSSESD

XP_022966491.1 uncharacterized protein LOC111466129 [Cucurbita maxima]

2.7e-58

93.33

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Query:  MPSPTPFTTASNMLRHRLLPSLRTRGGASAGQSRWTSPGHEERPKGYLFNRTPSPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSPTPF TASNMLRHRLLPSLRTRGGA+ GQSRWTSPGHEE+PKGYLFNRTP PPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFTTASNMLRHRLLPSLRTRGGASAGQSRWTSPGHEERPKGYLFNRTPSPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMEKLGISASGSSESD
        LERLEME L IS SGSSESD
Subjt:  LERLEMEKLGISASGSSESD

XP_023517134.1 uncharacterized protein LOC111780983 [Cucurbita pepo subsp. pepo]

7.0e-59

94.17

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Query:  MPSPTPFTTASNMLRHRLLPSLRTRGGASAGQSRWTSPGHEERPKGYLFNRTPSPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSPTPF TASNMLRHRLLPSLRTRGGA+ GQSRWTSPGHEERPKGYLFNRTP PPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFTTASNMLRHRLLPSLRTRGGASAGQSRWTSPGHEERPKGYLFNRTPSPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMEKLGISASGSSESD
        LERLEME L +SASGSSESD
Subjt:  LERLEMEKLGISASGSSESD

XP_038881129.1 uncharacterized protein LOC120072731 [Benincasa hispida]

4.9e-60

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Query:  MPSPTPFTTASNMLRHRLLPSLRTRGGASAGQSRWTSPGHEERPKGYLFNRTPSPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSPTPFT ASNMLRHRLLPSLRTRGGA+AGQSRWTSPGHE+RPKGYLFNRTP PPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFTTASNMLRHRLLPSLRTRGGASAGQSRWTSPGHEERPKGYLFNRTPSPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMEKLGISASGSSESD
        LERLEMEKLG+S SGSSESD
Subjt:  LERLEMEKLGISASGSSESD

TrEMBL top hits

e value

%identity

Alignment

A0A067KZT1 Uncharacterized protein

1.2e-53

88.14

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Query:  MPSPTPFTTASNMLRHRLLPSLRTRGGASAGQSRWTSPGHEERPKGYLFNRTPSPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSP PFTTAS MLR RL  SLRTRGG +AG SRWTSPGHEERPKGYLFNRTP P GQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFTTASNMLRHRLLPSLRTRGGASAGQSRWTSPGHEERPKGYLFNRTPSPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMEKLGISASGSSE
        LERLEMEKLG+S SG SE
Subjt:  LERLEMEKLGISASGSSE

A0A2C9V8P2 Uncharacterized protein

1.6e-53

88.14

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Query:  MPSPTPFTTASNMLRHRLLPSLRTRGGASAGQSRWTSPGHEERPKGYLFNRTPSPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSP PFTTAS+MLR RL  SLR RGGA+AG SRWTSPGHEERPKGYLFNRTP PPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDL+IETWAHQKA
Subjt:  MPSPTPFTTASNMLRHRLLPSLRTRGGASAGQSRWTSPGHEERPKGYLFNRTPSPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMEKLGISASGSSE
        LERLEMEKLG S SG SE
Subjt:  LERLEMEKLGISASGSSE

A0A6J1DCT8 uncharacterized protein LOC111019565

2.6e-59

93.33

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Query:  MPSPTPFTTASNMLRHRLLPSLRTRGGASAGQSRWTSPGHEERPKGYLFNRTPSPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSP PFT ASNMLRHRLLP+LRTRGGA+AGQSRWTSPGHEERPKGYLFNRTP PPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFTTASNMLRHRLLPSLRTRGGASAGQSRWTSPGHEERPKGYLFNRTPSPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMEKLGISASGSSESD
        LERLEME +GISASGSSESD
Subjt:  LERLEMEKLGISASGSSESD

A0A6J1EGU8 uncharacterized protein LOC111432424

2.2e-58

92.5

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Query:  MPSPTPFTTASNMLRHRLLPSLRTRGGASAGQSRWTSPGHEERPKGYLFNRTPSPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSPTPF TASNMLRHRLLPSLRTRGGA+ GQSRWTSPGHEE+PKGYLFNRTP PPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFTTASNMLRHRLLPSLRTRGGASAGQSRWTSPGHEERPKGYLFNRTPSPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMEKLGISASGSSESD
        LERLEME L +S SGSSESD
Subjt:  LERLEMEKLGISASGSSESD

A0A6J1HPH2 uncharacterized protein LOC111466129

1.3e-58

93.33

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Query:  MPSPTPFTTASNMLRHRLLPSLRTRGGASAGQSRWTSPGHEERPKGYLFNRTPSPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSPTPF TASNMLRHRLLPSLRTRGGA+ GQSRWTSPGHEE+PKGYLFNRTP PPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFTTASNMLRHRLLPSLRTRGGASAGQSRWTSPGHEERPKGYLFNRTPSPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMEKLGISASGSSESD
        LERLEME L IS SGSSESD
Subjt:  LERLEMEKLGISASGSSESD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G42310.1 unknown protein

7.5e-43

70.69

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Query:  MPSPTPFTTASNMLRHRLLPSLRTRGGASAGQSRWTSPGHEERPKGYLFNRTPSPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPS    T A+  LR+R+       G  SAG SRW +PGHEERPKGY  NRTP  PGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDL+IETWAHQKA
Subjt:  MPSPTPFTTASNMLRHRLLPSLRTRGGASAGQSRWTSPGHEERPKGYLFNRTPSPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMEKLGISASGS
        LERLEMEKL  +   S
Subjt:  LERLEMEKLGISASGS

AT3G57785.1 unknown protein

3.7e-42

70.69

Show/hide

Query:  MPSPTPFTTASNMLRHRLLPSLRTRGGASAGQSRWTSPGHEERPKGYLFNRTPSPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        M S  P   A+  LR+R+    R+ G  S G SRW +PGHEERPKGY  NRTP PPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDL+IETWAHQKA
Subjt:  MPSPTPFTTASNMLRHRLLPSLRTRGGASAGQSRWTSPGHEERPKGYLFNRTPSPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMEKLGISASGS
        LERLEMEKL  +   S
Subjt:  LERLEMEKLGISASGS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCCATCGCCAACGCCCTTTACGACCGCCTCAAATATGCTCCGGCACCGCCTTCTCCCTTCTCTTCGGACCCGCGGCGGCGCCTCCGCCGGCCAGAGCCGATGGACCAG
TCCTGGCCACGAGGAGCGGCCTAAGGGCTATCTTTTCAATCGGACGCCGTCTCCACCAGGTCAGTCCCGTAAATGGGAGGATTGGGAGCTTCCTTGTTATGTTACTAGTT
TTCTTACTATTGTGATTCTTGGCGTTGGCCTCAACGCCAAGCCTGATCTCACAATTGAGACTTGGGCTCACCAGAAAGCCCTCGAGCGCCTTGAGATGGAGAAGCTCGGT
ATCTCTGCCTCTGGATCATCTGAATCTGATTGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MPSPTPFTTASNMLRHRLLPSLRTRGGASAGQSRWTSPGHEERPKGYLFNRTPSPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEKLG
ISASGSSESD

Spg020142 (gene) of Sponge gourd (cylindrica) v1 genome