; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg020218 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020218
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRING/FYVE/PHD zinc finger superfamily protein, putative isoform 1
Genome locationscaffold1:28938343..28941543
RNA-Seq ExpressionSpg020218
SyntenySpg020218
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060071.1 RING/FYVE/PHD zinc finger superfamily protein, putative isoform 1 [Cucumis melo var. makuwa]2.7e-2392.65Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVSYSR
        MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLL HTAIHT+RAYPRFRLAFSRLF S F VSYSR
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVSYSR

KAE8649764.1 hypothetical protein Csa_012384 [Cucumis sativus]1.2e-2376.14Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVSYSRLSVSSFSCNYVMLMRFVEQI
        MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLL HTAIHT+RAYPRFRLAFSRLF SVF VSYSR ++ S+  + +  + ++E I
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVSYSRLSVSSFSCNYVMLMRFVEQI

KAG6595630.1 hypothetical protein SDJN03_12183, partial [Cucurbita argyrosperma subsp. sororia]4.7e-2082.86Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVSYSRLS
        MLQLFFAVAFSAVPLTLYVPPIRSL+LFVETLE+LLR +A HTLR YPRFR AFSRLF S+F VS SRL+
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVSYSRLS

KAG6603254.1 hypothetical protein SDJN03_03863, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2372.63Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVSYSRLSVSSFSCNYVMLMRFVEQINEIDSIL
        MLQLFFAVAFSA PLT YVPPIRSL+LFVETLEDL RHTA HT RAYPRFRLAFSR+FGSVF VSYSR    S  CN  +L RF++ I    S+L
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVSYSRLSVSSFSCNYVMLMRFVEQINEIDSIL

KAG7037385.1 hypothetical protein SDJN02_01010, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-2372.63Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVSYSRLSVSSFSCNYVMLMRFVEQINEIDSIL
        MLQLFFAVAFSA PLT YVPPIRSL+LFVETLEDL RHTA HT RAYPRFRLAFSR+FGSVF VSYSR    S  CN  +L RF++ I    S+L
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVSYSRLSVSSFSCNYVMLMRFVEQINEIDSIL

TrEMBL top hitse value%identityAlignment
A0A0A0KZF7 Uncharacterized protein5.8e-2476.14Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVSYSRLSVSSFSCNYVMLMRFVEQI
        MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLL HTAIHT+RAYPRFRLAFSRLF SVF VSYSR ++ S+  + +  + ++E I
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVSYSRLSVSSFSCNYVMLMRFVEQI

A0A2C9V7E1 Uncharacterized protein4.8e-1880Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVS
        MLQLFFAVAFSAVPLTLYVPPIRSL+ FVET+EDLLR TA ++LRAYPRFRLAFSR+F ++F +S
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVS

A0A5A7V2T5 RING/FYVE/PHD zinc finger superfamily protein, putative isoform 11.3e-2392.65Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVSYSR
        MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLL HTAIHT+RAYPRFRLAFSRLF S F VSYSR
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVSYSR

A0A6P6AMB2 uncharacterized protein LOC111310902 isoform X19.6e-1963.27Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVSYSRLSVSSFSCNYVMLMRFVEQINEIDSILSKF
        MLQLFFAVAFSAVPLTLYVPPIRSL+LFVET+ED+LR T ++TLRAYPR RL FSR+FGS+F        +SSFS   +     VEQ N    +L KF
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVSYSRLSVSSFSCNYVMLMRFVEQINEIDSILSKF

A0A6P6AMC9 uncharacterized protein LOC111310902 isoform X25.6e-1980Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVS
        MLQLFFAVAFSAVPLTLYVPPIRSL+LFVET+ED+LR T ++TLRAYPR RL FSR+FGS+F +S
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52105.1 unknown protein7.8e-1355.38Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVS
        MLQLFF +AFSA PLTLY+PPIR L++FVET+E++     +++ R +PR R+A+SRL    FS S
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCAGCTGTTCTTCGCCGTCGCTTTCTCGGCAGTGCCATTGACGCTCTATGTGCCGCCGATTCGGAGCCTCAGTCTGTTCGTCGAAACCCTAGAAGATCTTCTCCG
TCACACCGCCATTCATACGCTCAGAGCTTATCCTCGCTTTCGCCTCGCCTTCTCTCGCCTCTTCGGCTCTGTATTCAGCGTTTCTTATTCCAGATTATCTGTTTCTTCGT
TTTCTTGTAATTACGTCATGTTGATGCGATTTGTTGAACAGATTAATGAAATCGATTCGATTTTGAGCAAATTTTGTTGGTTTCTTCTCTGGTTTTTTCAGCCTTTCCAA
TGGGCATGGGCAAAGAAATGCGGTTTGTATAGAGGGAAGATGTTGAGTGGGTTGCATTTCATGAACTTTCTGGCCCCAGTGGCGTTGGTTCCGTGTCAGCAATTCGAGTC
AGGCACTGGCGGAGGAAAATTTGATTGTTTGGAAACAAATGAAATTGGATGGCTGTTGGACGTTCTTCGACAGATGCAAAACAAGGTTTTGCGAAATTGGCTAAATTTGA
AAATTGAAAAGAATAGGGCAGACAGTGGACAAACACTTAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCAGCTGTTCTTCGCCGTCGCTTTCTCGGCAGTGCCATTGACGCTCTATGTGCCGCCGATTCGGAGCCTCAGTCTGTTCGTCGAAACCCTAGAAGATCTTCTCCG
TCACACCGCCATTCATACGCTCAGAGCTTATCCTCGCTTTCGCCTCGCCTTCTCTCGCCTCTTCGGCTCTGTATTCAGCGTTTCTTATTCCAGATTATCTGTTTCTTCGT
TTTCTTGTAATTACGTCATGTTGATGCGATTTGTTGAACAGATTAATGAAATCGATTCGATTTTGAGCAAATTTTGTTGGTTTCTTCTCTGGTTTTTTCAGCCTTTCCAA
TGGGCATGGGCAAAGAAATGCGGTTTGTATAGAGGGAAGATGTTGAGTGGGTTGCATTTCATGAACTTTCTGGCCCCAGTGGCGTTGGTTCCGTGTCAGCAATTCGAGTC
AGGCACTGGCGGAGGAAAATTTGATTGTTTGGAAACAAATGAAATTGGATGGCTGTTGGACGTTCTTCGACAGATGCAAAACAAGGTTTTGCGAAATTGGCTAAATTTGA
AAATTGAAAAGAATAGGGCAGACAGTGGACAAACACTTAAATGA
Protein sequenceShow/hide protein sequence
MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVSYSRLSVSSFSCNYVMLMRFVEQINEIDSILSKFCWFLLWFFQPFQ
WAWAKKCGLYRGKMLSGLHFMNFLAPVALVPCQQFESGTGGGKFDCLETNEIGWLLDVLRQMQNKVLRNWLNLKIEKNRADSGQTLK