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Spg020212 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020212
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionNudix hydrolase
Genome locationscaffold1:23605637..23605960
RNA-Seq ExpressionSpg020212
SyntenySpg020212
Gene Ontology termsGO:0006203 - dGTP catabolic process (biological process)
GO:0005829 - cytosol (cellular component)
GO:0035539 - 8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity (molecular function)
InterPro domainsIPR000086 - NUDIX hydrolase domain
IPR015797 - NUDIX hydrolase-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4356844.1 hypothetical protein F8388_019503 [Cannabis sativa]3.7e-3570.1Show/hide
Query:  GESFEECATREVKEETRLDIENIEFITATNSVFLDNPTPSHYAVIFMRATMADPKQIVRNVEPEKCDGWDWYEWDHLPHPLFSPLQKFVNNCFNSFP
        GESFE+CA REVKEET LDIE IEF+T TN+VFLD P PSHY  IFMRA + DP+Q+ +N+EP+KCDGWDWYEWD+LP PLF PL+K V + FN FP
Subjt:  GESFEECATREVKEETRLDIENIEFITATNSVFLDNPTPSHYAVIFMRATMADPKQIVRNVEPEKCDGWDWYEWDHLPHPLFSPLQKFVNNCFNSFP

XP_004135122.1 geranyl diphosphate phosphohydrolase [Cucumis sativus]2.0e-3364.95Show/hide
Query:  GESFEECATREVKEETRLDIENIEFITATNSVFLDNPTPSHYAVIFMRATMADPKQIVRNVEPEKCDGWDWYEWDHLPHPLFSPLQKFVNNCFNSFP
        GE+FEECA RE+KEET LDIE IEF+  TN++F+D P P+HY V+F+RA + DP Q   N+EPEKCDGWDWYEWD LPHPLF P++K V + FN FP
Subjt:  GESFEECATREVKEETRLDIENIEFITATNSVFLDNPTPSHYAVIFMRATMADPKQIVRNVEPEKCDGWDWYEWDHLPHPLFSPLQKFVNNCFNSFP

XP_006437760.1 nudix hydrolase 1 [Citrus clementina]7.0e-3469.07Show/hide
Query:  GESFEECATREVKEETRLDIENIEFITATNSVFLDNPTPSHYAVIFMRATMADPKQIVRNVEPEKCDGWDWYEWDHLPHPLFSPLQKFVNNCFNSFP
        GESFEECA RE+KEET LDIE IEF+T TNSVFL+NP PSHY VIF+RA +ADP Q  +N+EP+KC GWDWY+W++LP PLF PL+K V + FN FP
Subjt:  GESFEECATREVKEETRLDIENIEFITATNSVFLDNPTPSHYAVIFMRATMADPKQIVRNVEPEKCDGWDWYEWDHLPHPLFSPLQKFVNNCFNSFP

XP_022148636.1 geranyl diphosphate phosphohydrolase-like [Momordica charantia]3.8e-4079.59Show/hide
Query:  GESFEECATREVKEETRLDIENIEFITATNSVFLDNPTPSHYAVIFMRATMADPKQIVRNVEPEKCDGWDWYEWDHLPHPLFSPLQKFVNNCFNSFPK
        GESFEECA RE+KEET LDIE IEFITATN++FLDNP+PSHY VIFMRAT+ADP QI RN+EPEKCDGWDWYEWD LP PLFSPL  FVN  F+ FPK
Subjt:  GESFEECATREVKEETRLDIENIEFITATNSVFLDNPTPSHYAVIFMRATMADPKQIVRNVEPEKCDGWDWYEWDHLPHPLFSPLQKFVNNCFNSFPK

XP_030481487.1 geranyl diphosphate phosphohydrolase [Cannabis sativa]2.2e-3569.39Show/hide
Query:  GESFEECATREVKEETRLDIENIEFITATNSVFLDNPTPSHYAVIFMRATMADPKQIVRNVEPEKCDGWDWYEWDHLPHPLFSPLQKFVNNCFNSFPK
        GESFE+CA REVKEET LDIE IEF+T TN+VFLD P PSHY  IFMRA + DP+Q+ +N+EP+KCDGWDWYEWD+LP PLF PL+K V + FN FP+
Subjt:  GESFEECATREVKEETRLDIENIEFITATNSVFLDNPTPSHYAVIFMRATMADPKQIVRNVEPEKCDGWDWYEWDHLPHPLFSPLQKFVNNCFNSFPK

TrEMBL top hitse value%identityAlignment
A0A6J1D608 geranyl diphosphate phosphohydrolase-like1.8e-4079.59Show/hide
Query:  GESFEECATREVKEETRLDIENIEFITATNSVFLDNPTPSHYAVIFMRATMADPKQIVRNVEPEKCDGWDWYEWDHLPHPLFSPLQKFVNNCFNSFPK
        GESFEECA RE+KEET LDIE IEFITATN++FLDNP+PSHY VIFMRAT+ADP QI RN+EPEKCDGWDWYEWD LP PLFSPL  FVN  F+ FPK
Subjt:  GESFEECATREVKEETRLDIENIEFITATNSVFLDNPTPSHYAVIFMRATMADPKQIVRNVEPEKCDGWDWYEWDHLPHPLFSPLQKFVNNCFNSFPK

A0A7J6I634 Nudix hydrolase domain-containing protein1.8e-3570.1Show/hide
Query:  GESFEECATREVKEETRLDIENIEFITATNSVFLDNPTPSHYAVIFMRATMADPKQIVRNVEPEKCDGWDWYEWDHLPHPLFSPLQKFVNNCFNSFP
        GESFE+CA REVKEET LDIE IEF+T TN+VFLD P PSHY  IFMRA + DP+Q+ +N+EP+KCDGWDWYEWD+LP PLF PL+K V + FN FP
Subjt:  GESFEECATREVKEETRLDIENIEFITATNSVFLDNPTPSHYAVIFMRATMADPKQIVRNVEPEKCDGWDWYEWDHLPHPLFSPLQKFVNNCFNSFP

A0A803RAE2 Uncharacterized protein1.0e-3569.39Show/hide
Query:  GESFEECATREVKEETRLDIENIEFITATNSVFLDNPTPSHYAVIFMRATMADPKQIVRNVEPEKCDGWDWYEWDHLPHPLFSPLQKFVNNCFNSFPK
        GESFE+CA REVKEET LDIE IEF+T TN+VFLD P PSHY  IFMRA + DP+Q+ +N+EP+KCDGWDWYEWD+LP PLF PL+K V + FN FP+
Subjt:  GESFEECATREVKEETRLDIENIEFITATNSVFLDNPTPSHYAVIFMRATMADPKQIVRNVEPEKCDGWDWYEWDHLPHPLFSPLQKFVNNCFNSFPK

A0A803RAE3 Uncharacterized protein1.4e-3570.1Show/hide
Query:  GESFEECATREVKEETRLDIENIEFITATNSVFLDNPTPSHYAVIFMRATMADPKQIVRNVEPEKCDGWDWYEWDHLPHPLFSPLQKFVNNCFNSFP
        GESFE+CA REVKEET LDIE IEF+T TN+VFLD P PSHY  IFMRA + DP+Q+ +N+EP+KCDGWDWYEWD+LP PLF PL+K V + FN FP
Subjt:  GESFEECATREVKEETRLDIENIEFITATNSVFLDNPTPSHYAVIFMRATMADPKQIVRNVEPEKCDGWDWYEWDHLPHPLFSPLQKFVNNCFNSFP

A0A803RAE4 Uncharacterized protein8.9e-3569.79Show/hide
Query:  ESFEECATREVKEETRLDIENIEFITATNSVFLDNPTPSHYAVIFMRATMADPKQIVRNVEPEKCDGWDWYEWDHLPHPLFSPLQKFVNNCFNSFP
        ESFE+CA REVKEET LDIE IEF+T TN+VFLD P PSHY  IFMRA + DP+Q+ +N+EP+KCDGWDWYEWD+LP PLF PL+K V + FN FP
Subjt:  ESFEECATREVKEETRLDIENIEFITATNSVFLDNPTPSHYAVIFMRATMADPKQIVRNVEPEKCDGWDWYEWDHLPHPLFSPLQKFVNNCFNSFP

SwissProt top hitse value%identityAlignment
C5BHE7 NAD-capped RNA hydrolase NudC7.8e-0432.05Show/hide
Query:  GESFEECATREVKEETRLDIENIEFITATNSVFLDNPTPSHYAVIFMRATMADPKQIVRNVEPEKCDGWDWYEWDHLP
        GE+ E+ A RE+ EE+RL ++N+ ++T+        P P  +++  M A +AD        +P++    DWY +D LP
Subjt:  GESFEECATREVKEETRLDIENIEFITATNSVFLDNPTPSHYAVIFMRATMADPKQIVRNVEPEKCDGWDWYEWDHLP

M4I1C6 Geranyl diphosphate phosphohydrolase3.0e-3262.89Show/hide
Query:  GESFEECATREVKEETRLDIENIEFITATNSVFLDNPTPSHYAVIFMRATMADPKQIVRNVEPEKCDGWDWYEWDHLPHPLFSPLQKFVNNCFNSFP
        GESFEECA RE+KEET LDI  IE +T TN++FLD   PS Y  +FMRA +ADP+Q  +N+EPE CDGW WYEWD+LP PLF PL   V + FN FP
Subjt:  GESFEECATREVKEETRLDIENIEFITATNSVFLDNPTPSHYAVIFMRATMADPKQIVRNVEPEKCDGWDWYEWDHLPHPLFSPLQKFVNNCFNSFP

Q8BG93 Nucleotide triphosphate diphosphatase NUDT156.8e-0837.35Show/hide
Query:  GESFEECATREVKEETRLDIENIEFITATNSVFLDNPTPSHYAVIFMRATM-----ADPKQIVRNVEPEKCDGWDWYEWDHLP
        GE++EECA RE  EE  L ++N+ F +  NS F++     HY  I M+  +     ++P    RN+EPEK + W+W  W+  P
Subjt:  GESFEECATREVKEETRLDIENIEFITATNSVFLDNPTPSHYAVIFMRATM-----ADPKQIVRNVEPEKCDGWDWYEWDHLP

Q9CA40 Nudix hydrolase 13.7e-3058.33Show/hide
Query:  GESFEECATREVKEETRLDIENIEFITATNSVFLDNPTPSHYAVIFMRATMADPKQIVRNVEPEKCDGWDWYEWDHLPHPLFSPLQKFVNNCFNSF
        GESFEECA REV EET L IE ++ +T TN+VF + PTPSHY  + +RA + DP Q  +N+EPEKC+GWDWY+W++LP PLF PL+K   + FN F
Subjt:  GESFEECATREVKEETRLDIENIEFITATNSVFLDNPTPSHYAVIFMRATMADPKQIVRNVEPEKCDGWDWYEWDHLPHPLFSPLQKFVNNCFNSF

Q9NV35 Nucleotide triphosphate diphosphatase NUDT152.1e-0939.76Show/hide
Query:  GESFEECATREVKEETRLDIENIEFITATNSVFLDNPTPSHYAVIFMRATM-----ADPKQIVRNVEPEKCDGWDWYEWDHLP
        GE++EECA RE  EE  L ++N+ F +  NS F++     HY  I M+  +     ++PK    NVEPEK + W+W  W+ LP
Subjt:  GESFEECATREVKEETRLDIENIEFITATNSVFLDNPTPSHYAVIFMRATM-----ADPKQIVRNVEPEKCDGWDWYEWDHLP

Arabidopsis top hitse value%identityAlignment
AT1G68760.1 nudix hydrolase 12.6e-3158.33Show/hide
Query:  GESFEECATREVKEETRLDIENIEFITATNSVFLDNPTPSHYAVIFMRATMADPKQIVRNVEPEKCDGWDWYEWDHLPHPLFSPLQKFVNNCFNSF
        GESFEECA REV EET L IE ++ +T TN+VF + PTPSHY  + +RA + DP Q  +N+EPEKC+GWDWY+W++LP PLF PL+K   + FN F
Subjt:  GESFEECATREVKEETRLDIENIEFITATNSVFLDNPTPSHYAVIFMRATMADPKQIVRNVEPEKCDGWDWYEWDHLPHPLFSPLQKFVNNCFNSF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGCTTCCGTTTACAACATTTCAGGGGAGAGTTTCGAGGAATGTGCTACGAGAGAAGTGAAGGAGGAGACCAGATTAGACATTGAGAACATCGAGTTCATTACAGC
CACGAACAGTGTGTTTCTGGACAATCCAACTCCTTCGCATTACGCAGTGATCTTCATGCGGGCAACAATGGCGGATCCGAAGCAGATAGTTCGAAATGTGGAGCCTGAGA
AGTGCGATGGCTGGGACTGGTATGAATGGGATCATCTTCCTCATCCTCTCTTTAGCCCTCTTCAGAAATTTGTGAACAATTGCTTTAATTCATTCCCAAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGCTTCCGTTTACAACATTTCAGGGGAGAGTTTCGAGGAATGTGCTACGAGAGAAGTGAAGGAGGAGACCAGATTAGACATTGAGAACATCGAGTTCATTACAGC
CACGAACAGTGTGTTTCTGGACAATCCAACTCCTTCGCATTACGCAGTGATCTTCATGCGGGCAACAATGGCGGATCCGAAGCAGATAGTTCGAAATGTGGAGCCTGAGA
AGTGCGATGGCTGGGACTGGTATGAATGGGATCATCTTCCTCATCCTCTCTTTAGCCCTCTTCAGAAATTTGTGAACAATTGCTTTAATTCATTCCCAAAGTGA
Protein sequenceShow/hide protein sequence
MNASVYNISGESFEECATREVKEETRLDIENIEFITATNSVFLDNPTPSHYAVIFMRATMADPKQIVRNVEPEKCDGWDWYEWDHLPHPLFSPLQKFVNNCFNSFPK