CuGenDBv2

Gene ID	Spg020295
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	protein cornichon homolog 1 isoform X2
Genome location	scaffold1:27237428..27241488
RNA-Seq Expression	Spg020295
Synteny	Spg020295
Gene Ontology terms	GO:0016192 - vesicle-mediated transport (biological process) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR003377 - Cornichon

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004144657.1 protein cornichon homolog 1 isoform X2 [Cucumis sativus]

1.6e-20

96.67

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Query:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRLTLSAFNSLSDEDDVLYLF
        FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFL+VIFRLTLSAFNSLSDEDDVL+LF
Subjt:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRLTLSAFNSLSDEDDVLYLF

XP_008442270.1 PREDICTED: protein cornichon homolog 1 isoform X2 [Cucumis melo]

4.7e-20

96.67

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Query:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRLTLSAFNSLSDEDDVLYLF
        FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRLTLSAFNSLSDED+VL+LF
Subjt:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRLTLSAFNSLSDEDDVLYLF

XP_022928681.1 protein cornichon homolog 1-like isoform X2 [Cucurbita moschata]

1.0e-19

93.33

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Query:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRLTLSAFNSLSDEDDVLYLF
        FLK+EHLIDVTEVFR LKREKYFRLAKLIFYLLLFL+VIFRLTLSAFNSLSDEDDVL+LF
Subjt:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRLTLSAFNSLSDEDDVLYLF

XP_023543606.1 protein cornichon homolog 1-like isoform X2 [Cucurbita pepo subsp. pepo]

1.0e-19

93.33

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Query:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRLTLSAFNSLSDEDDVLYLF
        FLK+EHLIDVTEVFR LKREKYFRLAKLIFYLLLFL+VIFRLTLSAFNSLSDEDDVL+LF
Subjt:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRLTLSAFNSLSDEDDVLYLF

XP_038883916.1 protein cornichon homolog 1 isoform X2 [Benincasa hispida]

1.2e-20

98.33

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Query:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRLTLSAFNSLSDEDDVLYLF
        FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRLTLSAFNSLSDEDDVL+LF
Subjt:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRLTLSAFNSLSDEDDVLYLF

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B4V0 protein cornichon homolog 1 isoform X2

2.3e-20

96.67

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Query:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRLTLSAFNSLSDEDDVLYLF
        FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRLTLSAFNSLSDED+VL+LF
Subjt:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRLTLSAFNSLSDEDDVLYLF

A0A6J1DFC9 protein cornichon homolog 1-like isoform X2

1.9e-19

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Query:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRLTLSAFNSLSDEDDVLYLF
        FLKREHLIDVTEVFR LKREKYFRL KLIFYLL+FLIVIFRLTLSAFNSLSDEDD+++LF
Subjt:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRLTLSAFNSLSDEDDVLYLF

A0A6J1EKZ6 protein cornichon homolog 1-like isoform X2

5.0e-20

93.33

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Query:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRLTLSAFNSLSDEDDVLYLF
        FLK+EHLIDVTEVFR LKREKYFRLAKLIFYLLLFL+VIFRLTLSAFNSLSDEDDVL+LF
Subjt:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRLTLSAFNSLSDEDDVLYLF

A0A6J1HS45 protein cornichon homolog 1-like isoform X2

6.6e-20

91.67

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Query:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRLTLSAFNSLSDEDDVLYLF
        FLK+EHLIDVTEVFR LKREKYFRLAKLIFYLLLFL+VIFRLTLSAFNSLSDEDD+L+LF
Subjt:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRLTLSAFNSLSDEDDVLYLF

A0A6J1HTX3 protein cornichon homolog 1-like isoform X1

3.3e-19

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Query:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRLTLSAFNSLSDEDDVLYLF
        FLKREHLIDVTEVF+ LKREKYFR AKLIFYLLLFL+VIFRLTLSAFN+LSDEDDVL+LF
Subjt:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRLTLSAFNSLSDEDDVLYLF

SwissProt top hits

e value

%identity

Alignment

Q9C7D7 Protein cornichon homolog 1

1.3e-09

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Query:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRLTLSAFNSLSDEDDVLYLF
        + +R +LIDVTEVFR +  EK  R  KL FY+ LF++V+FRLTLSA  S +++DD+L+LF
Subjt:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRLTLSAFNSLSDEDDVLYLF

Arabidopsis top hits

e value

%identity

Alignment

AT3G12180.1 Cornichon family protein

9.4e-11

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Query:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRLTLSAFNSLSDEDDVLYLF
        + +R +LIDVTEVFR +  EK  R  KL FY+ LF++V+FRLTLSA  S +++DD+L+LF
Subjt:  FLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRLTLSAFNSLSDEDDVLYLF

Sequences

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CDS sequence

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ATGACCTCTGTCGCATTGCTTCTTGATTTGAATGTAAGGGAGCTCCCTCAATTCAGATTTGAATCTATTCCACTATTCCAGTTCTTGAAGAGGGAGCATCTTATTGATGT
TACTGAGGTGTTTAGAGCTCTTAAACGTGAGAAGTATTTTCGTTTGGCCAAGCTTATCTTCTACTTGCTTCTGTTCCTCATAGTGATCTTCAGGCTCACTTTGTCTGCTT
TCAACTCTTTATCTGATGAAGACGATGTCCTGTATTTATTTTGA

mRNA sequence

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Protein sequence

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MTSVALLLDLNVRELPQFRFESIPLFQFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRLTLSAFNSLSDEDDVLYLF

Spg020295 (gene) of Sponge gourd (cylindrica) v1 genome