; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg020191 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020191
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotransposon gag protein
Genome locationscaffold1:27511553..27515698
RNA-Seq ExpressionSpg020191
SyntenySpg020191
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044978.1 retrotransposon gag protein [Cucumis melo var. makuwa]8.5e-3158.7Show/hide
Query:  EIENQNAAESKVDNSKKGEQRTSAFDRIKPPITRPSVFQRMSMAGIEEENQCLVSNSTRPSAFQRLSVSTSKKGRPSTFVFDRLKVTSNQPKRKMNNLEV
        +++N   +  +VDNS + +QRTS FDRIKP  TR SVFQR+SMA  EEENQC  S   R SAF+RLS+STSKK RPST  FDRLK+T++Q +R+M +L+ 
Subjt:  EIENQNAAESKVDNSKKGEQRTSAFDRIKPPITRPSVFQRMSMAGIEEENQCLVSNSTRPSAFQRLSVSTSKKGRPSTFVFDRLKVTSNQPKRKMNNLEV

Query:  KLFDEINNDEKLHSSISSHMKRKLSVLISTEGCLMVWP
        K F E N+D+K+HS + S MKRKLSV I+TEG L V P
Subjt:  KLFDEINNDEKLHSSISSHMKRKLSVLISTEGCLMVWP

KAA0062458.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.8e-3158.7Show/hide
Query:  EIENQNAAESKVDNSKKGEQRTSAFDRIKPPITRPSVFQRMSMAGIEEENQCLVSNSTRPSAFQRLSVSTSKKGRPSTFVFDRLKVTSNQPKRKMNNLEV
        E++N   +  +VD S + ++RTS FDRIKP  TR SVFQR+SMA  EEENQC  S STR SAF+RLS+STSKK RPST VF+RLK+T++Q +R+  +L+ 
Subjt:  EIENQNAAESKVDNSKKGEQRTSAFDRIKPPITRPSVFQRMSMAGIEEENQCLVSNSTRPSAFQRLSVSTSKKGRPSTFVFDRLKVTSNQPKRKMNNLEV

Query:  KLFDEINNDEKLHSSISSHMKRKLSVLISTEGCLMVWP
        K F E N+D+K+HS + SHMKR LSV I+TEG L V P
Subjt:  KLFDEINNDEKLHSSISSHMKRKLSVLISTEGCLMVWP

TYK16519.1 retrotransposon gag protein [Cucumis melo var. makuwa]6.5e-3159.42Show/hide
Query:  EIENQNAAESKVDNSKKGEQRTSAFDRIKPPITRPSVFQRMSMAGIEEENQCLVSNSTRPSAFQRLSVSTSKKGRPSTFVFDRLKVTSNQPKRKMNNLEV
        E++N   +  +VDNS + +QRTS FDRIKP  TR  VFQR+SMA  EEENQC  S   R SAF+RLS+STSKK RPST  FDRLK+T+NQ KR+M + + 
Subjt:  EIENQNAAESKVDNSKKGEQRTSAFDRIKPPITRPSVFQRMSMAGIEEENQCLVSNSTRPSAFQRLSVSTSKKGRPSTFVFDRLKVTSNQPKRKMNNLEV

Query:  KLFDEINNDEKLHSSISSHMKRKLSVLISTEGCLMVWP
        K F E N+D K+HS + S MKRKLSV I+TEG L V P
Subjt:  KLFDEINNDEKLHSSISSHMKRKLSVLISTEGCLMVWP

TYK19591.1 hypothetical protein E5676_scaffold1274G00410 [Cucumis melo var. makuwa]7.7e-3259.09Show/hide
Query:  EIENQNAAESKVDNSKKGEQRTSAFDRIKPPITRPSVFQRMSMAGIEEENQCLVSNSTRPSAFQRLSVSTSKKGRPSTFVFDRLKVTSNQPKRKMNNLEV
        E++N   +  +VDNS K +QRTS FDRIKP  TR  VFQR+SM   EEENQC +S  TR SAF++LS+STSKK +PSTF F+ LK+T+NQ +R+M +L+V
Subjt:  EIENQNAAESKVDNSKKGEQRTSAFDRIKPPITRPSVFQRMSMAGIEEENQCLVSNSTRPSAFQRLSVSTSKKGRPSTFVFDRLKVTSNQPKRKMNNLEV

Query:  KLFDEINNDEKLHSSISSHMKRKLSVLISTEG
        K F E NND+++HS +SS MKRKLSV+I+T+G
Subjt:  KLFDEINNDEKLHSSISSHMKRKLSVLISTEG

TYK27425.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.8e-3158.7Show/hide
Query:  EIENQNAAESKVDNSKKGEQRTSAFDRIKPPITRPSVFQRMSMAGIEEENQCLVSNSTRPSAFQRLSVSTSKKGRPSTFVFDRLKVTSNQPKRKMNNLEV
        E++N   +  +VD S + ++RTS FDRIKP  TR SVFQR+SMA  EEENQC  S STR SAF+RLS+STSKK RPST VF+RLK+T++Q +R+  +L+ 
Subjt:  EIENQNAAESKVDNSKKGEQRTSAFDRIKPPITRPSVFQRMSMAGIEEENQCLVSNSTRPSAFQRLSVSTSKKGRPSTFVFDRLKVTSNQPKRKMNNLEV

Query:  KLFDEINNDEKLHSSISSHMKRKLSVLISTEGCLMVWP
        K F E N+D+K+HS + SHMKR LSV I+TEG L V P
Subjt:  KLFDEINNDEKLHSSISSHMKRKLSVLISTEGCLMVWP

TrEMBL top hitse value%identityAlignment
A0A5A7TQ06 Retrotransposon gag protein4.1e-3158.7Show/hide
Query:  EIENQNAAESKVDNSKKGEQRTSAFDRIKPPITRPSVFQRMSMAGIEEENQCLVSNSTRPSAFQRLSVSTSKKGRPSTFVFDRLKVTSNQPKRKMNNLEV
        +++N   +  +VDNS + +QRTS FDRIKP  TR SVFQR+SMA  EEENQC  S   R SAF+RLS+STSKK RPST  FDRLK+T++Q +R+M +L+ 
Subjt:  EIENQNAAESKVDNSKKGEQRTSAFDRIKPPITRPSVFQRMSMAGIEEENQCLVSNSTRPSAFQRLSVSTSKKGRPSTFVFDRLKVTSNQPKRKMNNLEV

Query:  KLFDEINNDEKLHSSISSHMKRKLSVLISTEGCLMVWP
        K F E N+D+K+HS + S MKRKLSV I+TEG L V P
Subjt:  KLFDEINNDEKLHSSISSHMKRKLSVLISTEGCLMVWP

A0A5A7V4E9 Retrotransposon gag protein1.9e-3158.7Show/hide
Query:  EIENQNAAESKVDNSKKGEQRTSAFDRIKPPITRPSVFQRMSMAGIEEENQCLVSNSTRPSAFQRLSVSTSKKGRPSTFVFDRLKVTSNQPKRKMNNLEV
        E++N   +  +VD S + ++RTS FDRIKP  TR SVFQR+SMA  EEENQC  S STR SAF+RLS+STSKK RPST VF+RLK+T++Q +R+  +L+ 
Subjt:  EIENQNAAESKVDNSKKGEQRTSAFDRIKPPITRPSVFQRMSMAGIEEENQCLVSNSTRPSAFQRLSVSTSKKGRPSTFVFDRLKVTSNQPKRKMNNLEV

Query:  KLFDEINNDEKLHSSISSHMKRKLSVLISTEGCLMVWP
        K F E N+D+K+HS + SHMKR LSV I+TEG L V P
Subjt:  KLFDEINNDEKLHSSISSHMKRKLSVLISTEGCLMVWP

A0A5D3D209 Retrotransposon gag protein3.2e-3159.42Show/hide
Query:  EIENQNAAESKVDNSKKGEQRTSAFDRIKPPITRPSVFQRMSMAGIEEENQCLVSNSTRPSAFQRLSVSTSKKGRPSTFVFDRLKVTSNQPKRKMNNLEV
        E++N   +  +VDNS + +QRTS FDRIKP  TR  VFQR+SMA  EEENQC  S   R SAF+RLS+STSKK RPST  FDRLK+T+NQ KR+M + + 
Subjt:  EIENQNAAESKVDNSKKGEQRTSAFDRIKPPITRPSVFQRMSMAGIEEENQCLVSNSTRPSAFQRLSVSTSKKGRPSTFVFDRLKVTSNQPKRKMNNLEV

Query:  KLFDEINNDEKLHSSISSHMKRKLSVLISTEGCLMVWP
        K F E N+D K+HS + S MKRKLSV I+TEG L V P
Subjt:  KLFDEINNDEKLHSSISSHMKRKLSVLISTEGCLMVWP

A0A5D3D7Q8 Uncharacterized protein3.7e-3259.09Show/hide
Query:  EIENQNAAESKVDNSKKGEQRTSAFDRIKPPITRPSVFQRMSMAGIEEENQCLVSNSTRPSAFQRLSVSTSKKGRPSTFVFDRLKVTSNQPKRKMNNLEV
        E++N   +  +VDNS K +QRTS FDRIKP  TR  VFQR+SM   EEENQC +S  TR SAF++LS+STSKK +PSTF F+ LK+T+NQ +R+M +L+V
Subjt:  EIENQNAAESKVDNSKKGEQRTSAFDRIKPPITRPSVFQRMSMAGIEEENQCLVSNSTRPSAFQRLSVSTSKKGRPSTFVFDRLKVTSNQPKRKMNNLEV

Query:  KLFDEINNDEKLHSSISSHMKRKLSVLISTEG
        K F E NND+++HS +SS MKRKLSV+I+T+G
Subjt:  KLFDEINNDEKLHSSISSHMKRKLSVLISTEG

A0A5D3DVW2 Retrotransposon gag protein1.9e-3158.7Show/hide
Query:  EIENQNAAESKVDNSKKGEQRTSAFDRIKPPITRPSVFQRMSMAGIEEENQCLVSNSTRPSAFQRLSVSTSKKGRPSTFVFDRLKVTSNQPKRKMNNLEV
        E++N   +  +VD S + ++RTS FDRIKP  TR SVFQR+SMA  EEENQC  S STR SAF+RLS+STSKK RPST VF+RLK+T++Q +R+  +L+ 
Subjt:  EIENQNAAESKVDNSKKGEQRTSAFDRIKPPITRPSVFQRMSMAGIEEENQCLVSNSTRPSAFQRLSVSTSKKGRPSTFVFDRLKVTSNQPKRKMNNLEV

Query:  KLFDEINNDEKLHSSISSHMKRKLSVLISTEGCLMVWP
        K F E N+D+K+HS + SHMKR LSV I+TEG L V P
Subjt:  KLFDEINNDEKLHSSISSHMKRKLSVLISTEGCLMVWP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAACTTTTACACAGGTTCTACTACCTATTGTTGCTTCAATGAAATGAGGTTGCAAGAGGATAAAGCTCCTATCATTGCAAGCAATGAAATAACATTGCAGGGGGC
TTGCACTGATGGCAAGTTTGTTGTGAAGTATAATCCATTGTTCGAGCATGATTCTAACGTAGTGACTGTCATGATGACTGAGACAAGGACTATGGAAGAGAGAATGACTG
AGATGCAGAAACATATCAACACCTTGATGAAAACGATTGAAGAAAAAGATTCTCAAATTGAGCACCTTAAGAGCGAGATTGAGAATCAAAATGCCGCTGAATCAAAAGTT
GACAATTCCAAGAAGGGTGAACAAAGGACTTCCGCCTTCGATCGCATCAAGCCTCCAATTACTCGTCCTTCGGTATTCCAAAGAATGAGTATGGCCGGGATAGAAGAAGA
AAATCAATGTTTGGTGTCCAACTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCAAAGAAAGGTCGACCTTCAACATTTGTTTTTGATCGCCTCAAAG
TAACAAGCAATCAACCTAAAAGAAAGATGAACAACTTGGAGGTGAAACTTTTCGATGAAATAAACAATGACGAGAAGCTTCATAGTAGCATCTCATCACATATGAAGAGG
AAGCTTTCTGTTCTCATAAGTACAGAAGGTTGCTTGATGGTTTGGCCTCTAATTCCTTTATCTCCAAGGATGATCGTGCAAGCTGTTGTTCGAGTGTGTCCTTCAACGCT
TTATTTGTCTCAAAGTACAAGTTCAAGCTTTGCTCGTTTCAAGTTACAGTTTGAGCTTTCTTCGCTTCAACTACTTCAAGTTCAAGCTTTCATCGCTTCGAGTACTCTAA
GTTCATGTTCGGGGGCTTCGCTCGTTTCAAGTTCAAGTTCGAGCTTTCCTCACTTCGAGTGCTTTAAGTTCAAGTTCAAGCTTTGCTCGTTACAAGATCAAGCTCGAGCT
TTCATCACTTCAAGTACTCTAAGTTCAAGGCTTCGCTTGGTTTCAGTTACAAGGTTGGAAGCTAAGCAGAGAATGAACACTGAGGGTCACAGCCCTACCTTGTTGGAAGC
TAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCAACTTTTACACAGGTTCTACTACCTATTGTTGCTTCAATGAAATGAGGTTGCAAGAGGATAAAGCTCCTATCATTGCAAGCAATGAAATAACATTGCAGGGGGC
TTGCACTGATGGCAAGTTTGTTGTGAAGTATAATCCATTGTTCGAGCATGATTCTAACGTAGTGACTGTCATGATGACTGAGACAAGGACTATGGAAGAGAGAATGACTG
AGATGCAGAAACATATCAACACCTTGATGAAAACGATTGAAGAAAAAGATTCTCAAATTGAGCACCTTAAGAGCGAGATTGAGAATCAAAATGCCGCTGAATCAAAAGTT
GACAATTCCAAGAAGGGTGAACAAAGGACTTCCGCCTTCGATCGCATCAAGCCTCCAATTACTCGTCCTTCGGTATTCCAAAGAATGAGTATGGCCGGGATAGAAGAAGA
AAATCAATGTTTGGTGTCCAACTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCAAAGAAAGGTCGACCTTCAACATTTGTTTTTGATCGCCTCAAAG
TAACAAGCAATCAACCTAAAAGAAAGATGAACAACTTGGAGGTGAAACTTTTCGATGAAATAAACAATGACGAGAAGCTTCATAGTAGCATCTCATCACATATGAAGAGG
AAGCTTTCTGTTCTCATAAGTACAGAAGGTTGCTTGATGGTTTGGCCTCTAATTCCTTTATCTCCAAGGATGATCGTGCAAGCTGTTGTTCGAGTGTGTCCTTCAACGCT
TTATTTGTCTCAAAGTACAAGTTCAAGCTTTGCTCGTTTCAAGTTACAGTTTGAGCTTTCTTCGCTTCAACTACTTCAAGTTCAAGCTTTCATCGCTTCGAGTACTCTAA
GTTCATGTTCGGGGGCTTCGCTCGTTTCAAGTTCAAGTTCGAGCTTTCCTCACTTCGAGTGCTTTAAGTTCAAGTTCAAGCTTTGCTCGTTACAAGATCAAGCTCGAGCT
TTCATCACTTCAAGTACTCTAAGTTCAAGGCTTCGCTTGGTTTCAGTTACAAGGTTGGAAGCTAAGCAGAGAATGAACACTGAGGGTCACAGCCCTACCTTGTTGGAAGC
TAAGTAG
Protein sequenceShow/hide protein sequence
MSNFYTGSTTYCCFNEMRLQEDKAPIIASNEITLQGACTDGKFVVKYNPLFEHDSNVVTVMMTETRTMEERMTEMQKHINTLMKTIEEKDSQIEHLKSEIENQNAAESKV
DNSKKGEQRTSAFDRIKPPITRPSVFQRMSMAGIEEENQCLVSNSTRPSAFQRLSVSTSKKGRPSTFVFDRLKVTSNQPKRKMNNLEVKLFDEINNDEKLHSSISSHMKR
KLSVLISTEGCLMVWPLIPLSPRMIVQAVVRVCPSTLYLSQSTSSSFARFKLQFELSSLQLLQVQAFIASSTLSSCSGASLVSSSSSSFPHFECFKFKFKLCSLQDQARA
FITSSTLSSRLRLVSVTRLEAKQRMNTEGHSPTLLEAK