CuGenDBv2

Gene ID	Spg020149
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	ABC transporter A family member 1 isoform A
Genome location	scaffold1:22328218..22330129
RNA-Seq Expression	Spg020149
Synteny	Spg020149
Gene Ontology terms	GO:0055085 - transmembrane transport (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0005524 - ATP binding (molecular function) GO:0016887 - ATPase activity (molecular function) GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_011653432.1 ABC transporter A family member 1 isoform X1 [Cucumis sativus]

1.6e-50

89.83

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Query:  MGTAWRQLKAMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIRKGMFVEVGKGISPNFQEVLESLWKNGEYLAFAPDTVETKTM
        MG AWRQLK MLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHI+KGMFVEVGKGISP+FQEVL SL KNGEYLAFAPDTVETKTM
Subjt:  MGTAWRQLKAMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIRKGMFVEVGKGISPNFQEVLESLWKNGEYLAFAPDTVETKTM

Query:  LDLMSIKFPLLEVHISTY
        L LMS+KFPLLEV    Y
Subjt:  LDLMSIKFPLLEVHISTY

XP_023543867.1 ABC transporter A family member 1 [Cucurbita pepo subsp. pepo]

6.0e-50

88.98

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Query:  MGTAWRQLKAMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIRKGMFVEVGKGISPNFQEVLESLWKNGEYLAFAPDTVETKTM
        M TAWRQLKAMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIRKGMFVEVGKGISP+FQEVL+SL KN EYLAFAPDTVETK M
Subjt:  MGTAWRQLKAMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIRKGMFVEVGKGISPNFQEVLESLWKNGEYLAFAPDTVETKTM

Query:  LDLMSIKFPLLEVHISTY
        L +MSIKFPL+EV    Y
Subjt:  LDLMSIKFPLLEVHISTY

XP_031740232.1 ABC transporter A family member 1 isoform X2 [Cucumis sativus]

1.6e-50

89.83

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Query:  MGTAWRQLKAMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIRKGMFVEVGKGISPNFQEVLESLWKNGEYLAFAPDTVETKTM
        MG AWRQLK MLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHI+KGMFVEVGKGISP+FQEVL SL KNGEYLAFAPDTVETKTM
Subjt:  MGTAWRQLKAMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIRKGMFVEVGKGISPNFQEVLESLWKNGEYLAFAPDTVETKTM

Query:  LDLMSIKFPLLEVHISTY
        L LMS+KFPLLEV    Y
Subjt:  LDLMSIKFPLLEVHISTY

XP_038881443.1 ABC transporter A family member 1 isoform X1 [Benincasa hispida]

6.0e-50

88.98

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Query:  MGTAWRQLKAMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIRKGMFVEVGKGISPNFQEVLESLWKNGEYLAFAPDTVETKTM
        MG AWRQL+ MLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHI KGMFVEVGKGISP+FQEVLESL K+GEYLAFAPDTVETKTM
Subjt:  MGTAWRQLKAMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIRKGMFVEVGKGISPNFQEVLESLWKNGEYLAFAPDTVETKTM

Query:  LDLMSIKFPLLEVHISTY
        L LMSIKFPLL+V    Y
Subjt:  LDLMSIKFPLLEVHISTY

XP_038881444.1 ABC transporter A family member 1 isoform X2 [Benincasa hispida]

6.0e-50

88.98

Show/hide

Query:  MGTAWRQLKAMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIRKGMFVEVGKGISPNFQEVLESLWKNGEYLAFAPDTVETKTM
        MG AWRQL+ MLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHI KGMFVEVGKGISP+FQEVLESL K+GEYLAFAPDTVETKTM
Subjt:  MGTAWRQLKAMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIRKGMFVEVGKGISPNFQEVLESLWKNGEYLAFAPDTVETKTM

Query:  LDLMSIKFPLLEVHISTY
        L LMSIKFPLL+V    Y
Subjt:  LDLMSIKFPLLEVHISTY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KYE2 Uncharacterized protein

7.6e-51

89.83

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Query:  MGTAWRQLKAMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIRKGMFVEVGKGISPNFQEVLESLWKNGEYLAFAPDTVETKTM
        MG AWRQLK MLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHI+KGMFVEVGKGISP+FQEVL SL KNGEYLAFAPDTVETKTM
Subjt:  MGTAWRQLKAMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIRKGMFVEVGKGISPNFQEVLESLWKNGEYLAFAPDTVETKTM

Query:  LDLMSIKFPLLEVHISTY
        L LMS+KFPLLEV    Y
Subjt:  LDLMSIKFPLLEVHISTY

A0A5A7UJN7 ABC transporter A family member 1 isoform X7

8.5e-50

88.14

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Query:  MGTAWRQLKAMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIRKGMFVEVGKGISPNFQEVLESLWKNGEYLAFAPDTVETKTM
        M  AWRQLK MLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHI+KGMFVEVGKGISP+FQEVL SL KNGEYLAFAPDTVETKTM
Subjt:  MGTAWRQLKAMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIRKGMFVEVGKGISPNFQEVLESLWKNGEYLAFAPDTVETKTM

Query:  LDLMSIKFPLLEVHISTY
        L LMS+KFP+LEV    Y
Subjt:  LDLMSIKFPLLEVHISTY

A0A5D3CGH2 ABC transporter A family member 1 isoform X7

5.0e-50

88.98

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Query:  MGTAWRQLKAMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIRKGMFVEVGKGISPNFQEVLESLWKNGEYLAFAPDTVETKTM
        M  AWRQLK MLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHI+KGMFVEVGKGISP+FQEVL SL KNGEYLAFAPDTVETKTM
Subjt:  MGTAWRQLKAMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIRKGMFVEVGKGISPNFQEVLESLWKNGEYLAFAPDTVETKTM

Query:  LDLMSIKFPLLEVHISTY
        L LMS+KFPLLEV    Y
Subjt:  LDLMSIKFPLLEVHISTY

A0A6J1EKF6 ABC transporter A family member 1 isoform X1

2.9e-50

88.98

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Query:  MGTAWRQLKAMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIRKGMFVEVGKGISPNFQEVLESLWKNGEYLAFAPDTVETKTM
        M TAWRQLKAMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIRKGMFVEVGKGISP+FQEVL+SL KN EYLAFAPDTVETK M
Subjt:  MGTAWRQLKAMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIRKGMFVEVGKGISPNFQEVLESLWKNGEYLAFAPDTVETKTM

Query:  LDLMSIKFPLLEVHISTY
        L +MSIKFPL+EV    Y
Subjt:  LDLMSIKFPLLEVHISTY

A0A6J1HV62 ABC transporter A family member 1

6.5e-50

88.14

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Query:  MGTAWRQLKAMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIRKGMFVEVGKGISPNFQEVLESLWKNGEYLAFAPDTVETKTM
        M TAWRQLKAMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIRKGMFVEVGKGISP+FQEVL+SL KN EYLAF PDTVETK M
Subjt:  MGTAWRQLKAMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIRKGMFVEVGKGISPNFQEVLESLWKNGEYLAFAPDTVETKTM

Query:  LDLMSIKFPLLEVHISTY
        L +MSIKFPL+EV    Y
Subjt:  LDLMSIKFPLLEVHISTY

SwissProt top hits

e value

%identity

Alignment

Q84M24 ABC transporter A family member 1

6.7e-36

60.94

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Query:  MGTAWRQLKAMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIRKGMFVEVGKGISPNFQEVLESLWKNGEYLAFAPDTVETKTM
        MG++ RQ KAMLRKNWLLK RHPF+TSAEILLPT+VMLLLIAVRT+VD T+HP   +I K   VEVGKG SP+F EVL+ L   G++LAFAPDT ET  M
Subjt:  MGTAWRQLKAMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIRKGMFVEVGKGISPNFQEVLESLWKNGEYLAFAPDTVETKTM

Query:  LDLMSIKFPLL---------EVHISTYI
        +D++S+KFP L         ++ + TYI
Subjt:  LDLMSIKFPLL---------EVHISTYI

Arabidopsis top hits

e value

%identity

Alignment

AT2G41700.1 ATP-binding cassette A1

4.8e-37

60.94

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Query:  MGTAWRQLKAMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIRKGMFVEVGKGISPNFQEVLESLWKNGEYLAFAPDTVETKTM
        MG++ RQ KAMLRKNWLLK RHPF+TSAEILLPT+VMLLLIAVRT+VD T+HP   +I K   VEVGKG SP+F EVL+ L   G++LAFAPDT ET  M
Subjt:  MGTAWRQLKAMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIRKGMFVEVGKGISPNFQEVLESLWKNGEYLAFAPDTVETKTM

Query:  LDLMSIKFPLL---------EVHISTYI
        +D++S+KFP L         ++ + TYI
Subjt:  LDLMSIKFPLL---------EVHISTYI

AT2G41700.2 ATP-binding cassette A1

5.1e-23

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Query:  EILLPTVVMLLLIAVRTQVDNTVHPPQPHIRKGMFVEVGKGISPNFQEVLESLWKNGEYLAFAPDTVETKTMLDLMSIKFPLL---------EVHISTYI
        +ILLPT+VMLLLIAVRT+VD T+HP   +I K   VEVGKG SP+F EVL+ L   G++LAFAPDT ET  M+D++S+KFP L         ++ + TYI
Subjt:  EILLPTVVMLLLIAVRTQVDNTVHPPQPHIRKGMFVEVGKGISPNFQEVLESLWKNGEYLAFAPDTVETKTMLDLMSIKFPLL---------EVHISTYI

Sequences

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CDS sequence

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ATGGGAACTGCATGGAGGCAGCTCAAGGCTATGCTCCGCAAGAACTGGCTCCTCAAAATTCGCCATCCTTTCATCACCTCCGCAGAGATTTTACTTCCGACAGTGGTGAT
GTTGTTACTGATAGCCGTGAGGACGCAAGTGGATAACACAGTTCATCCTCCGCAACCGCATATACGGAAAGGAATGTTTGTAGAAGTTGGCAAAGGTATATCCCCGAATT
TCCAGGAAGTTCTGGAGTCACTATGGAAAAATGGAGAATATTTGGCTTTTGCACCAGATACAGTCGAGACAAAGACCATGCTAGATTTGATGTCAATAAAATTTCCTCTT
TTAGAGGTACATATCAGTACCTACATTGCAATTTAA

mRNA sequence

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Protein sequence

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MGTAWRQLKAMLRKNWLLKIRHPFITSAEILLPTVVMLLLIAVRTQVDNTVHPPQPHIRKGMFVEVGKGISPNFQEVLESLWKNGEYLAFAPDTVETKTMLDLMSIKFPL
LEVHISTYIAI

Spg020149 (gene) of Sponge gourd (cylindrica) v1 genome