; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg020273 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020273
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionMuDRA-like transposase
Genome locationscaffold1:24265417..24267657
RNA-Seq ExpressionSpg020273
SyntenySpg020273
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064137.1 MuDRA-like transposase [Cucumis melo var. makuwa]9.9e-5142.16Show/hide
Query:  CTFACKDHLKKAVYNIALKESFQFKTVKSNSRQF-----KMEQIIPSIRSELEEVGYARWSRAFSTSQRYVLMATNVSESLNAFLIEAGGLPIIPLLEFI
        C F    +LK++  ++ +++SF   T      +F     +++Q+ PS+R ELE VG  +W+RAF   +RY +M TN+SES+N+ L E   LP+I LLE +
Subjt:  CTFACKDHLKKAVYNIALKESFQFKTVKSNSRQF-----KMEQIIPSIRSELEEVGYARWSRAFSTSQRYVLMATNVSESLNAFLIEAGGLPIIPLLEFI

Query:  RDFLQRWFYERRNHASFQMTTVTDYAVGEIQDALKASRTMDIYPVDRVQFQVHDQNKQFEVNITNQSCTCRRWESDLIPCVHACIAICRKGLNIDTIVHE
        R  +++WFYERR   SFQ T ++ YA   I+++L+ SR+M+IYPVD+ +F+VH + +QF VNI N++C+CR+W+ DLIPC HACIA+    LN+     +
Subjt:  RDFLQRWFYERRNHASFQMTTVTDYAVGEIQDALKASRTMDIYPVDRVQFQVHDQNKQFEVNITNQSCTCRRWESDLIPCVHACIAICRKGLNIDTIVHE

Query:  FYRNSNLQKMYSVNVHLIGSMRQDISTSTVEVNIVHPTVSKRGAGRPKKKRIGPQSERVQTQSCGRCG
        FY  SNL  +Y      IG++ Q  +T     + + P+  KR AGRPKKKR     E+  T  C RCG
Subjt:  FYRNSNLQKMYSVNVHLIGSMRQDISTSTVEVNIVHPTVSKRGAGRPKKKRIGPQSERVQTQSCGRCG

TYK09853.1 uncharacterized protein E5676_scaffold39G00210 [Cucumis melo var. makuwa]8.4e-5041.79Show/hide
Query:  CTFACKDHLKKAVYNIALKESFQ-----FKTVKSNSRQFKMEQIIPSIRSELEEVGYARWSRAFSTSQRYVLMATNVSESLNAFLIEAGGLPIIPLLEFI
        C F    +LKK   ++ +++SF      +  ++      ++EQ+ PS+R ELE VG  +W+RAF   +RY ++ TN+SES+ + L E   LP+I LLE I
Subjt:  CTFACKDHLKKAVYNIALKESFQ-----FKTVKSNSRQFKMEQIIPSIRSELEEVGYARWSRAFSTSQRYVLMATNVSESLNAFLIEAGGLPIIPLLEFI

Query:  RDFLQRWFYERRNHASFQMTTVTDYAVGEIQDALKASRTMDIYPVDRVQFQVHDQNKQFEVNITNQSCTCRRWESDLIPCVHACIAICRKGLNIDTIVHE
        R  +Q+WFYERR   SFQ T ++ YA   I+++L  SR+M+IYPVD+ +F+VH + +QF VNI N++C+CR+W+ DLIPC HACIA+  + LN+     +
Subjt:  RDFLQRWFYERRNHASFQMTTVTDYAVGEIQDALKASRTMDIYPVDRVQFQVHDQNKQFEVNITNQSCTCRRWESDLIPCVHACIAICRKGLNIDTIVHE

Query:  FYRNSNLQKMYSVNVHLIGSMRQDISTSTVEVNIVHPTVSKRGAGRPKKKRIGPQSERVQTQSCGRCG
        FY  SNL  +Y      IG++ Q  +T     + + P   KR AGRPKKKR     E+  +  C RCG
Subjt:  FYRNSNLQKMYSVNVHLIGSMRQDISTSTVEVNIVHPTVSKRGAGRPKKKRIGPQSERVQTQSCGRCG

XP_008444294.1 PREDICTED: uncharacterized protein LOC103487663 [Cucumis melo]9.9e-5142.16Show/hide
Query:  CTFACKDHLKKAVYNIALKESFQFKTVKSNSRQF-----KMEQIIPSIRSELEEVGYARWSRAFSTSQRYVLMATNVSESLNAFLIEAGGLPIIPLLEFI
        C F    +LK++  ++ +++SF   T      +F     +++Q+ PS+R ELE VG  +W+RAF   +RY +M TN+SES+N+ L E   LP+I LLE +
Subjt:  CTFACKDHLKKAVYNIALKESFQFKTVKSNSRQF-----KMEQIIPSIRSELEEVGYARWSRAFSTSQRYVLMATNVSESLNAFLIEAGGLPIIPLLEFI

Query:  RDFLQRWFYERRNHASFQMTTVTDYAVGEIQDALKASRTMDIYPVDRVQFQVHDQNKQFEVNITNQSCTCRRWESDLIPCVHACIAICRKGLNIDTIVHE
        R  +++WFYERR   SFQ T ++ YA   I+++L+ SR+M+IYPVD+ +F+VH + +QF VNI N++C+CR+W+ DLIPC HACIA+    LN+     +
Subjt:  RDFLQRWFYERRNHASFQMTTVTDYAVGEIQDALKASRTMDIYPVDRVQFQVHDQNKQFEVNITNQSCTCRRWESDLIPCVHACIAICRKGLNIDTIVHE

Query:  FYRNSNLQKMYSVNVHLIGSMRQDISTSTVEVNIVHPTVSKRGAGRPKKKRIGPQSERVQTQSCGRCG
        FY  SNL  +Y      IG++ Q  +T     + + P+  KR AGRPKKKR     E+  T  C RCG
Subjt:  FYRNSNLQKMYSVNVHLIGSMRQDISTSTVEVNIVHPTVSKRGAGRPKKKRIGPQSERVQTQSCGRCG

XP_022157216.1 uncharacterized protein LOC111023978 [Momordica charantia]3.9e-5547.14Show/hide
Query:  MEQIIPSIRSELEEVGYARWSRAFSTSQRYVLMATNVSESLNAFLIEAGGLPIIPLLEFIRDFLQRWFYERRNHASFQMTTVTDYAVGEIQDALKASRTM
        +EQ++P IR EL+E+GY +W+RAFST  R+ LM TN+SES+N+   EA  LP+I LL+ IRD +QRWFYERR+  S+Q   +T +    ++ +LK SRTM
Subjt:  MEQIIPSIRSELEEVGYARWSRAFSTSQRYVLMATNVSESLNAFLIEAGGLPIIPLLEFIRDFLQRWFYERRNHASFQMTTVTDYAVGEIQDALKASRTM

Query:  DIYPVDRVQFQVHDQNKQFEVNITNQSCTCRRWESDLIPCVHACIAICRKGLNIDTIVHEFYRNSNLQKMYSVNVHLIGSMRQDISTSTVEVNIVHPTVS
        DIYPVD+  + VH+ ++ F VNI + +C  ++W+ D IPC HAC+AI R+GL + + VH+FY    LQ +YS NVH IG +   +     +   + P   
Subjt:  DIYPVDRVQFQVHDQNKQFEVNITNQSCTCRRWESDLIPCVHACIAICRKGLNIDTIVHEFYRNSNLQKMYSVNVHLIGSMRQDISTSTVEVNIVHPTVS

Query:  KRGAGRPKKKRIGPQSERVQTQSCGRC
        KR AGRP+KKR+  + E   T  CGRC
Subjt:  KRGAGRPKKKRIGPQSERVQTQSCGRC

XP_038885920.1 uncharacterized protein LOC120076228 [Benincasa hispida]1.4e-4947.87Show/hide
Query:  KMEQIIPSIRSELEEVGYARWSRAFSTSQRYVLMATNVSESLNAFLIEAGGLPIIPLLEFIRDFLQRWFYERRNHASFQMTTVTDYAVGEIQDALKASRT
        +++ + PSIR ELE+VG ++W+RAF   +RY LM TN+ E +N+ L EA  LP+I LLE IR  +Q+WFY+RR+H SFQ + ++ +A   I+ AL+ SR+
Subjt:  KMEQIIPSIRSELEEVGYARWSRAFSTSQRYVLMATNVSESLNAFLIEAGGLPIIPLLEFIRDFLQRWFYERRNHASFQMTTVTDYAVGEIQDALKASRT

Query:  MDIYPVDRVQFQVHDQNKQFEVNITNQSCTCRRWESDLIPCVHACIAICRKGLNIDTIVHEFYRNSNLQKMYSVNVHLIGSMRQDISTSTVEVNIVHPTV
        +D+YP+++ +F+VHD++ QF VNI N++ +CR W+ D+IPC HACIA+ RK L + + VH+FYR SNL+ +Y     LIG+++Q  ++  V  + V P  
Subjt:  MDIYPVDRVQFQVHDQNKQFEVNITNQSCTCRRWESDLIPCVHACIAICRKGLNIDTIVHEFYRNSNLQKMYSVNVHLIGSMRQDISTSTVEVNIVHPTV

Query:  SKRGAGRPKKK
         KR AGRPKKK
Subjt:  SKRGAGRPKKK

TrEMBL top hitse value%identityAlignment
A0A1S3BA43 uncharacterized protein LOC1034876634.8e-5142.16Show/hide
Query:  CTFACKDHLKKAVYNIALKESFQFKTVKSNSRQF-----KMEQIIPSIRSELEEVGYARWSRAFSTSQRYVLMATNVSESLNAFLIEAGGLPIIPLLEFI
        C F    +LK++  ++ +++SF   T      +F     +++Q+ PS+R ELE VG  +W+RAF   +RY +M TN+SES+N+ L E   LP+I LLE +
Subjt:  CTFACKDHLKKAVYNIALKESFQFKTVKSNSRQF-----KMEQIIPSIRSELEEVGYARWSRAFSTSQRYVLMATNVSESLNAFLIEAGGLPIIPLLEFI

Query:  RDFLQRWFYERRNHASFQMTTVTDYAVGEIQDALKASRTMDIYPVDRVQFQVHDQNKQFEVNITNQSCTCRRWESDLIPCVHACIAICRKGLNIDTIVHE
        R  +++WFYERR   SFQ T ++ YA   I+++L+ SR+M+IYPVD+ +F+VH + +QF VNI N++C+CR+W+ DLIPC HACIA+    LN+     +
Subjt:  RDFLQRWFYERRNHASFQMTTVTDYAVGEIQDALKASRTMDIYPVDRVQFQVHDQNKQFEVNITNQSCTCRRWESDLIPCVHACIAICRKGLNIDTIVHE

Query:  FYRNSNLQKMYSVNVHLIGSMRQDISTSTVEVNIVHPTVSKRGAGRPKKKRIGPQSERVQTQSCGRCG
        FY  SNL  +Y      IG++ Q  +T     + + P+  KR AGRPKKKR     E+  T  C RCG
Subjt:  FYRNSNLQKMYSVNVHLIGSMRQDISTSTVEVNIVHPTVSKRGAGRPKKKRIGPQSERVQTQSCGRCG

A0A5A7SJA0 Uncharacterized protein4.5e-4941.42Show/hide
Query:  CTFACKDHLKKAVYNIALKESFQ-----FKTVKSNSRQFKMEQIIPSIRSELEEVGYARWSRAFSTSQRYVLMATNVSESLNAFLIEAGGLPIIPLLEFI
        C F    +LKK   ++ +++SF      +  ++      ++EQ+ PS+R ELE VG  +W+RAF   +RY ++ TN+SES+N+ L E   LP+I LLE I
Subjt:  CTFACKDHLKKAVYNIALKESFQ-----FKTVKSNSRQFKMEQIIPSIRSELEEVGYARWSRAFSTSQRYVLMATNVSESLNAFLIEAGGLPIIPLLEFI

Query:  RDFLQRWFYERRNHASFQMTTVTDYAVGEIQDALKASRTMDIYPVDRVQFQVHDQNKQFEVNITNQSCTCRRWESDLIPCVHACIAICRKGLNIDTIVHE
        R  +Q+WFYERR   SFQ T ++ YA   I+++L  S +M+IYPVD+ +F+VH + +QF VNI N++C+CR+W+ DLIPC HAC A+  + LN+     +
Subjt:  RDFLQRWFYERRNHASFQMTTVTDYAVGEIQDALKASRTMDIYPVDRVQFQVHDQNKQFEVNITNQSCTCRRWESDLIPCVHACIAICRKGLNIDTIVHE

Query:  FYRNSNLQKMYSVNVHLIGSMRQDISTSTVEVNIVHPTVSKRGAGRPKKKRIGPQSERVQTQSCGRCG
        FY  SNL  +Y      IG++ Q  +T     + + P   KR AGRPKKKR     E+  +  C RCG
Subjt:  FYRNSNLQKMYSVNVHLIGSMRQDISTSTVEVNIVHPTVSKRGAGRPKKKRIGPQSERVQTQSCGRCG

A0A5A7VAU3 MuDRA-like transposase4.8e-5142.16Show/hide
Query:  CTFACKDHLKKAVYNIALKESFQFKTVKSNSRQF-----KMEQIIPSIRSELEEVGYARWSRAFSTSQRYVLMATNVSESLNAFLIEAGGLPIIPLLEFI
        C F    +LK++  ++ +++SF   T      +F     +++Q+ PS+R ELE VG  +W+RAF   +RY +M TN+SES+N+ L E   LP+I LLE +
Subjt:  CTFACKDHLKKAVYNIALKESFQFKTVKSNSRQF-----KMEQIIPSIRSELEEVGYARWSRAFSTSQRYVLMATNVSESLNAFLIEAGGLPIIPLLEFI

Query:  RDFLQRWFYERRNHASFQMTTVTDYAVGEIQDALKASRTMDIYPVDRVQFQVHDQNKQFEVNITNQSCTCRRWESDLIPCVHACIAICRKGLNIDTIVHE
        R  +++WFYERR   SFQ T ++ YA   I+++L+ SR+M+IYPVD+ +F+VH + +QF VNI N++C+CR+W+ DLIPC HACIA+    LN+     +
Subjt:  RDFLQRWFYERRNHASFQMTTVTDYAVGEIQDALKASRTMDIYPVDRVQFQVHDQNKQFEVNITNQSCTCRRWESDLIPCVHACIAICRKGLNIDTIVHE

Query:  FYRNSNLQKMYSVNVHLIGSMRQDISTSTVEVNIVHPTVSKRGAGRPKKKRIGPQSERVQTQSCGRCG
        FY  SNL  +Y      IG++ Q  +T     + + P+  KR AGRPKKKR     E+  T  C RCG
Subjt:  FYRNSNLQKMYSVNVHLIGSMRQDISTSTVEVNIVHPTVSKRGAGRPKKKRIGPQSERVQTQSCGRCG

A0A5D3CDB8 Uncharacterized protein4.1e-5041.79Show/hide
Query:  CTFACKDHLKKAVYNIALKESFQ-----FKTVKSNSRQFKMEQIIPSIRSELEEVGYARWSRAFSTSQRYVLMATNVSESLNAFLIEAGGLPIIPLLEFI
        C F    +LKK   ++ +++SF      +  ++      ++EQ+ PS+R ELE VG  +W+RAF   +RY ++ TN+SES+ + L E   LP+I LLE I
Subjt:  CTFACKDHLKKAVYNIALKESFQ-----FKTVKSNSRQFKMEQIIPSIRSELEEVGYARWSRAFSTSQRYVLMATNVSESLNAFLIEAGGLPIIPLLEFI

Query:  RDFLQRWFYERRNHASFQMTTVTDYAVGEIQDALKASRTMDIYPVDRVQFQVHDQNKQFEVNITNQSCTCRRWESDLIPCVHACIAICRKGLNIDTIVHE
        R  +Q+WFYERR   SFQ T ++ YA   I+++L  SR+M+IYPVD+ +F+VH + +QF VNI N++C+CR+W+ DLIPC HACIA+  + LN+     +
Subjt:  RDFLQRWFYERRNHASFQMTTVTDYAVGEIQDALKASRTMDIYPVDRVQFQVHDQNKQFEVNITNQSCTCRRWESDLIPCVHACIAICRKGLNIDTIVHE

Query:  FYRNSNLQKMYSVNVHLIGSMRQDISTSTVEVNIVHPTVSKRGAGRPKKKRIGPQSERVQTQSCGRCG
        FY  SNL  +Y      IG++ Q  +T     + + P   KR AGRPKKKR     E+  +  C RCG
Subjt:  FYRNSNLQKMYSVNVHLIGSMRQDISTSTVEVNIVHPTVSKRGAGRPKKKRIGPQSERVQTQSCGRCG

A0A6J1DXB4 uncharacterized protein LOC1110239781.9e-5547.14Show/hide
Query:  MEQIIPSIRSELEEVGYARWSRAFSTSQRYVLMATNVSESLNAFLIEAGGLPIIPLLEFIRDFLQRWFYERRNHASFQMTTVTDYAVGEIQDALKASRTM
        +EQ++P IR EL+E+GY +W+RAFST  R+ LM TN+SES+N+   EA  LP+I LL+ IRD +QRWFYERR+  S+Q   +T +    ++ +LK SRTM
Subjt:  MEQIIPSIRSELEEVGYARWSRAFSTSQRYVLMATNVSESLNAFLIEAGGLPIIPLLEFIRDFLQRWFYERRNHASFQMTTVTDYAVGEIQDALKASRTM

Query:  DIYPVDRVQFQVHDQNKQFEVNITNQSCTCRRWESDLIPCVHACIAICRKGLNIDTIVHEFYRNSNLQKMYSVNVHLIGSMRQDISTSTVEVNIVHPTVS
        DIYPVD+  + VH+ ++ F VNI + +C  ++W+ D IPC HAC+AI R+GL + + VH+FY    LQ +YS NVH IG +   +     +   + P   
Subjt:  DIYPVDRVQFQVHDQNKQFEVNITNQSCTCRRWESDLIPCVHACIAICRKGLNIDTIVHEFYRNSNLQKMYSVNVHLIGSMRQDISTSTVEVNIVHPTVS

Query:  KRGAGRPKKKRIGPQSERVQTQSCGRC
        KR AGRP+KKR+  + E   T  CGRC
Subjt:  KRGAGRPKKKRIGPQSERVQTQSCGRC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGACAATTCAACAGGTGACGATTTTGTTTGGTGGTGTCTGGAGTGCTGAGGGTATTTACAGCGAATTCAAGTCCGGAAGTGTGGATGTTAGGAGCTGGTTGAATAA
CCCAATTAATATAATCATTTCCGAGGACAGAGATGTTTCTTGGATGATCAACAGATTTCAAAATGGTACATATAGGGGGTGCTGTGTAGTCGCTAACATTCTGGGTGTCC
ATACTGGTATACACACCATGGGGACAGGCGTAGGCCCATCTCGTGGGGACAGGAATTTTGATTTTATCAACGCGGATGGTATCGAAAATGCTCTAGACAATGCTACTGTA
TCGGAGGGGTGCACATTTGCCTGCAAAGATCATCTTAAGAAGGCAGTGTATAACATTGCACTGAAAGAAAGTTTCCAGTTCAAGACTGTTAAATCTAACAGCAGGCAGTT
TAAGATGGAGCAAATTATCCCCTCAATTAGGAGTGAGCTAGAGGAGGTAGGGTATGCGCGTTGGTCCCGTGCATTCTCCACGAGCCAACGGTATGTATTGATGGCCACTA
ATGTCTCTGAGAGCCTAAACGCTTTTTTGATTGAGGCTGGTGGACTACCTATAATTCCACTGTTGGAGTTTATAAGGGATTTTTTACAACGATGGTTTTATGAGAGGAGG
AACCATGCAAGCTTCCAAATGACTACGGTTACTGACTATGCAGTGGGAGAAATACAAGATGCTTTGAAAGCAAGCCGCACTATGGATATATACCCCGTCGACCGTGTGCA
GTTCCAAGTTCACGACCAGAACAAGCAATTCGAGGTAAACATCACCAATCAGAGTTGTACGTGCAGGAGGTGGGAGTCGGATCTTATCCCGTGCGTTCATGCTTGCATAG
CTATTTGTCGCAAAGGTTTGAACATTGATACGATTGTTCACGAGTTTTATCGGAACTCAAACCTGCAAAAGATGTATAGCGTGAACGTGCACCTCATTGGCTCTATGAGG
CAAGACATTTCCACATCAACGGTTGAAGTGAACATAGTCCACCCGACCGTTTCAAAACGTGGTGCTGGGAGGCCAAAAAAGAAGAGGATTGGGCCCCAAAGCGAGAGGGT
TCAGACTCAAAGTTGTGGGCGGTGTGGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACGACAATTCAACAGGTGACGATTTTGTTTGGTGGTGTCTGGAGTGCTGAGGGTATTTACAGCGAATTCAAGTCCGGAAGTGTGGATGTTAGGAGCTGGTTGAATAA
CCCAATTAATATAATCATTTCCGAGGACAGAGATGTTTCTTGGATGATCAACAGATTTCAAAATGGTACATATAGGGGGTGCTGTGTAGTCGCTAACATTCTGGGTGTCC
ATACTGGTATACACACCATGGGGACAGGCGTAGGCCCATCTCGTGGGGACAGGAATTTTGATTTTATCAACGCGGATGGTATCGAAAATGCTCTAGACAATGCTACTGTA
TCGGAGGGGTGCACATTTGCCTGCAAAGATCATCTTAAGAAGGCAGTGTATAACATTGCACTGAAAGAAAGTTTCCAGTTCAAGACTGTTAAATCTAACAGCAGGCAGTT
TAAGATGGAGCAAATTATCCCCTCAATTAGGAGTGAGCTAGAGGAGGTAGGGTATGCGCGTTGGTCCCGTGCATTCTCCACGAGCCAACGGTATGTATTGATGGCCACTA
ATGTCTCTGAGAGCCTAAACGCTTTTTTGATTGAGGCTGGTGGACTACCTATAATTCCACTGTTGGAGTTTATAAGGGATTTTTTACAACGATGGTTTTATGAGAGGAGG
AACCATGCAAGCTTCCAAATGACTACGGTTACTGACTATGCAGTGGGAGAAATACAAGATGCTTTGAAAGCAAGCCGCACTATGGATATATACCCCGTCGACCGTGTGCA
GTTCCAAGTTCACGACCAGAACAAGCAATTCGAGGTAAACATCACCAATCAGAGTTGTACGTGCAGGAGGTGGGAGTCGGATCTTATCCCGTGCGTTCATGCTTGCATAG
CTATTTGTCGCAAAGGTTTGAACATTGATACGATTGTTCACGAGTTTTATCGGAACTCAAACCTGCAAAAGATGTATAGCGTGAACGTGCACCTCATTGGCTCTATGAGG
CAAGACATTTCCACATCAACGGTTGAAGTGAACATAGTCCACCCGACCGTTTCAAAACGTGGTGCTGGGAGGCCAAAAAAGAAGAGGATTGGGCCCCAAAGCGAGAGGGT
TCAGACTCAAAGTTGTGGGCGGTGTGGGTAG
Protein sequenceShow/hide protein sequence
MTTIQQVTILFGGVWSAEGIYSEFKSGSVDVRSWLNNPINIIISEDRDVSWMINRFQNGTYRGCCVVANILGVHTGIHTMGTGVGPSRGDRNFDFINADGIENALDNATV
SEGCTFACKDHLKKAVYNIALKESFQFKTVKSNSRQFKMEQIIPSIRSELEEVGYARWSRAFSTSQRYVLMATNVSESLNAFLIEAGGLPIIPLLEFIRDFLQRWFYERR
NHASFQMTTVTDYAVGEIQDALKASRTMDIYPVDRVQFQVHDQNKQFEVNITNQSCTCRRWESDLIPCVHACIAICRKGLNIDTIVHEFYRNSNLQKMYSVNVHLIGSMR
QDISTSTVEVNIVHPTVSKRGAGRPKKKRIGPQSERVQTQSCGRCG