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Spg020160 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020160
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPhospho-2-dehydro-3-deoxyheptonate aldolase
Genome locationscaffold1:23083740..23094512
RNA-Seq ExpressionSpg020160
SyntenySpg020160
Gene Ontology termsGO:0008652 - cellular amino acid biosynthetic process (biological process)
GO:0009073 - aromatic amino acid family biosynthetic process (biological process)
GO:0009423 - chorismate biosynthetic process (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity (molecular function)
InterPro domainsIPR002480 - DAHP synthetase, class II


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055844.1 phospho-2-dehydro-3-deoxyheptonate aldolase 2 [Cucumis melo var. makuwa]2.2e-2188.71Show/hide
Query:  VEITSFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR
        +   +FDEKSRTP PQRLVRAYLQ VGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR
Subjt:  VEITSFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR

KAG6596890.1 hypothetical protein SDJN03_10070, partial [Cucurbita argyrosperma subsp. sororia]2.2e-2188.71Show/hide
Query:  VEITSFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR
        +   +FDEKSRTP PQRLVRAYLQ VGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR
Subjt:  VEITSFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR

KAG7030166.1 hypothetical protein SDJN02_08513 [Cucurbita argyrosperma subsp. argyrosperma]7.7e-2287.5Show/hide
Query:  VEITSFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDRSN
        +   +FDEKSRTP PQRLVRAYLQ VGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR N
Subjt:  VEITSFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDRSN

XP_022946592.1 phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic-like [Cucurbita moschata]2.2e-2188.71Show/hide
Query:  VEITSFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR
        +   +FDEKSRTP PQRLVRAYLQ VGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR
Subjt:  VEITSFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR

XP_023539709.1 phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic-like [Cucurbita pepo subsp. pepo]2.2e-2188.71Show/hide
Query:  VEITSFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR
        +   +FDEKSRTP PQRLVRAYLQ VGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR
Subjt:  VEITSFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR

TrEMBL top hitse value%identityAlignment
A0A0A0L679 Phospho-2-dehydro-3-deoxyheptonate aldolase1.1e-2188.71Show/hide
Query:  VEITSFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR
        +   +FDEKSRTP PQRLVRAYLQ VGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR
Subjt:  VEITSFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR

A0A1S3BKR2 Phospho-2-dehydro-3-deoxyheptonate aldolase1.1e-2188.71Show/hide
Query:  VEITSFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR
        +   +FDEKSRTP PQRLVRAYLQ VGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR
Subjt:  VEITSFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR

A0A5A7UKY4 Phospho-2-dehydro-3-deoxyheptonate aldolase1.1e-2188.71Show/hide
Query:  VEITSFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR
        +   +FDEKSRTP PQRLVRAYLQ VGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR
Subjt:  VEITSFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR

A0A6J1G449 Phospho-2-dehydro-3-deoxyheptonate aldolase1.1e-2188.71Show/hide
Query:  VEITSFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR
        +   +FDEKSRTP PQRLVRAYLQ VGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR
Subjt:  VEITSFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR

A0A6J1L209 Phospho-2-dehydro-3-deoxyheptonate aldolase1.4e-2187.1Show/hide
Query:  VEITSFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR
        +   +FDEKSRTP PQRL+RAYLQ VGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR
Subjt:  VEITSFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR

SwissProt top hitse value%identityAlignment
A0A067XH53 Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic3.3e-2081.03Show/hide
Query:  SFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR
        +FD KSRTP PQRL+RAY Q   TLNLLRAFATGGYAAMQRV+QWNLDF +HSEQGDR
Subjt:  SFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR

P21357 Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic3.3e-2079.31Show/hide
Query:  SFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR
        +FD KSRTP PQRL+RAY Q   TLNLLRAFATGGYAAMQR++QWNLDF +HSEQGDR
Subjt:  SFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR

P27608 Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic2.6e-2079.31Show/hide
Query:  SFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR
        +FD KSRTP PQRL+RAY Q   TLNLLRAFATGGYAAMQR++QWNLDF +HSEQGDR
Subjt:  SFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR

Q00218 Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic6.7e-2184.48Show/hide
Query:  SFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR
        +FDEKSR P P R+VRAY Q V TLNLLRAFATGGYAAMQRVSQWNLDF QHSEQGDR
Subjt:  SFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR

Q75W16 Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic2.3e-2164.1Show/hide
Query:  SFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDRSNSQHGHDRSERTRLLNSCG
        +FDEKSR P PQR++RAY Q V TLNLLRAFATGGYAAMQRV+QWNLDF+ HSEQGDR   +  H   E    + + G
Subjt:  SFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDRSNSQHGHDRSERTRLLNSCG

Arabidopsis top hitse value%identityAlignment
AT1G22410.1 Class-II DAHP synthetase family protein7.6e-2075.86Show/hide
Query:  SFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR
        +FD KSR P PQR++RAY Q   TLNLLRAFATGGYAAMQRV+QWNLDF + SEQGDR
Subjt:  SFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR

AT4G33510.1 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase4.8e-2284.48Show/hide
Query:  SFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR
        +FDEKSR P P R+VRAY Q V TLNLLRAFATGGYAAMQRVSQWNLDF QHSEQGDR
Subjt:  SFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR

AT4G33510.2 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase4.8e-2284.48Show/hide
Query:  SFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR
        +FDEKSR P P R+VRAY Q V TLNLLRAFATGGYAAMQRVSQWNLDF QHSEQGDR
Subjt:  SFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDR

AT4G39980.1 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 15.0e-1958.97Show/hide
Query:  SFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDRSNSQHGHDRSERTRLLNSCG
        +FDEKSR P P R++RAY Q   TLNLLRAFATGGYAA+QRV+QWNLDFV+ SEQ DR   +  +   E    +++CG
Subjt:  SFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDRSNSQHGHDRSERTRLLNSCG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGACATCCGAGATCCGCGAACTTCCCCAACTCAGATCTGGAAGTTTCGAGACCCACGAATCGGTGATGAGACCCACGACGTCAGACGAACTTCCCAACTAAGATC
TGGAAGTTTCGAATTTTCGGCGAGTTCCCTTCTTCCCGGTGAGATATGCGAACACAACCGAACTACCTACGAACCAGTGAGCACGCGAACAAGCAAATCCGCATCAGATT
TGAAACATATGAAACCTTGGAGAAAAGAGGAGAACGACGGTGGTTGGAACATGAATGCCAGATCAGATTCAGTGGGCAGTGGCGGCGCGAAGAGCTTTCCCCAACGGCGG
AGCCGAAATCGGAAGAGCTCCGTTGCCGGATTCGAAGGGGGGGTTTCCCTTTTGGAAGAATGGCAGGACAATTTGCTAAACCCAGGTCAGATCCGTTTGAGGTTAAAGAT
GGTGTACAGCGACCGAGTTATCGTGGAGATAACATCTTTCGATGAGAAATCTCGAACCCCGGGTCCTCAAAGATTAGTTAGAGCATATCTCCAACCTGTAGGTACATTGA
ACCTTCTTAGAGCATTTGCCACTGGAGGATACGCTGCAATGCAGAGAGTTTCTCAATGGAATCTTGACTTCGTTCAACACAGTGAGCAAGGAGACAGGAGCAACAGTCAG
CATGGCCACGACAGAAGTGAGAGGACTCGACTGTTGAATTCCTGCGGGGCGTGTCTAATCCTCTTGGCATTAAGTATTGTGCTTGAATGTGTTAGGGAGCATGGTGCCCT
GTTGCTTTTGAAGGTTTTCTTTTGTGAAAGTGGATGTTTCTCTCTTAATAAAGTTGTGGTTTTGGATGTTGTTTCAACATTAGATACAGTAATTCTGCAGCCAAAGTTCA
GCCGCCGCGGTCACCCTCCATCGACGGAGAAGTCGTTGCCTAGCCGTTCGTCACAGCCCGAACACGCCGCAGCCGTCCGCGCATCTCTCTCTTCGCGCGTGCCTCCCCCT
TTTTTTCCTCTCGGCCGTGTAACCCAGCCCTTGTCGAAGTGCATCGTCGCCGCCAGCCCGTCCAACCGCTGTCGATCAGCCAACCTTCAATCCCGTCGGGCAGCACTCAC
GCGAAGGCTCCTCCGTTCTCATCTCTCCGGCGCGCAGCAAGGTAGACCCGAGCCTCGCGATTTCCTCCCTCTCTCGCTGCAAGTAGCTCGTGTTTTCGTCTCCCTCTCTC
TGGATTCCGTGGGTCAGCGTGTGGGTTCGCGTGAAACCCACGATAGTTCGCGATTTTTAGCGGGCAAGCAGGGGTTTTGGTGCGTTTTCTTCCCCCCTTCGGCTTCAGTC
CGTGAGTTTCAGCCGATCCTTCTTCTCTTTAGCGTGTTGGAACTAATTTTGTTCCTGGCCGTCGATCTAGCTTGCAGGCTTGAATCCAAGTTTGGTTTCGGGCTTTTGGA
TTATTCTAGTAGCGATATAGGAACTAATGGAAACTTAACTGAGAAAAAGTTTAAGTTGGAAACTGTGGATTGGGATGATATAGAATTTGAACCAGTAGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGACATCCGAGATCCGCGAACTTCCCCAACTCAGATCTGGAAGTTTCGAGACCCACGAATCGGTGATGAGACCCACGACGTCAGACGAACTTCCCAACTAAGATC
TGGAAGTTTCGAATTTTCGGCGAGTTCCCTTCTTCCCGGTGAGATATGCGAACACAACCGAACTACCTACGAACCAGTGAGCACGCGAACAAGCAAATCCGCATCAGATT
TGAAACATATGAAACCTTGGAGAAAAGAGGAGAACGACGGTGGTTGGAACATGAATGCCAGATCAGATTCAGTGGGCAGTGGCGGCGCGAAGAGCTTTCCCCAACGGCGG
AGCCGAAATCGGAAGAGCTCCGTTGCCGGATTCGAAGGGGGGGTTTCCCTTTTGGAAGAATGGCAGGACAATTTGCTAAACCCAGGTCAGATCCGTTTGAGGTTAAAGAT
GGTGTACAGCGACCGAGTTATCGTGGAGATAACATCTTTCGATGAGAAATCTCGAACCCCGGGTCCTCAAAGATTAGTTAGAGCATATCTCCAACCTGTAGGTACATTGA
ACCTTCTTAGAGCATTTGCCACTGGAGGATACGCTGCAATGCAGAGAGTTTCTCAATGGAATCTTGACTTCGTTCAACACAGTGAGCAAGGAGACAGGAGCAACAGTCAG
CATGGCCACGACAGAAGTGAGAGGACTCGACTGTTGAATTCCTGCGGGGCGTGTCTAATCCTCTTGGCATTAAGTATTGTGCTTGAATGTGTTAGGGAGCATGGTGCCCT
GTTGCTTTTGAAGGTTTTCTTTTGTGAAAGTGGATGTTTCTCTCTTAATAAAGTTGTGGTTTTGGATGTTGTTTCAACATTAGATACAGTAATTCTGCAGCCAAAGTTCA
GCCGCCGCGGTCACCCTCCATCGACGGAGAAGTCGTTGCCTAGCCGTTCGTCACAGCCCGAACACGCCGCAGCCGTCCGCGCATCTCTCTCTTCGCGCGTGCCTCCCCCT
TTTTTTCCTCTCGGCCGTGTAACCCAGCCCTTGTCGAAGTGCATCGTCGCCGCCAGCCCGTCCAACCGCTGTCGATCAGCCAACCTTCAATCCCGTCGGGCAGCACTCAC
GCGAAGGCTCCTCCGTTCTCATCTCTCCGGCGCGCAGCAAGGTAGACCCGAGCCTCGCGATTTCCTCCCTCTCTCGCTGCAAGTAGCTCGTGTTTTCGTCTCCCTCTCTC
TGGATTCCGTGGGTCAGCGTGTGGGTTCGCGTGAAACCCACGATAGTTCGCGATTTTTAGCGGGCAAGCAGGGGTTTTGGTGCGTTTTCTTCCCCCCTTCGGCTTCAGTC
CGTGAGTTTCAGCCGATCCTTCTTCTCTTTAGCGTGTTGGAACTAATTTTGTTCCTGGCCGTCGATCTAGCTTGCAGGCTTGAATCCAAGTTTGGTTTCGGGCTTTTGGA
TTATTCTAGTAGCGATATAGGAACTAATGGAAACTTAACTGAGAAAAAGTTTAAGTTGGAAACTGTGGATTGGGATGATATAGAATTTGAACCAGTAGAATAA
Protein sequenceShow/hide protein sequence
MSDIRDPRTSPTQIWKFRDPRIGDETHDVRRTSQLRSGSFEFSASSLLPGEICEHNRTTYEPVSTRTSKSASDLKHMKPWRKEENDGGWNMNARSDSVGSGGAKSFPQRR
SRNRKSSVAGFEGGVSLLEEWQDNLLNPGQIRLRLKMVYSDRVIVEITSFDEKSRTPGPQRLVRAYLQPVGTLNLLRAFATGGYAAMQRVSQWNLDFVQHSEQGDRSNSQ
HGHDRSERTRLLNSCGACLILLALSIVLECVREHGALLLLKVFFCESGCFSLNKVVVLDVVSTLDTVILQPKFSRRGHPPSTEKSLPSRSSQPEHAAAVRASLSSRVPPP
FFPLGRVTQPLSKCIVAASPSNRCRSANLQSRRAALTRRLLRSHLSGAQQGRPEPRDFLPLSLQVARVFVSLSLDSVGQRVGSRETHDSSRFLAGKQGFWCVFFPPSASV
REFQPILLLFSVLELILFLAVDLACRLESKFGFGLLDYSSSDIGTNGNLTEKKFKLETVDWDDIEFEPVE