; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg020169 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020169
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionEnzymatic polyprotein
Genome locationscaffold1:24969776..24973793
RNA-Seq ExpressionSpg020169
SyntenySpg020169
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037024.1 polyprotein [Cucumis melo var. makuwa]2.9e-4255.49Show/hide
Query:  ANRCPLVRKINNMEIDEDTKQSLLRILSSNDQSSEEESSS---EKDFINEIVEESSEDYSSSRGESDEDDAIPCVGCINVLTTHQKNLLDLIDEIPDQEA
        ANRCP+VRKIN MEIDED KQSL +++ + + SSEEE  S   E+D +N ++EESSE+ SSS  E+D ++AI   GCINVLT+ QK LLD+I+E+ D+  
Subjt:  ANRCPLVRKINNMEIDEDTKQSLLRILSSNDQSSEEESSS---EKDFINEIVEESSEDYSSSRGESDEDDAIPCVGCINVLTTHQKNLLDLIDEIPDQEA

Query:  RKKMLLKLREELEAPEQTYKDPLNFSYHHVLNQLKEEQTTLVKVSDLQYEIKTLKREVAENRQRLSDLESAYVAIQESIAAK
        RKK+LL+LRE+LE P+Q +KDP+NFS+  V+N L +E    VKV DL +EI+ LK+E+ EN+Q++S L++A VAIQE I +K
Subjt:  RKKMLLKLREELEAPEQTYKDPLNFSYHHVLNQLKEEQTTLVKVSDLQYEIKTLKREVAENRQRLSDLESAYVAIQESIAAK

KAA0050194.1 polyprotein [Cucumis melo var. makuwa]1.7e-3448.39Show/hide
Query:  DTKQSLLRILSSNDQSSEEE---SSSEKDFINEIVEESSEDYSSSRGESDEDDAIPCVGCINVLTTHQKNLLDLIDEIPDQEARKKMLLKLREELEAPEQ
        +T  S  +++ + + SSEEE   S  E+D +N ++EESS+++SSS  E+D  +AIPC GCINVLT+ Q+ LLD+I+E+ D+  RK +LL+LRE+LE P+Q
Subjt:  DTKQSLLRILSSNDQSSEEE---SSSEKDFINEIVEESSEDYSSSRGESDEDDAIPCVGCINVLTTHQKNLLDLIDEIPDQEARKKMLLKLREELEAPEQ

Query:  TYKDPLNFSYHHVLNQLKEEQTTLVKVSDLQYEIKTLKREVAENRQRLSDLESAYVAIQESIAAKIILPPQPNPQITNSSGASSSR
         +KDP+NFS+  V+N L +E    VKV+DLQ+EIK LK+E+ ENRQ++S LE+A V IQE I +K  +  Q   Q     G  SS+
Subjt:  TYKDPLNFSYHHVLNQLKEEQTTLVKVSDLQYEIKTLKREVAENRQRLSDLESAYVAIQESIAAKIILPPQPNPQITNSSGASSSR

KAA0050625.1 Enzymatic polyprotein [Cucumis melo var. makuwa]1.8e-4455.68Show/hide
Query:  ANRCPLVRKINNMEIDEDTKQSLLRILSSNDQSSEEE---SSSEKDFINEIVEESSEDYSSSRGESDEDDAIPCVGCINVLTTHQKNLLDLIDEIPDQEA
        ANRCP+V+KIN MEIDED KQSLL+++ + + SSEE+   S  E+D +N ++EESSE+ SSS+ E+D ++ I C GCI+VLT+ QK LLD+I+E+ D+  
Subjt:  ANRCPLVRKINNMEIDEDTKQSLLRILSSNDQSSEEE---SSSEKDFINEIVEESSEDYSSSRGESDEDDAIPCVGCINVLTTHQKNLLDLIDEIPDQEA

Query:  RKKMLLKLREELEAPEQTYKDPLNFSYHHVLNQLKEEQTTLVKVSDLQYEIKTLKREVAENRQRLSDLESAYVAIQESIAAKIIL
        RK +LL+LRE+LE P+Q +KDP+NFS+ +V+N L +E    VKV+DLQ+EIK LK EV EN+Q++S LE+A VAIQE I +K +L
Subjt:  RKKMLLKLREELEAPEQTYKDPLNFSYHHVLNQLKEEQTTLVKVSDLQYEIKTLKREVAENRQRLSDLESAYVAIQESIAAKIIL

KAA0059217.1 Enzymatic polyprotein [Cucumis melo var. makuwa]6.5e-3450.78Show/hide
Query:  ANRCPLVRKINNMEIDEDTKQSLL-RILSSNDQSSEEESSSEKDFINEIVEE---SSEDYSSSRGESDEDDAIPCVG-----C---INVLTTHQKNLLDL
        ANRCPL  KIN M IDE+TKQSLL  I S +D +S+ ESSSE+D+IN + EE   S E++ S    SD++ AIPC G     C   INV+T  Q+ L DL
Subjt:  ANRCPLVRKINNMEIDEDTKQSLL-RILSSNDQSSEEESSSEKDFINEIVEE---SSEDYSSSRGESDEDDAIPCVG-----C---INVLTTHQKNLLDL

Query:  IDEIPDQEARKKMLLKLREELE--APEQTYKDPLNFSYHHVLNQLKEEQTTLVKVSDLQYEIKTLKREVAENRQRLSDLESAYVAIQESIAAK
        I++IPD+EA++  LLKL++ LE  AP++  ++P+ +SY  +LN++K E    ++V DL +E+KTLKREVAEN+QRL  LE+A+ A Q S A+K
Subjt:  IDEIPDQEARKKMLLKLREELE--APEQTYKDPLNFSYHHVLNQLKEEQTTLVKVSDLQYEIKTLKREVAENRQRLSDLESAYVAIQESIAAK

TYJ98215.1 polyprotein [Cucumis melo var. makuwa]1.7e-3448.39Show/hide
Query:  DTKQSLLRILSSNDQSSEEE---SSSEKDFINEIVEESSEDYSSSRGESDEDDAIPCVGCINVLTTHQKNLLDLIDEIPDQEARKKMLLKLREELEAPEQ
        +T  S  +++ + + SSEEE   S  E+D +N ++EESS+++SSS  E+D  +AIPC GCINVLT+ Q+ LLD+I+E+ D+  RK +LL+LRE+LE P+Q
Subjt:  DTKQSLLRILSSNDQSSEEE---SSSEKDFINEIVEESSEDYSSSRGESDEDDAIPCVGCINVLTTHQKNLLDLIDEIPDQEARKKMLLKLREELEAPEQ

Query:  TYKDPLNFSYHHVLNQLKEEQTTLVKVSDLQYEIKTLKREVAENRQRLSDLESAYVAIQESIAAKIILPPQPNPQITNSSGASSSR
         +KDP+NFS+  V+N L +E    VKV+DLQ+EIK LK+E+ ENRQ++S LE+A V IQE I +K  +  Q   Q     G  SS+
Subjt:  TYKDPLNFSYHHVLNQLKEEQTTLVKVSDLQYEIKTLKREVAENRQRLSDLESAYVAIQESIAAKIILPPQPNPQITNSSGASSSR

TrEMBL top hitse value%identityAlignment
A0A5A7U4M8 Polyprotein8.2e-3548.39Show/hide
Query:  DTKQSLLRILSSNDQSSEEE---SSSEKDFINEIVEESSEDYSSSRGESDEDDAIPCVGCINVLTTHQKNLLDLIDEIPDQEARKKMLLKLREELEAPEQ
        +T  S  +++ + + SSEEE   S  E+D +N ++EESS+++SSS  E+D  +AIPC GCINVLT+ Q+ LLD+I+E+ D+  RK +LL+LRE+LE P+Q
Subjt:  DTKQSLLRILSSNDQSSEEE---SSSEKDFINEIVEESSEDYSSSRGESDEDDAIPCVGCINVLTTHQKNLLDLIDEIPDQEARKKMLLKLREELEAPEQ

Query:  TYKDPLNFSYHHVLNQLKEEQTTLVKVSDLQYEIKTLKREVAENRQRLSDLESAYVAIQESIAAKIILPPQPNPQITNSSGASSSR
         +KDP+NFS+  V+N L +E    VKV+DLQ+EIK LK+E+ ENRQ++S LE+A V IQE I +K  +  Q   Q     G  SS+
Subjt:  TYKDPLNFSYHHVLNQLKEEQTTLVKVSDLQYEIKTLKREVAENRQRLSDLESAYVAIQESIAAKIILPPQPNPQITNSSGASSSR

A0A5A7UAJ7 Enzymatic polyprotein8.8e-4555.68Show/hide
Query:  ANRCPLVRKINNMEIDEDTKQSLLRILSSNDQSSEEE---SSSEKDFINEIVEESSEDYSSSRGESDEDDAIPCVGCINVLTTHQKNLLDLIDEIPDQEA
        ANRCP+V+KIN MEIDED KQSLL+++ + + SSEE+   S  E+D +N ++EESSE+ SSS+ E+D ++ I C GCI+VLT+ QK LLD+I+E+ D+  
Subjt:  ANRCPLVRKINNMEIDEDTKQSLLRILSSNDQSSEEE---SSSEKDFINEIVEESSEDYSSSRGESDEDDAIPCVGCINVLTTHQKNLLDLIDEIPDQEA

Query:  RKKMLLKLREELEAPEQTYKDPLNFSYHHVLNQLKEEQTTLVKVSDLQYEIKTLKREVAENRQRLSDLESAYVAIQESIAAKIIL
        RK +LL+LRE+LE P+Q +KDP+NFS+ +V+N L +E    VKV+DLQ+EIK LK EV EN+Q++S LE+A VAIQE I +K +L
Subjt:  RKKMLLKLREELEAPEQTYKDPLNFSYHHVLNQLKEEQTTLVKVSDLQYEIKTLKREVAENRQRLSDLESAYVAIQESIAAKIIL

A0A5D3BEY3 Enzymatic polyprotein3.1e-3450.78Show/hide
Query:  ANRCPLVRKINNMEIDEDTKQSLL-RILSSNDQSSEEESSSEKDFINEIVEE---SSEDYSSSRGESDEDDAIPCVG-----C---INVLTTHQKNLLDL
        ANRCPL  KIN M IDE+TKQSLL  I S +D +S+ ESSSE+D+IN + EE   S E++ S    SD++ AIPC G     C   INV+T  Q+ L DL
Subjt:  ANRCPLVRKINNMEIDEDTKQSLL-RILSSNDQSSEEESSSEKDFINEIVEE---SSEDYSSSRGESDEDDAIPCVG-----C---INVLTTHQKNLLDL

Query:  IDEIPDQEARKKMLLKLREELE--APEQTYKDPLNFSYHHVLNQLKEEQTTLVKVSDLQYEIKTLKREVAENRQRLSDLESAYVAIQESIAAK
        I++IPD+EA++  LLKL++ LE  AP++  ++P+ +SY  +LN++K E    ++V DL +E+KTLKREVAEN+QRL  LE+A+ A Q S A+K
Subjt:  IDEIPDQEARKKMLLKLREELE--APEQTYKDPLNFSYHHVLNQLKEEQTTLVKVSDLQYEIKTLKREVAENRQRLSDLESAYVAIQESIAAK

A0A5D3BI97 Polyprotein8.2e-3548.39Show/hide
Query:  DTKQSLLRILSSNDQSSEEE---SSSEKDFINEIVEESSEDYSSSRGESDEDDAIPCVGCINVLTTHQKNLLDLIDEIPDQEARKKMLLKLREELEAPEQ
        +T  S  +++ + + SSEEE   S  E+D +N ++EESS+++SSS  E+D  +AIPC GCINVLT+ Q+ LLD+I+E+ D+  RK +LL+LRE+LE P+Q
Subjt:  DTKQSLLRILSSNDQSSEEE---SSSEKDFINEIVEESSEDYSSSRGESDEDDAIPCVGCINVLTTHQKNLLDLIDEIPDQEARKKMLLKLREELEAPEQ

Query:  TYKDPLNFSYHHVLNQLKEEQTTLVKVSDLQYEIKTLKREVAENRQRLSDLESAYVAIQESIAAKIILPPQPNPQITNSSGASSSR
         +KDP+NFS+  V+N L +E    VKV+DLQ+EIK LK+E+ ENRQ++S LE+A V IQE I +K  +  Q   Q     G  SS+
Subjt:  TYKDPLNFSYHHVLNQLKEEQTTLVKVSDLQYEIKTLKREVAENRQRLSDLESAYVAIQESIAAKIILPPQPNPQITNSSGASSSR

A0A5D3C457 Polyprotein1.4e-4255.49Show/hide
Query:  ANRCPLVRKINNMEIDEDTKQSLLRILSSNDQSSEEESSS---EKDFINEIVEESSEDYSSSRGESDEDDAIPCVGCINVLTTHQKNLLDLIDEIPDQEA
        ANRCP+VRKIN MEIDED KQSL +++ + + SSEEE  S   E+D +N ++EESSE+ SSS  E+D ++AI   GCINVLT+ QK LLD+I+E+ D+  
Subjt:  ANRCPLVRKINNMEIDEDTKQSLLRILSSNDQSSEEESSS---EKDFINEIVEESSEDYSSSRGESDEDDAIPCVGCINVLTTHQKNLLDLIDEIPDQEA

Query:  RKKMLLKLREELEAPEQTYKDPLNFSYHHVLNQLKEEQTTLVKVSDLQYEIKTLKREVAENRQRLSDLESAYVAIQESIAAK
        RKK+LL+LRE+LE P+Q +KDP+NFS+  V+N L +E    VKV DL +EI+ LK+E+ EN+Q++S L++A VAIQE I +K
Subjt:  RKKMLLKLREELEAPEQTYKDPLNFSYHHVLNQLKEEQTTLVKVSDLQYEIKTLKREVAENRQRLSDLESAYVAIQESIAAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCCACGTCATCATGGTGTCACGTGTCATTGCCAACAGATGCCCTCTTGTTAGGAAGATCAACAATATGGAAATCGATGAAGACACAAAGCAATCTCTTCTTCGAAT
CCTTAGTTCAAATGATCAGTCTTCAGAAGAAGAATCTTCTTCTGAGAAAGATTTTATCAATGAGATAGTTGAAGAATCCTCTGAAGATTATTCATCATCCAGAGGCGAGT
CAGACGAGGATGATGCCATTCCTTGTGTAGGATGCATCAACGTCTTAACAACACATCAAAAGAACCTCTTGGATCTTATTGATGAAATACCAGATCAAGAAGCCAGGAAG
AAAATGCTTTTAAAGCTCCGTGAAGAGCTTGAAGCTCCTGAGCAGACATACAAAGATCCTTTAAACTTCAGCTATCACCATGTGCTGAATCAATTAAAGGAAGAACAGAC
TACTCTAGTCAAGGTTTCTGATCTTCAATATGAAATCAAGACCTTGAAAAGAGAAGTTGCTGAAAACAGGCAACGCCTCTCTGATCTTGAGTCTGCTTATGTAGCAATTC
AAGAATCAATTGCAGCAAAGATCATTCTGCCTCCGCAGCCAAACCCTCAAATAACTAATTCCTCCGGAGCTAGTTCCTCTAGGGGCAAACGCCCTATGTCTGCACCATCC
CCCATGACTGCAGACAACTACGCCATGGATCTCAGTTATGAAACTGTATCCATAAGGCGTCAAGGCTCCTCTCCAAGGGCCTTATCAATTAGATCGGATGCGAGTCTTCC
ACCGCAGCCATCTACCACTTTGTTACGTCCTTCCGGCGTATCAAATCCAAATGTCCGACCTCCTGGACCTTCCAATATATGGTTCAAGGCAAATGCGCATCTATTTCGCG
AAGAAGAAGATCAATTTCTTCTCGCAAAAAATTCAATCATGACATCCTTGGTCGGAGCAGCCTCAGAATTCGACCTCCAAGCTGTCATTCAAAATGTCGTTCAGACCATC
TCTGATAATGACGACATCCAAGAAGAAAATCCTGAAGCCGAAAATGCAGCTTCAGAATCTTCTGTCAACGATATCGAAGACGAATATGATCCATATTTGAACTTCGATCC
TCTTGATCCTTACTATGATTCCCAGCCAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCCACGTCATCATGGTGTCACGTGTCATTGCCAACAGATGCCCTCTTGTTAGGAAGATCAACAATATGGAAATCGATGAAGACACAAAGCAATCTCTTCTTCGAAT
CCTTAGTTCAAATGATCAGTCTTCAGAAGAAGAATCTTCTTCTGAGAAAGATTTTATCAATGAGATAGTTGAAGAATCCTCTGAAGATTATTCATCATCCAGAGGCGAGT
CAGACGAGGATGATGCCATTCCTTGTGTAGGATGCATCAACGTCTTAACAACACATCAAAAGAACCTCTTGGATCTTATTGATGAAATACCAGATCAAGAAGCCAGGAAG
AAAATGCTTTTAAAGCTCCGTGAAGAGCTTGAAGCTCCTGAGCAGACATACAAAGATCCTTTAAACTTCAGCTATCACCATGTGCTGAATCAATTAAAGGAAGAACAGAC
TACTCTAGTCAAGGTTTCTGATCTTCAATATGAAATCAAGACCTTGAAAAGAGAAGTTGCTGAAAACAGGCAACGCCTCTCTGATCTTGAGTCTGCTTATGTAGCAATTC
AAGAATCAATTGCAGCAAAGATCATTCTGCCTCCGCAGCCAAACCCTCAAATAACTAATTCCTCCGGAGCTAGTTCCTCTAGGGGCAAACGCCCTATGTCTGCACCATCC
CCCATGACTGCAGACAACTACGCCATGGATCTCAGTTATGAAACTGTATCCATAAGGCGTCAAGGCTCCTCTCCAAGGGCCTTATCAATTAGATCGGATGCGAGTCTTCC
ACCGCAGCCATCTACCACTTTGTTACGTCCTTCCGGCGTATCAAATCCAAATGTCCGACCTCCTGGACCTTCCAATATATGGTTCAAGGCAAATGCGCATCTATTTCGCG
AAGAAGAAGATCAATTTCTTCTCGCAAAAAATTCAATCATGACATCCTTGGTCGGAGCAGCCTCAGAATTCGACCTCCAAGCTGTCATTCAAAATGTCGTTCAGACCATC
TCTGATAATGACGACATCCAAGAAGAAAATCCTGAAGCCGAAAATGCAGCTTCAGAATCTTCTGTCAACGATATCGAAGACGAATATGATCCATATTTGAACTTCGATCC
TCTTGATCCTTACTATGATTCCCAGCCAGGATGA
Protein sequenceShow/hide protein sequence
MCHVIMVSRVIANRCPLVRKINNMEIDEDTKQSLLRILSSNDQSSEEESSSEKDFINEIVEESSEDYSSSRGESDEDDAIPCVGCINVLTTHQKNLLDLIDEIPDQEARK
KMLLKLREELEAPEQTYKDPLNFSYHHVLNQLKEEQTTLVKVSDLQYEIKTLKREVAENRQRLSDLESAYVAIQESIAAKIILPPQPNPQITNSSGASSSRGKRPMSAPS
PMTADNYAMDLSYETVSIRRQGSSPRALSIRSDASLPPQPSTTLLRPSGVSNPNVRPPGPSNIWFKANAHLFREEEDQFLLAKNSIMTSLVGAASEFDLQAVIQNVVQTI
SDNDDIQEENPEAENAASESSVNDIEDEYDPYLNFDPLDPYYDSQPG