CuGenDBv2

Gene ID	Spg020281
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	nucleolar GTP-binding protein 1 isoform X1
Genome location	scaffold1:23067050..23074469
RNA-Seq Expression	Spg020281
Synteny	Spg020281
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0005525 - GTP binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0049101.1 nucleolar GTP-binding protein 1 isoform X1 [Cucumis melo var. makuwa]

2.1e-18

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Query:  LSISTENRDHDDVELERYRRFGPDGALLVSVKNDVGLYQLKEKVHEMLVSQMTRIKEQ-KATEET
        ++ STEN DHDD+EL +YRRFGPDGALLVSVK+D+GL +LKE+VHEMLVSQMTRIKEQ KATEET
Subjt:  LSISTENRDHDDVELERYRRFGPDGALLVSVKNDVGLYQLKEKVHEMLVSQMTRIKEQ-KATEET

XP_008438254.1 PREDICTED: nucleolar GTP-binding protein 1 isoform X1 [Cucumis melo]

2.1e-18

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Query:  LSISTENRDHDDVELERYRRFGPDGALLVSVKNDVGLYQLKEKVHEMLVSQMTRIKEQK-ATEET
        ++ STEN DHDD+EL +YRRFGPDGALLVSVK+D+GL +LKE+VHEMLVSQMTRIKEQK ATEET
Subjt:  LSISTENRDHDDVELERYRRFGPDGALLVSVKNDVGLYQLKEKVHEMLVSQMTRIKEQK-ATEET

XP_011650833.1 nucleolar GTP-binding protein 1 [Cucumis sativus]

1.3e-20

82.81

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Query:  LSISTENRDHDDVELERYRRFGPDGALLVSVKNDVGLYQLKEKVHEMLVSQMTRIKEQKATEET
        ++ STEN DHDD+EL++YRRFGPDGALLVSVKND+GL +LKE+VHEMLVSQMTRIKEQKATEET
Subjt:  LSISTENRDHDDVELERYRRFGPDGALLVSVKNDVGLYQLKEKVHEMLVSQMTRIKEQKATEET

XP_038878008.1 nucleolar GTP-binding protein 1 isoform X1 [Benincasa hispida]

1.5e-19

85.25

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Query:  STENRDHDDVELERYRRFGPDGALLVSVKNDVGLYQLKEKVHEMLVSQMTRIKEQKATEET
        STEN D+DD+EL+RYRRFGPDGALLVSVKND+GL +LKEKVHEMLVSQM+R+KEQKATEET
Subjt:  STENRDHDDVELERYRRFGPDGALLVSVKNDVGLYQLKEKVHEMLVSQMTRIKEQKATEET

XP_038878009.1 nucleolar GTP-binding protein 1 isoform X2 [Benincasa hispida]

1.5e-19

85.25

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Query:  STENRDHDDVELERYRRFGPDGALLVSVKNDVGLYQLKEKVHEMLVSQMTRIKEQKATEET
        STEN D+DD+EL+RYRRFGPDGALLVSVKND+GL +LKEKVHEMLVSQM+R+KEQKATEET
Subjt:  STENRDHDDVELERYRRFGPDGALLVSVKNDVGLYQLKEKVHEMLVSQMTRIKEQKATEET

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L3Y7 Uncharacterized protein

6.4e-21

82.81

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Query:  LSISTENRDHDDVELERYRRFGPDGALLVSVKNDVGLYQLKEKVHEMLVSQMTRIKEQKATEET
        ++ STEN DHDD+EL++YRRFGPDGALLVSVKND+GL +LKE+VHEMLVSQMTRIKEQKATEET
Subjt:  LSISTENRDHDDVELERYRRFGPDGALLVSVKNDVGLYQLKEKVHEMLVSQMTRIKEQKATEET

A0A1S3AVY3 nucleolar GTP-binding protein 1 isoform X2

1.0e-18

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Query:  LSISTENRDHDDVELERYRRFGPDGALLVSVKNDVGLYQLKEKVHEMLVSQMTRIKEQK-ATEET
        ++ STEN DHDD+EL +YRRFGPDGALLVSVK+D+GL +LKE+VHEMLVSQMTRIKEQK ATEET
Subjt:  LSISTENRDHDDVELERYRRFGPDGALLVSVKNDVGLYQLKEKVHEMLVSQMTRIKEQK-ATEET

A0A1S3AW19 nucleolar GTP-binding protein 1 isoform X1

1.0e-18

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Query:  LSISTENRDHDDVELERYRRFGPDGALLVSVKNDVGLYQLKEKVHEMLVSQMTRIKEQK-ATEET
        ++ STEN DHDD+EL +YRRFGPDGALLVSVK+D+GL +LKE+VHEMLVSQMTRIKEQK ATEET
Subjt:  LSISTENRDHDDVELERYRRFGPDGALLVSVKNDVGLYQLKEKVHEMLVSQMTRIKEQK-ATEET

A0A5A7U651 Nucleolar GTP-binding protein 1 isoform X1

1.0e-18

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Query:  LSISTENRDHDDVELERYRRFGPDGALLVSVKNDVGLYQLKEKVHEMLVSQMTRIKEQ-KATEET
        ++ STEN DHDD+EL +YRRFGPDGALLVSVK+D+GL +LKE+VHEMLVSQMTRIKEQ KATEET
Subjt:  LSISTENRDHDDVELERYRRFGPDGALLVSVKNDVGLYQLKEKVHEMLVSQMTRIKEQ-KATEET

A0A5D3D0V3 Nucleolar GTP-binding protein 1 isoform X1

1.0e-18

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Query:  LSISTENRDHDDVELERYRRFGPDGALLVSVKNDVGLYQLKEKVHEMLVSQMTRIKEQ-KATEET
        ++ STEN DHDD+EL +YRRFGPDGALLVSVK+D+GL +LKE+VHEMLVSQMTRIKEQ KATEET
Subjt:  LSISTENRDHDDVELERYRRFGPDGALLVSVKNDVGLYQLKEKVHEMLVSQMTRIKEQ-KATEET

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G80770.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein

4.0e-07

44.07

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Query:  ENRDHDDVELERYRRFGPDGALLVSVKNDVGLYQLKEKVHEMLVSQMTRIKEQKATEET
        E+R  DD E+ +YR  GPD ++ VSVK + GL +LK KV E+L S+M +I+  + T+++
Subjt:  ENRDHDDVELERYRRFGPDGALLVSVKNDVGLYQLKEKVHEMLVSQMTRIKEQKATEET

AT1G80770.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein

4.0e-07

44.07

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Query:  ENRDHDDVELERYRRFGPDGALLVSVKNDVGLYQLKEKVHEMLVSQMTRIKEQKATEET
        E+R  DD E+ +YR  GPD ++ VSVK + GL +LK KV E+L S+M +I+  + T+++
Subjt:  ENRDHDDVELERYRRFGPDGALLVSVKNDVGLYQLKEKVHEMLVSQMTRIKEQKATEET

Sequences

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CDS sequence

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ATGGGACTGAAGATTGTAATCGTTGGGGATATTGAACTCAAGGCACAGCAACAAGAAGAAGGCAAACGTGAGAAGACGACGGCGCTGAGAATCGACGACGGAATCGAGCT
GATTCCTTTTATAGGTTTAGGTTTGAATTCTGGGTTTTTTGTCTGTCAAACGATGCGTCTCGACCGGGATGCTTGGAGTGAAACTGAGACTGGGACCGGAAAATACAATT
TTGTGAAGAAAATGTTTTTCCCGTGCCCTATCCCTGTCGGGTTATCCGACCGAGATTCTCGATTGTCTCGCTCAGCAGAGTCTTATAAGGAGAGTTTGTATGGTAAACAA
GAGACGTATAGTCTTTACAGCTTCCTATACGCGTTTCAGGTATGGATGTATGAGATTGTTTCGTCATTAACTGGACGCGTTGCTAACCGCATGAGCAATAATTCCATCCC
ACGAATTCTCAAATGGTCATGTTCCCGCTCGTCCACTTTCACAGTGCTCAGTAGAGAGGTTTCTGCATCTGGCGCGCTGGCAATGCATCCAATGTCAACACCGCTTGATG
CATCGAAAGAAGAACAGGGGAATTCACCTCGGTGCTATTTGTACATGATCTCTCTGGAGAATGTGGCACTTCACCTTTCGATCAGCACAGAAAACCGTGATCATGACGAT
GTTGAACTAGAAAGGTACAGGCGATTCGGACCCGATGGAGCCTTGTTGGTATCTGTTAAGAATGATGTAGGACTCTACCAGTTGAAAGAAAAAGTACATGAAATGCTGGT
TTCTCAGATGACTCGAATCAAAGAACAAAAGGCAACTGAGGAAACATGA

mRNA sequence

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Protein sequence

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MGLKIVIVGDIELKAQQQEEGKREKTTALRIDDGIELIPFIGLGLNSGFFVCQTMRLDRDAWSETETGTGKYNFVKKMFFPCPIPVGLSDRDSRLSRSAESYKESLYGKQ
ETYSLYSFLYAFQVWMYEIVSSLTGRVANRMSNNSIPRILKWSCSRSSTFTVLSREVSASGALAMHPMSTPLDASKEEQGNSPRCYLYMISLENVALHLSISTENRDHDD
VELERYRRFGPDGALLVSVKNDVGLYQLKEKVHEMLVSQMTRIKEQKATEET

Spg020281 (gene) of Sponge gourd (cylindrica) v1 genome