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Spg020255 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020255
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold1:23160636..23163157
RNA-Seq ExpressionSpg020255
SyntenySpg020255
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158565.1 uncharacterized protein LOC111025018 [Momordica charantia]5.9e-1042.86Show/hide
Query:  FNATWDMFASELSDTLTSRTEPAGTSSRGSKRKRSSLHTEMIEVVEAAMDMQTSHLQKLTSWQQESYEREATRRKLVVDQLEEMAEFDEGDKVQLLAV
        FN T D    +L +T TS+    GTSS GSKRKRS   +EM++VV   M MQT+HL+K+ +W  +  E++  RRK+V DQL+++   +  D V+L+ +
Subjt:  FNATWDMFASELSDTLTSRTEPAGTSSRGSKRKRSSLHTEMIEVVEAAMDMQTSHLQKLTSWQQESYEREATRRKLVVDQLEEMAEFDEGDKVQLLAV

XP_038877407.1 uncharacterized protein LOC120069696 [Benincasa hispida]2.3e-0639.56Show/hide
Query:  DMFASELSDTLTSRTEPAGTSSRGSKRKRSSLHTEMIEVVEAAMDMQTSHLQKLTSWQQESYEREATRRKLVVDQLEEMAEFDEGDKVQLL
        D    E ++  T RT     SSRGSKRKRSS   EMI+++ + ++M ++H+ +L SWQ++ YE E  R+K VV+ +  +   DE  +V L+
Subjt:  DMFASELSDTLTSRTEPAGTSSRGSKRKRSSLHTEMIEVVEAAMDMQTSHLQKLTSWQQESYEREATRRKLVVDQLEEMAEFDEGDKVQLL

XP_038887234.1 uncharacterized protein LOC120077425 [Benincasa hispida]1.8e-0640.66Show/hide
Query:  DMFASELSDTLTSRTEPAGTSSRGSKRKRSSLHTEMIEVVEAAMDMQTSHLQKLTSWQQESYEREATRRKLVVDQLEEMAEFDEGDKVQLL
        D    E ++  T R      SSRGSKRKRSS   EMI++V++ ++MQ++H+ +L SWQ E YE E    K VV+ +  + + +E D+V L+
Subjt:  DMFASELSDTLTSRTEPAGTSSRGSKRKRSSLHTEMIEVVEAAMDMQTSHLQKLTSWQQESYEREATRRKLVVDQLEEMAEFDEGDKVQLL

XP_038896380.1 uncharacterized protein LOC120084641 [Benincasa hispida]1.6e-0740.66Show/hide
Query:  DMFASELSDTLTSRTEPAGTSSRGSKRKRSSLHTEMIEVVEAAMDMQTSHLQKLTSWQQESYEREATRRKLVVDQLEEMAEFDEGDKVQLL
        D    E ++  T R      SSRGSKRKR S   EMI+++ + ++MQ++H+ +L SWQ+E YE E  RRK VV+ +  +   DE D+V  +
Subjt:  DMFASELSDTLTSRTEPAGTSSRGSKRKRSSLHTEMIEVVEAAMDMQTSHLQKLTSWQQESYEREATRRKLVVDQLEEMAEFDEGDKVQLL

XP_038899910.1 uncharacterized protein LOC120087100 [Benincasa hispida]3.9e-0633.06Show/hide
Query:  MASNVTDQMEDDVQLG--------------PFNATWDMFASELSDTLTSRTEPAGTSSRGSKRKRSSLHTEMIEVVEAAMDMQTSHLQKLTSWQQESYER
        MA N   + ED+++LG              P N   D    E ++  T R      +S+GSKRKR S   EMI+++ + ++MQ++H+ +L SWQ+E YE 
Subjt:  MASNVTDQMEDDVQLG--------------PFNATWDMFASELSDTLTSRTEPAGTSSRGSKRKRSSLHTEMIEVVEAAMDMQTSHLQKLTSWQQESYER

Query:  EATRRKLVVDQLEEMAEFDEGDKV
        E    K VV+ +  +   DE D++
Subjt:  EATRRKLVVDQLEEMAEFDEGDKV

TrEMBL top hitse value%identityAlignment
A0A6J1DW73 uncharacterized protein LOC1110250182.8e-1042.86Show/hide
Query:  FNATWDMFASELSDTLTSRTEPAGTSSRGSKRKRSSLHTEMIEVVEAAMDMQTSHLQKLTSWQQESYEREATRRKLVVDQLEEMAEFDEGDKVQLLAV
        FN T D    +L +T TS+    GTSS GSKRKRS   +EM++VV   M MQT+HL+K+ +W  +  E++  RRK+V DQL+++   +  D V+L+ +
Subjt:  FNATWDMFASELSDTLTSRTEPAGTSSRGSKRKRSSLHTEMIEVVEAAMDMQTSHLQKLTSWQQESYEREATRRKLVVDQLEEMAEFDEGDKVQLLAV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCAAATGTTACCGATCAAATGGAGGATGATGTGCAGTTGGGACCATTCAATGCAACATGGGACATGTTTGCAAGTGAGTTGTCAGACACACTGACCAGTAGGAC
TGAGCCAGCGGGGACATCATCACGAGGAAGTAAGAGGAAACGATCTTCCCTTCACACAGAAATGATTGAAGTGGTCGAGGCGGCAATGGATATGCAAACTAGCCACCTTC
AGAAGCTCACATCGTGGCAACAGGAAAGCTACGAACGGGAGGCTACACGACGCAAGTTAGTGGTTGATCAACTTGAAGAAATGGCGGAATTCGATGAGGGGGATAAAGTT
CAACTTCTCGCTGTCGACCCCGCCCCCCGTGTGGTTTCTCGTTCGCCAGCAGCTCCCGCGCGCCAGCCTTCAATGTCGTTGTCGCCGTTCTTCAGTCTCTCTCTCGGTGT
GGTGACGTTTGGCAAGCAGCAGGATTCTGATCGTCGAGTTTGCCTTGGTGTGAGACTCGCGCGACTCTCACCCTTTTCGGTGTCGTTTGGACATTCCGATTATGCAAGTG
TTGATGATTGTTATGAGTCTGGTGATGCAGATGAGGAGGCGCACGAGGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCAAATGTTACCGATCAAATGGAGGATGATGTGCAGTTGGGACCATTCAATGCAACATGGGACATGTTTGCAAGTGAGTTGTCAGACACACTGACCAGTAGGAC
TGAGCCAGCGGGGACATCATCACGAGGAAGTAAGAGGAAACGATCTTCCCTTCACACAGAAATGATTGAAGTGGTCGAGGCGGCAATGGATATGCAAACTAGCCACCTTC
AGAAGCTCACATCGTGGCAACAGGAAAGCTACGAACGGGAGGCTACACGACGCAAGTTAGTGGTTGATCAACTTGAAGAAATGGCGGAATTCGATGAGGGGGATAAAGTT
CAACTTCTCGCTGTCGACCCCGCCCCCCGTGTGGTTTCTCGTTCGCCAGCAGCTCCCGCGCGCCAGCCTTCAATGTCGTTGTCGCCGTTCTTCAGTCTCTCTCTCGGTGT
GGTGACGTTTGGCAAGCAGCAGGATTCTGATCGTCGAGTTTGCCTTGGTGTGAGACTCGCGCGACTCTCACCCTTTTCGGTGTCGTTTGGACATTCCGATTATGCAAGTG
TTGATGATTGTTATGAGTCTGGTGATGCAGATGAGGAGGCGCACGAGGGGTGA
Protein sequenceShow/hide protein sequence
MASNVTDQMEDDVQLGPFNATWDMFASELSDTLTSRTEPAGTSSRGSKRKRSSLHTEMIEVVEAAMDMQTSHLQKLTSWQQESYEREATRRKLVVDQLEEMAEFDEGDKV
QLLAVDPAPRVVSRSPAAPARQPSMSLSPFFSLSLGVVTFGKQQDSDRRVCLGVRLARLSPFSVSFGHSDYASVDDCYESGDADEEAHEG