; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg020301 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020301
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionexosome complex component RRP43
Genome locationscaffold1:22547412..22551342
RNA-Seq ExpressionSpg020301
SyntenySpg020301
Gene Ontology termsNA
InterPro domainsIPR001247 - Exoribonuclease, phosphorolytic domain 1
IPR015847 - Exoribonuclease, phosphorolytic domain 2
IPR020568 - Ribosomal protein S5 domain 2-type fold
IPR027408 - PNPase/RNase PH domain superfamily
IPR036345 - Exoribonuclease, PH domain 2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7033523.1 Exosome complex component RRP43 [Cucurbita argyrosperma subsp. argyrosperma]1.4e-15284.48Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAK+GSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRRALALSFNHHLEIASCNE
        PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSH                       
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRRALALSFNHHLEIASCNE

Query:  LSYHLGKQRDVADKFLGFTHRVQIPVVALNDDGKVVFISEEEGGENFEKEPVNKEKRKLKLNCIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSS
                             +QIPVVALNDDGKVVF+SEEEGGENFEKE VNKE+RKLKLN +PFSLTCLLHKNYILADP AEEESVMETIVTVVLDSS
Subjt:  LSYHLGKQRDVADKFLGFTHRVQIPVVALNDDGKVVFISEEEGGENFEKEPVNKEKRKLKLNCIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSS

Query:  GQLVSFYKPGGSVLAYTSSVQDCVALTRQRLKELQMILDEAISGMEID
        GQLVSFYKPGGSVLAYTS+VQDCVALTRQR KELQMILDEAISGMEID
Subjt:  GQLVSFYKPGGSVLAYTSSVQDCVALTRQRLKELQMILDEAISGMEID

XP_008460772.1 PREDICTED: exosome complex component RRP43 isoform X1 [Cucumis melo]3.5e-15182.76Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLSS+MEVDAFRRLFPIQF+ERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPS+ESPDEGCIA+DFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRRALALSFNHHLEIASCNE
        PP+CSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSH                       
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRRALALSFNHHLEIASCNE

Query:  LSYHLGKQRDVADKFLGFTHRVQIPVVALNDDGKVVFISEEEGGENFEKEPVNKEKRKLKLNCIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSS
                             +QIPVVALNDDG+VVF+SEEEGGENFEKEPVNKEKRKLKLN +PFSLTCLLHK YILADP AEEESVMETIVTVVLDSS
Subjt:  LSYHLGKQRDVADKFLGFTHRVQIPVVALNDDGKVVFISEEEGGENFEKEPVNKEKRKLKLNCIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSS

Query:  GQLVSFYKPGGSVLAYTSSVQDCVALTRQRLKELQMILDEAISGMEID
        GQLVSFYKPGGSVLAYTS+VQDC+ALTRQR KELQ+ILDEAISGMEID
Subjt:  GQLVSFYKPGGSVLAYTSSVQDCVALTRQRLKELQMILDEAISGMEID

XP_022928740.1 exosome complex component RRP43 [Cucurbita moschata]2.4e-15284.48Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAK+GSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRRALALSFNHHLEIASCNE
        PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSH                       
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRRALALSFNHHLEIASCNE

Query:  LSYHLGKQRDVADKFLGFTHRVQIPVVALNDDGKVVFISEEEGGENFEKEPVNKEKRKLKLNCIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSS
                             +QIP VALNDDGKVVF+SEEEGGENFEKE VNKEKRKLKLN +PFSLTCLLHKNYILADP AEEESVMETIVTVVLDSS
Subjt:  LSYHLGKQRDVADKFLGFTHRVQIPVVALNDDGKVVFISEEEGGENFEKEPVNKEKRKLKLNCIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSS

Query:  GQLVSFYKPGGSVLAYTSSVQDCVALTRQRLKELQMILDEAISGMEID
        GQLVSFYKPGGSVLAYTS+VQDCVALTRQR KELQMILDEAISGMEID
Subjt:  GQLVSFYKPGGSVLAYTSSVQDCVALTRQRLKELQMILDEAISGMEID

XP_022967860.1 exosome complex component RRP43 [Cucurbita maxima]1.6e-15184.2Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAK+GSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRRALALSFNHHLEIASCNE
        P ICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSH                       
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRRALALSFNHHLEIASCNE

Query:  LSYHLGKQRDVADKFLGFTHRVQIPVVALNDDGKVVFISEEEGGENFEKEPVNKEKRKLKLNCIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSS
                             +QIPVVALNDDGKVVF+SEE+GGENFEKE VNKEKRKLKLN +PFSLTCLLHKNYILADP AEEESVMETIVTVVLDSS
Subjt:  LSYHLGKQRDVADKFLGFTHRVQIPVVALNDDGKVVFISEEEGGENFEKEPVNKEKRKLKLNCIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSS

Query:  GQLVSFYKPGGSVLAYTSSVQDCVALTRQRLKELQMILDEAISGMEID
        GQLVSFYKPGGSVLAYTS+VQDCVALTRQR KELQMILDEAISGMEID
Subjt:  GQLVSFYKPGGSVLAYTSSVQDCVALTRQRLKELQMILDEAISGMEID

XP_023544252.1 exosome complex component RRP43 [Cucurbita pepo subsp. pepo]6.4e-15384.77Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAK+GSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRRALALSFNHHLEIASCNE
        PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSH                       
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRRALALSFNHHLEIASCNE

Query:  LSYHLGKQRDVADKFLGFTHRVQIPVVALNDDGKVVFISEEEGGENFEKEPVNKEKRKLKLNCIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSS
                             +QIPVVALNDDGKVVF+SEEEGGENFEKE VNKEKRKLKLN +PFSLTCLLHKNYILADP AEEESVMETIVTVVLDSS
Subjt:  LSYHLGKQRDVADKFLGFTHRVQIPVVALNDDGKVVFISEEEGGENFEKEPVNKEKRKLKLNCIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSS

Query:  GQLVSFYKPGGSVLAYTSSVQDCVALTRQRLKELQMILDEAISGMEID
        GQLVSFYKPGGSVLAYTS+VQDCVALTRQR KELQMILDEAISGMEID
Subjt:  GQLVSFYKPGGSVLAYTSSVQDCVALTRQRLKELQMILDEAISGMEID

TrEMBL top hitse value%identityAlignment
A0A1S3CD66 exosome complex component RRP43 isoform X11.7e-15182.76Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLSS+MEVDAFRRLFPIQF+ERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPS+ESPDEGCIA+DFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRRALALSFNHHLEIASCNE
        PP+CSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSH                       
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRRALALSFNHHLEIASCNE

Query:  LSYHLGKQRDVADKFLGFTHRVQIPVVALNDDGKVVFISEEEGGENFEKEPVNKEKRKLKLNCIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSS
                             +QIPVVALNDDG+VVF+SEEEGGENFEKEPVNKEKRKLKLN +PFSLTCLLHK YILADP AEEESVMETIVTVVLDSS
Subjt:  LSYHLGKQRDVADKFLGFTHRVQIPVVALNDDGKVVFISEEEGGENFEKEPVNKEKRKLKLNCIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSS

Query:  GQLVSFYKPGGSVLAYTSSVQDCVALTRQRLKELQMILDEAISGMEID
        GQLVSFYKPGGSVLAYTS+VQDC+ALTRQR KELQ+ILDEAISGMEID
Subjt:  GQLVSFYKPGGSVLAYTSSVQDCVALTRQRLKELQMILDEAISGMEID

A0A1S3CEE1 exosome complex component RRP43 isoform X21.7e-15182.76Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLSS+MEVDAFRRLFPIQF+ERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPS+ESPDEGCIA+DFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRRALALSFNHHLEIASCNE
        PP+CSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSH                       
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRRALALSFNHHLEIASCNE

Query:  LSYHLGKQRDVADKFLGFTHRVQIPVVALNDDGKVVFISEEEGGENFEKEPVNKEKRKLKLNCIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSS
                             +QIPVVALNDDG+VVF+SEEEGGENFEKEPVNKEKRKLKLN +PFSLTCLLHK YILADP AEEESVMETIVTVVLDSS
Subjt:  LSYHLGKQRDVADKFLGFTHRVQIPVVALNDDGKVVFISEEEGGENFEKEPVNKEKRKLKLNCIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSS

Query:  GQLVSFYKPGGSVLAYTSSVQDCVALTRQRLKELQMILDEAISGMEID
        GQLVSFYKPGGSVLAYTS+VQDC+ALTRQR KELQ+ILDEAISGMEID
Subjt:  GQLVSFYKPGGSVLAYTSSVQDCVALTRQRLKELQMILDEAISGMEID

A0A6J1DFM7 exosome complex component RRP431.4e-15082.47Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLSSEMEVDAFRRLFP+QF+ERH AESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIA+DFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRRALALSFNHHLEIASCNE
        PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSH                       
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRRALALSFNHHLEIASCNE

Query:  LSYHLGKQRDVADKFLGFTHRVQIPVVALNDDGKVVFISEEEGGENFEKEPVNKEKRKLKLNCIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSS
                             +QIPVVALNDDGKVVF+SEEEGGENFEKEPVNKEKRKLKL+ IPFSLTC+LHKN+ILADP AEEES+METIVTVVLD S
Subjt:  LSYHLGKQRDVADKFLGFTHRVQIPVVALNDDGKVVFISEEEGGENFEKEPVNKEKRKLKLNCIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSS

Query:  GQLVSFYKPGGSVLAYTSSVQDCVALTRQRLKELQMILDEAISGMEID
        GQLVSFYKPGGSVLA+TS+VQDCVALTRQR+KELQ+ILDEAISGMEID
Subjt:  GQLVSFYKPGGSVLAYTSSVQDCVALTRQRLKELQMILDEAISGMEID

A0A6J1ESF5 exosome complex component RRP431.2e-15284.48Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAK+GSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRRALALSFNHHLEIASCNE
        PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSH                       
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRRALALSFNHHLEIASCNE

Query:  LSYHLGKQRDVADKFLGFTHRVQIPVVALNDDGKVVFISEEEGGENFEKEPVNKEKRKLKLNCIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSS
                             +QIP VALNDDGKVVF+SEEEGGENFEKE VNKEKRKLKLN +PFSLTCLLHKNYILADP AEEESVMETIVTVVLDSS
Subjt:  LSYHLGKQRDVADKFLGFTHRVQIPVVALNDDGKVVFISEEEGGENFEKEPVNKEKRKLKLNCIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSS

Query:  GQLVSFYKPGGSVLAYTSSVQDCVALTRQRLKELQMILDEAISGMEID
        GQLVSFYKPGGSVLAYTS+VQDCVALTRQR KELQMILDEAISGMEID
Subjt:  GQLVSFYKPGGSVLAYTSSVQDCVALTRQRLKELQMILDEAISGMEID

A0A6J1HVL5 exosome complex component RRP437.6e-15284.2Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAK+GSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRRALALSFNHHLEIASCNE
        P ICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSH                       
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRRALALSFNHHLEIASCNE

Query:  LSYHLGKQRDVADKFLGFTHRVQIPVVALNDDGKVVFISEEEGGENFEKEPVNKEKRKLKLNCIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSS
                             +QIPVVALNDDGKVVF+SEE+GGENFEKE VNKEKRKLKLN +PFSLTCLLHKNYILADP AEEESVMETIVTVVLDSS
Subjt:  LSYHLGKQRDVADKFLGFTHRVQIPVVALNDDGKVVFISEEEGGENFEKEPVNKEKRKLKLNCIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSS

Query:  GQLVSFYKPGGSVLAYTSSVQDCVALTRQRLKELQMILDEAISGMEID
        GQLVSFYKPGGSVLAYTS+VQDCVALTRQR KELQMILDEAISGMEID
Subjt:  GQLVSFYKPGGSVLAYTSSVQDCVALTRQRLKELQMILDEAISGMEID

SwissProt top hitse value%identityAlignment
Q10205 Exosome complex component rrp434.7e-2626.37Show/hide
Query:  FRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV
        F+++ P Q+    L + +R DGR++ + R+  I    +S+ANGSA+ + G    +  IK E+  P   SP+EG I  +  + P+CS   +PG P++ A V
Subjt:  FRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV

Query:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRRALALSFNHHLEIASCNELSYHLGKQRDVADKFLGFT
        +S++L  T+  S +I+L+ L + + KAAW+ Y DI CL+ DGS FD A  +  AA                                             
Subjt:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRRALALSFNHHLEIASCNELSYHLGKQRDVADKFLGFT

Query:  HRVQIPVVALNDDGKVVFISEEEGGENFEKEPVNKEKRKLKLNCIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSS
          V++P    ++D + V  +             +   R ++L+    S +  +  + +LADP  EEE +    +T++L+SS  +V   K GG+ +     
Subjt:  HRVQIPVVALNDDGKVVFISEEEGGENFEKEPVNKEKRKLKLNCIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSS

Query:  VQDCVALTRQR
        ++ C+ + R +
Subjt:  VQDCVALTRQR

Q2KHU3 Exosome complex component RRP433.5e-3729.27Show/hide
Query:  FRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV
        F+ + P++++ R L E+ RPDGR LG+ R TT+ +G + +A+GSAL K+G+TT++  IK E   P  ++PD+G +  +  + P+CS   R G P E A V
Subjt:  FRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV

Query:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRRALALSFNHHLEIASCNELSYHLGKQRDVADKFLGFT
         S+ ++D I +S +I   +L +  GK AW+ Y D+ CL+ DG++ DA   +  AA  +                                          
Subjt:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRRALALSFNHHLEIASCNELSYHLGKQRDVADKFLGFT

Query:  HRVQIPVVALNDDGKVVFISEEEGGENFEKEPVNKEKRKLKLNCIPFSLT-CLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTS
          VQ+P V +N++  +  ++              K+K  L +   P + +  +     ++ DP  EEE +    +TVV+D  G+L   +KPGGS L   +
Subjt:  HRVQIPVVALNDDGKVVFISEEEGGENFEKEPVNKEKRKLKLNCIPFSLT-CLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTS

Query:  SVQDCVALTRQRLKELQMILDEAISGME
         +QDC++    R KE++ ++DE    M+
Subjt:  SVQDCVALTRQRLKELQMILDEAISGME

Q8TYC2 Exosome complex component Rrp421.1e-2529.15Show/hide
Query:  RPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLR
        R DGR   + R   +  G +S ANGSAL ++G+T ++  +K+EV  P  +SP+EG +AV+  + P+  P   PG P E A  +S+ +   I  S MIDL 
Subjt:  RPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLR

Query:  ELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRRALALSFNHHLEIASCNELSYHLGKQRDVADKFLGFTHRVQIPVVALNDDGKVVF
        EL + +G+  W+ ++DI+ LD DG+LFDA+++ + +A S +                                            ++P   + DD     
Subjt:  ELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRRALALSFNHHLEIASCNELSYHLGKQRDVADKFLGFTHRVQIPVVALNDDGKVVF

Query:  ISEEEGGENFEKEPVNKEKRKLKLNCIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYK
                  E E + ++   L +N  P S+T      Y+L DP  EEE +M+T +TV +  SG++ +  K
Subjt:  ISEEEGGENFEKEPVNKEKRKLKLNCIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYK

Q96B26 Exosome complex component RRP435.8e-4029.88Show/hide
Query:  FRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV
        F+ + P++++ R L E+ RPDGR LG+ R TT+ +G +S+A+GSAL K+G+TT++  +K E   PS ++PD+G +  +  +PP+CS   R G P E A V
Subjt:  FRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV

Query:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRRALALSFNHHLEIASCNELSYHLGKQRDVADKFLGFT
         S+ ++D I +S +I   +L +  GK  W+ Y D+ CLD DG++ DA   +  AA  +                                          
Subjt:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRRALALSFNHHLEIASCNELSYHLGKQRDVADKFLGFT

Query:  HRVQIPVVALNDDGKVVFISEEEGGENFEKEPVNKEKRKLKLNCIPFSLT-CLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTS
          VQ+P V +N++  +  ++              K+K  L +   P + +  +     ++ DP  EEE +    +T+V+D  G+L   +KPGGS L   +
Subjt:  HRVQIPVVALNDDGKVVFISEEEGGENFEKEPVNKEKRKLKLNCIPFSLT-CLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTS

Query:  SVQDCVALTRQRLKELQMILDEAISGME
         +QDC++    R KE++ ++DE I  M+
Subjt:  SVQDCVALTRQRLKELQMILDEAISGME

Q9D753 Exosome complex component RRP431.7e-3930.28Show/hide
Query:  FRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV
        F+ + P++++ R L E+ RPDGR LG+ R TT+ +G +S+A+GSAL K+G+TT++  +K E   P +++PD G +  +  +PP+CS   R G P E A V
Subjt:  FRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV

Query:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRRALALSFNHHLEIASCNELSYHLGKQRDVADKFLGFT
         S+ ++D + +S +I   +L +  GK AW+ Y D+ CLD DG++ DA   +  AA  +                                          
Subjt:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRRALALSFNHHLEIASCNELSYHLGKQRDVADKFLGFT

Query:  HRVQIPVVALNDDGKVVFISEEEGGENFEKEPVNKEKRKLKLNCIPFSLT-CLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTS
          VQ+P V +N++  +  ++              K+K  L +   P + +  +     ++ DP  EEE +    +TVV D  G+L   +KPGGS L   +
Subjt:  HRVQIPVVALNDDGKVVFISEEEGGENFEKEPVNKEKRKLKLNCIPFSLT-CLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTS

Query:  SVQDCVALTRQRLKELQMILDEAISGM
         +QDC++    R KE+  +LDE I  M
Subjt:  SVQDCVALTRQRLKELQMILDEAISGM

Arabidopsis top hitse value%identityAlignment
AT1G60080.1 3'-5'-exoribonuclease family protein7.8e-11764.1Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MG+P+AA  DLS+EMEVDAFRR+FP++FFERHL+ES+RPDGR LGKARDT + LG VS+A+GSALAKIGSTTMLAAI+MEVMTPS +SPDEGCIA++FHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRRALALSFNHHLEIASCNE
        PPICSP VRPGRPAEAAPVISK+LSDTI SSGMIDL+EL LV GKAAWM YLDIYCLDADG+LFDAALL+A AAFS+                       
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRRALALSFNHHLEIASCNE

Query:  LSYHLGKQRDVADKFLGFTHRVQIPVVALNDDGKVVFISEEEGGEN---FEKEPVNKEKRKLKLNCIPFSLTCLLHKNYILADPNAEEESVMETIVTVVL
                             +QIP+VALND+G++V ++ E+  +N    EKE VNKEKRKL L  IPFSLTC+LHKNYILADP  EEES+M+T+VTVVL
Subjt:  LSYHLGKQRDVADKFLGFTHRVQIPVVALNDDGKVVFISEEEGGEN---FEKEPVNKEKRKLKLNCIPFSLTCLLHKNYILADPNAEEESVMETIVTVVL

Query:  DSSGQLVSFYKPGGSVLAYTSSVQDCVALTRQRLKELQMILDEAISGMEID
        DSS Q+VSFYK GG+ LAY+S+++ CV L R+R KEL+ IL E    M+ID
Subjt:  DSSGQLVSFYKPGGSVLAYTSSVQDCVALTRQRLKELQMILDEAISGMEID

AT3G07750.1 3'-5'-exoribonuclease family protein1.0e-1524.69Show/hide
Query:  FFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIV--RPGR--PAEAAPVISKQ
        F +  +A+ +R DGR     R   +  G +  ANGSA  +IG T ++A++K E+  PS   PD+G +AV     P   P    R G    +E A  + + 
Subjt:  FFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIV--RPGR--PAEAAPVISKQ

Query:  LSDTISSSGM-IDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRRALALSFNHHLEIASCNELSYHLGKQRDVADKFLGFTHRV
        L    S +G  I+L  L + +GK  W  Y+D   + +DG+L DA   +  AA +++A                                         +V
Subjt:  LSDTISSSGM-IDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRRALALSFNHHLEIASCNELSYHLGKQRDVADKFLGFTHRV

Query:  QIPVVALNDDGKVVFISEEEGGENFEKEPVNKEKRKLKLNCIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSSVQD
         +     +D+   + IS+E             E  +   + +P  +T      + + D  AEEES M + V++ ++ +G +    K  GS L   S + D
Subjt:  QIPVVALNDDGKVVFISEEEGGENFEKEPVNKEKRKLKLNCIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSSVQD

Query:  CVALTRQRLKELQMILDEAISGME
         +++ +   + L   LD  IS  E
Subjt:  CVALTRQRLKELQMILDEAISGME

AT3G07750.2 3'-5'-exoribonuclease family protein1.0e-1524.69Show/hide
Query:  FFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIV--RPGR--PAEAAPVISKQ
        F +  +A+ +R DGR     R   +  G +  ANGSA  +IG T ++A++K E+  PS   PD+G +AV     P   P    R G    +E A  + + 
Subjt:  FFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIV--RPGR--PAEAAPVISKQ

Query:  LSDTISSSGM-IDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRRALALSFNHHLEIASCNELSYHLGKQRDVADKFLGFTHRV
        L    S +G  I+L  L + +GK  W  Y+D   + +DG+L DA   +  AA +++A                                         +V
Subjt:  LSDTISSSGM-IDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRRALALSFNHHLEIASCNELSYHLGKQRDVADKFLGFTHRV

Query:  QIPVVALNDDGKVVFISEEEGGENFEKEPVNKEKRKLKLNCIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSSVQD
         +     +D+   + IS+E             E  +   + +P  +T      + + D  AEEES M + V++ ++ +G +    K  GS L   S + D
Subjt:  QIPVVALNDDGKVVFISEEEGGENFEKEPVNKEKRKLKLNCIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSSVQD

Query:  CVALTRQRLKELQMILDEAISGME
         +++ +   + L   LD  IS  E
Subjt:  CVALTRQRLKELQMILDEAISGME


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACTGCCAAATGCTGCTTCCGGGGACTTGTCGTCGGAGATGGAGGTTGATGCTTTTAGACGACTCTTCCCAATTCAGTTTTTTGAGCGCCATCTTGCTGAATCAAT
ACGTCCCGATGGAAGAGCATTGGGAAAAGCTAGAGATACAACCATTGCTCTTGGACCAGTATCATCTGCGAATGGGTCAGCCCTGGCTAAGATTGGTTCTACGACAATGT
TGGCCGCTATTAAAATGGAAGTAATGACGCCTTCCATAGAGTCACCGGATGAGGGTTGTATAGCTGTTGACTTTCATATGCCTCCAATATGCTCTCCCATTGTTAGGCCT
GGGAGACCAGCTGAAGCAGCACCTGTGATTTCAAAGCAGTTGTCTGATACTATTTCAAGTTCTGGGATGATTGATTTGAGAGAATTATCTCTTGTTAAAGGAAAAGCTGC
TTGGATGGCATACCTGGATATTTATTGCTTGGATGCTGATGGATCTCTTTTCGATGCTGCACTTCTTTCTGCAGCTGCTGCATTTTCTCACTCTGCACAAATTCGAAGGG
CTTTGGCCTTGTCTTTTAACCACCATCTTGAGATTGCTTCGTGCAACGAATTATCATACCATTTAGGCAAGCAAAGAGATGTTGCTGACAAATTTCTAGGCTTCACCCAC
CGGGTGCAAATCCCCGTTGTTGCTCTAAATGATGATGGAAAAGTAGTATTTATCTCTGAAGAAGAAGGGGGAGAAAACTTTGAGAAGGAACCTGTCAACAAAGAGAAAAG
GAAACTGAAATTGAACTGTATTCCTTTCTCATTAACATGCCTACTCCACAAGAACTATATCTTGGCAGACCCTAATGCAGAGGAGGAGTCTGTCATGGAAACTATTGTGA
CCGTGGTTTTAGATTCATCTGGTCAACTGGTGTCCTTCTACAAGCCGGGTGGATCCGTTCTTGCCTACACATCATCTGTTCAGGATTGTGTTGCATTGACAAGACAAAGA
TTGAAAGAACTACAGATGATTTTAGATGAAGCAATTTCTGGTATGGAAATTGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGACTGCCAAATGCTGCTTCCGGGGACTTGTCGTCGGAGATGGAGGTTGATGCTTTTAGACGACTCTTCCCAATTCAGTTTTTTGAGCGCCATCTTGCTGAATCAAT
ACGTCCCGATGGAAGAGCATTGGGAAAAGCTAGAGATACAACCATTGCTCTTGGACCAGTATCATCTGCGAATGGGTCAGCCCTGGCTAAGATTGGTTCTACGACAATGT
TGGCCGCTATTAAAATGGAAGTAATGACGCCTTCCATAGAGTCACCGGATGAGGGTTGTATAGCTGTTGACTTTCATATGCCTCCAATATGCTCTCCCATTGTTAGGCCT
GGGAGACCAGCTGAAGCAGCACCTGTGATTTCAAAGCAGTTGTCTGATACTATTTCAAGTTCTGGGATGATTGATTTGAGAGAATTATCTCTTGTTAAAGGAAAAGCTGC
TTGGATGGCATACCTGGATATTTATTGCTTGGATGCTGATGGATCTCTTTTCGATGCTGCACTTCTTTCTGCAGCTGCTGCATTTTCTCACTCTGCACAAATTCGAAGGG
CTTTGGCCTTGTCTTTTAACCACCATCTTGAGATTGCTTCGTGCAACGAATTATCATACCATTTAGGCAAGCAAAGAGATGTTGCTGACAAATTTCTAGGCTTCACCCAC
CGGGTGCAAATCCCCGTTGTTGCTCTAAATGATGATGGAAAAGTAGTATTTATCTCTGAAGAAGAAGGGGGAGAAAACTTTGAGAAGGAACCTGTCAACAAAGAGAAAAG
GAAACTGAAATTGAACTGTATTCCTTTCTCATTAACATGCCTACTCCACAAGAACTATATCTTGGCAGACCCTAATGCAGAGGAGGAGTCTGTCATGGAAACTATTGTGA
CCGTGGTTTTAGATTCATCTGGTCAACTGGTGTCCTTCTACAAGCCGGGTGGATCCGTTCTTGCCTACACATCATCTGTTCAGGATTGTGTTGCATTGACAAGACAAAGA
TTGAAAGAACTACAGATGATTTTAGATGAAGCAATTTCTGGTATGGAAATTGACTAA
Protein sequenceShow/hide protein sequence
MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRP
GRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRRALALSFNHHLEIASCNELSYHLGKQRDVADKFLGFTH
RVQIPVVALNDDGKVVFISEEEGGENFEKEPVNKEKRKLKLNCIPFSLTCLLHKNYILADPNAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSSVQDCVALTRQR
LKELQMILDEAISGMEID