; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg020306 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020306
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold1:22562751..22564130
RNA-Seq ExpressionSpg020306
SyntenySpg020306
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN65484.1 hypothetical protein VITISV_029474 [Vitis vinifera]7.1e-4527.19Show/hide
Query:  MALMMGCKAKNLPFNYLGVTVRGRPNKESFWDAVQETIRSKLALWK----------------------------------GKKIEKSFRRFLWKGADDSK
        +A M+ CKA   P  YLG+ + G P    FWD V E I  +L  W+                                    KIE+  R FLW G  + K
Subjt:  MALMMGCKAKNLPFNYLGVTVRGRPNKESFWDAVQETIRSKLALWK----------------------------------GKKIEKSFRRFLWKGADDSK

Query:  GSHLVNWDHVTNPKSLGRLGIDNIRVKNMALLTKWLWRFGREPKAMWRKIIKS---SHREGFIRDHLSYKKWKSYSSSWKDIASLAGFYKSNSKYKVGRG
          HLVNWD V  PKS G LG   I ++N+ALL KWLWR+ RE  A+W ++I S   SH  G+  D  +  +W S+   WK IA +   +   +++ VG G
Subjt:  GSHLVNWDHVTNPKSLGRLGIDNIRVKNMALLTKWLWRFGREPKAMWRKIIKS---SHREGFIRDHLSYKKWKSYSSSWKDIASLAGFYKSNSKYKVGRG

Query:  EKVMFWEDTWVSERPLKESFPRMYRLSMAKGARVTL----------------------------------------------------------------
        +++ FW+D W  E+PL   +PR+ R+   K A ++                                                                 
Subjt:  EKVMFWEDTWVSERPLKESFPRMYRLSMAKGARVTL----------------------------------------------------------------

Query:  ----------------------------------KSINTMEKVQTRFPGLQISPSICVMCLKSEETASHLSLHCEFADKVWNRFAEAFGQEGCKPKCMVN
                                          K +NT + +Q R P   +SP IC +C+K  ET  HL LHC     +W+R  ++   +   P+ + +
Subjt:  ----------------------------------KSINTMEKVQTRFPGLQISPSICVMCLKSEETASHLSLHCEFADKVWNRFAEAFGQEGCKPKCMVN

Query:  WLSEVLTGGWLKDKARVLWRNFSRAIVWHLWKERNARVFADKFLSFDIFCDVV--QLSAWSVQDRIF
         LS    G     +  VLW+N   AI+W +W+ERNAR+F DK  + +   D +    S W+   ++F
Subjt:  WLSEVLTGGWLKDKARVLWRNFSRAIVWHLWKERNARVFADKFLSFDIFCDVV--QLSAWSVQDRIF

CAN72359.1 hypothetical protein VITISV_000131 [Vitis vinifera]2.7e-4426.77Show/hide
Query:  MALMMGCKAKNLPFNYLGVTVRGRPNKESFWDAVQETIRSKLALWK----------------------------------GKKIEKSFRRFLWKGADDSK
        +A M+ CKA   P  YLG+ + G P    FWD V E I  +L  W+                                    KIE+  R FLW G  + K
Subjt:  MALMMGCKAKNLPFNYLGVTVRGRPNKESFWDAVQETIRSKLALWK----------------------------------GKKIEKSFRRFLWKGADDSK

Query:  GSHLVNWDHVTNPKSLGRLGIDNIRVKNMALLTKWLWRFGREPKAMWRKIIKS---SHREGFIRDHLSYKKWKSYSSSWKDIASLAGFYKSNSKYKVGRG
          HLVNWD V  PKS G LG   I ++N+ALL KWLWR+ RE  A+W ++I S   SH  G+  D  +  +W S+   WK IA +   +   +++ VG G
Subjt:  GSHLVNWDHVTNPKSLGRLGIDNIRVKNMALLTKWLWRFGREPKAMWRKIIKS---SHREGFIRDHLSYKKWKSYSSSWKDIASLAGFYKSNSKYKVGRG

Query:  EKVMFWEDTWVSERPLKESFPRMYRLSMAKGARVTL----------------------------------------------------------------
        +++ FW+D W  E+PL   +PR+ R+   K A ++                                                                 
Subjt:  EKVMFWEDTWVSERPLKESFPRMYRLSMAKGARVTL----------------------------------------------------------------

Query:  ----------------------------------KSINTMEKVQTRFPGLQISPSICVMCLKSEETASHLSLHCEFADKVWNRFAEAFGQEGCKPKCMVN
                                          K +NT + +Q R P   +SP IC +C+K  ET  HL LHC     +W+R  ++   +   P+ + +
Subjt:  ----------------------------------KSINTMEKVQTRFPGLQISPSICVMCLKSEETASHLSLHCEFADKVWNRFAEAFGQEGCKPKCMVN

Query:  WLSEVLTGGWLKDKARVLWRNFSRAIVWHLWKERNARVFADKFLSFDIFCDVV--QLSAWSVQDRIF
         L+    G     +  VLW+N   A++W +W+ERNAR+F DK  + +   D +    S W+   ++F
Subjt:  WLSEVLTGGWLKDKARVLWRNFSRAIVWHLWKERNARVFADKFLSFDIFCDVV--QLSAWSVQDRIF

RVW34900.1 putative ribonuclease H protein [Vitis vinifera]7.9e-4428.78Show/hide
Query:  MALMMGCKAKNLPFNYLGVTVRGRPNKESFWDAVQETIRSKLALWK----------------------------------GKKIEKSFRRFLWKGADDSK
        +AL++ CKA + P  YLG+ + G P    FWD V E I  +L  W+                                    KIE+  R FLW G    K
Subjt:  MALMMGCKAKNLPFNYLGVTVRGRPNKESFWDAVQETIRSKLALWK----------------------------------GKKIEKSFRRFLWKGADDSK

Query:  GSHLVNWDHVTNPKSLGRLGIDNIRVKNMALLTKWLWRFGREPKAMWRKIIKS---SHREGFIRDHLSYKKWKSYSSSWKDIASLAGFYKSNSKYKVGRG
          HLV W+ V  P+ +G LGI  I ++N ALL KWLWRF RE  ++W ++I S   +H  G+  D  +  +W S+   WK IA     +   +++ VG G
Subjt:  GSHLVNWDHVTNPKSLGRLGIDNIRVKNMALLTKWLWRFGREPKAMWRKIIKS---SHREGFIRDHLSYKKWKSYSSSWKDIASLAGFYKSNSKYKVGRG

Query:  EKVMFWEDTWVSERPLKESFPRMYRL--------------------------SMAKGARVTLKS------------------------------------
        E++ FWED W  ++ LK+ +PR++R+                          S+      T+KS                                    
Subjt:  EKVMFWEDTWVSERPLKESFPRMYRL--------------------------SMAKGARVTLKS------------------------------------

Query:  ----INTMEKVQTRFPGLQISPSICVMCLKSEETASHLSLHCEFADKVWNRFAEAFGQEGCKPKCMVNWLSEVLTGGWLKDKARVLWRNFSRAIVWHLWK
            +NT + +Q R P   ISP IC +C++  E+A HL LHC     +W+R  +    +   PK + + +     G     +  +LW+N S A++W +W+
Subjt:  ----INTMEKVQTRFPGLQISPSICVMCLKSEETASHLSLHCEFADKVWNRFAEAFGQEGCKPKCMVNWLSEVLTGGWLKDKARVLWRNFSRAIVWHLWK

Query:  ERNARVFADK
        ERN R+F DK
Subjt:  ERNARVFADK

RVW70235.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]2.7e-4426.77Show/hide
Query:  MALMMGCKAKNLPFNYLGVTVRGRPNKESFWDAVQETIRSKLALWK----------------------------------GKKIEKSFRRFLWKGADDSK
        +A M+ CKA   P  YLG+ + G P    FWD V E I  +L  W+                                    KIE+  R FLW G  + K
Subjt:  MALMMGCKAKNLPFNYLGVTVRGRPNKESFWDAVQETIRSKLALWK----------------------------------GKKIEKSFRRFLWKGADDSK

Query:  GSHLVNWDHVTNPKSLGRLGIDNIRVKNMALLTKWLWRFGREPKAMWRKIIKS---SHREGFIRDHLSYKKWKSYSSSWKDIASLAGFYKSNSKYKVGRG
          HLVNWD V  PKS G LG   I ++N+ALL KWLWR+ RE  A+W ++I S   SH  G+  D  +  +W S+   WK IA +   +   +++ VG G
Subjt:  GSHLVNWDHVTNPKSLGRLGIDNIRVKNMALLTKWLWRFGREPKAMWRKIIKS---SHREGFIRDHLSYKKWKSYSSSWKDIASLAGFYKSNSKYKVGRG

Query:  EKVMFWEDTWVSERPLKESFPRMYRLSMAKGARVTL----------------------------------------------------------------
        +++ FW+D W  E+PL   +PR+ R+   K A ++                                                                 
Subjt:  EKVMFWEDTWVSERPLKESFPRMYRLSMAKGARVTL----------------------------------------------------------------

Query:  ----------------------------------KSINTMEKVQTRFPGLQISPSICVMCLKSEETASHLSLHCEFADKVWNRFAEAFGQEGCKPKCMVN
                                          K +NT + +Q R P   +SP IC +C+K  ET  HL LHC     +W+R  ++   +   P+ + +
Subjt:  ----------------------------------KSINTMEKVQTRFPGLQISPSICVMCLKSEETASHLSLHCEFADKVWNRFAEAFGQEGCKPKCMVN

Query:  WLSEVLTGGWLKDKARVLWRNFSRAIVWHLWKERNARVFADKFLSFDIFCDVV--QLSAWSVQDRIF
         L+    G     +  VLW+N   A++W +W+ERNAR+F DK  + +   D +    S W+   ++F
Subjt:  WLSEVLTGGWLKDKARVLWRNFSRAIVWHLWKERNARVFADKFLSFDIFCDVV--QLSAWSVQDRIF

RVW80860.1 putative ribonuclease H protein [Vitis vinifera]2.7e-4426.77Show/hide
Query:  MALMMGCKAKNLPFNYLGVTVRGRPNKESFWDAVQETIRSKLALWK----------------------------------GKKIEKSFRRFLWKGADDSK
        +A M+ CKA   P  YLG+ + G P    FWD V E I  +L  W+                                    KIE+  R FLW G  + K
Subjt:  MALMMGCKAKNLPFNYLGVTVRGRPNKESFWDAVQETIRSKLALWK----------------------------------GKKIEKSFRRFLWKGADDSK

Query:  GSHLVNWDHVTNPKSLGRLGIDNIRVKNMALLTKWLWRFGREPKAMWRKIIKS---SHREGFIRDHLSYKKWKSYSSSWKDIASLAGFYKSNSKYKVGRG
          HLVNWD V  PKS G LG   I ++N+ALL KWLWR+ RE  A+W ++I S   SH  G+  D  +  +W S+   WK IA +   +   +++ VG G
Subjt:  GSHLVNWDHVTNPKSLGRLGIDNIRVKNMALLTKWLWRFGREPKAMWRKIIKS---SHREGFIRDHLSYKKWKSYSSSWKDIASLAGFYKSNSKYKVGRG

Query:  EKVMFWEDTWVSERPLKESFPRMYRLSMAKGARVTL----------------------------------------------------------------
        +++ FW+D W  E+PL   +PR+ R+   K A ++                                                                 
Subjt:  EKVMFWEDTWVSERPLKESFPRMYRLSMAKGARVTL----------------------------------------------------------------

Query:  ----------------------------------KSINTMEKVQTRFPGLQISPSICVMCLKSEETASHLSLHCEFADKVWNRFAEAFGQEGCKPKCMVN
                                          K +NT + +Q R P   +SP IC +C+K  ET  HL LHC     +W+R  ++   +   P+ + +
Subjt:  ----------------------------------KSINTMEKVQTRFPGLQISPSICVMCLKSEETASHLSLHCEFADKVWNRFAEAFGQEGCKPKCMVN

Query:  WLSEVLTGGWLKDKARVLWRNFSRAIVWHLWKERNARVFADKFLSFDIFCDVV--QLSAWSVQDRIF
         L+    G     +  VLW+N   A++W +W+ERNAR+F DK  + +   D +    S W+   ++F
Subjt:  WLSEVLTGGWLKDKARVLWRNFSRAIVWHLWKERNARVFADKFLSFDIFCDVV--QLSAWSVQDRIF

TrEMBL top hitse value%identityAlignment
A0A438DHG1 Putative ribonuclease H protein3.8e-4428.78Show/hide
Query:  MALMMGCKAKNLPFNYLGVTVRGRPNKESFWDAVQETIRSKLALWK----------------------------------GKKIEKSFRRFLWKGADDSK
        +AL++ CKA + P  YLG+ + G P    FWD V E I  +L  W+                                    KIE+  R FLW G    K
Subjt:  MALMMGCKAKNLPFNYLGVTVRGRPNKESFWDAVQETIRSKLALWK----------------------------------GKKIEKSFRRFLWKGADDSK

Query:  GSHLVNWDHVTNPKSLGRLGIDNIRVKNMALLTKWLWRFGREPKAMWRKIIKS---SHREGFIRDHLSYKKWKSYSSSWKDIASLAGFYKSNSKYKVGRG
          HLV W+ V  P+ +G LGI  I ++N ALL KWLWRF RE  ++W ++I S   +H  G+  D  +  +W S+   WK IA     +   +++ VG G
Subjt:  GSHLVNWDHVTNPKSLGRLGIDNIRVKNMALLTKWLWRFGREPKAMWRKIIKS---SHREGFIRDHLSYKKWKSYSSSWKDIASLAGFYKSNSKYKVGRG

Query:  EKVMFWEDTWVSERPLKESFPRMYRL--------------------------SMAKGARVTLKS------------------------------------
        E++ FWED W  ++ LK+ +PR++R+                          S+      T+KS                                    
Subjt:  EKVMFWEDTWVSERPLKESFPRMYRL--------------------------SMAKGARVTLKS------------------------------------

Query:  ----INTMEKVQTRFPGLQISPSICVMCLKSEETASHLSLHCEFADKVWNRFAEAFGQEGCKPKCMVNWLSEVLTGGWLKDKARVLWRNFSRAIVWHLWK
            +NT + +Q R P   ISP IC +C++  E+A HL LHC     +W+R  +    +   PK + + +     G     +  +LW+N S A++W +W+
Subjt:  ----INTMEKVQTRFPGLQISPSICVMCLKSEETASHLSLHCEFADKVWNRFAEAFGQEGCKPKCMVNWLSEVLTGGWLKDKARVLWRNFSRAIVWHLWK

Query:  ERNARVFADK
        ERN R+F DK
Subjt:  ERNARVFADK

A0A438GDE7 LINE-1 retrotransposable element ORF2 protein1.3e-4426.77Show/hide
Query:  MALMMGCKAKNLPFNYLGVTVRGRPNKESFWDAVQETIRSKLALWK----------------------------------GKKIEKSFRRFLWKGADDSK
        +A M+ CKA   P  YLG+ + G P    FWD V E I  +L  W+                                    KIE+  R FLW G  + K
Subjt:  MALMMGCKAKNLPFNYLGVTVRGRPNKESFWDAVQETIRSKLALWK----------------------------------GKKIEKSFRRFLWKGADDSK

Query:  GSHLVNWDHVTNPKSLGRLGIDNIRVKNMALLTKWLWRFGREPKAMWRKIIKS---SHREGFIRDHLSYKKWKSYSSSWKDIASLAGFYKSNSKYKVGRG
          HLVNWD V  PKS G LG   I ++N+ALL KWLWR+ RE  A+W ++I S   SH  G+  D  +  +W S+   WK IA +   +   +++ VG G
Subjt:  GSHLVNWDHVTNPKSLGRLGIDNIRVKNMALLTKWLWRFGREPKAMWRKIIKS---SHREGFIRDHLSYKKWKSYSSSWKDIASLAGFYKSNSKYKVGRG

Query:  EKVMFWEDTWVSERPLKESFPRMYRLSMAKGARVTL----------------------------------------------------------------
        +++ FW+D W  E+PL   +PR+ R+   K A ++                                                                 
Subjt:  EKVMFWEDTWVSERPLKESFPRMYRLSMAKGARVTL----------------------------------------------------------------

Query:  ----------------------------------KSINTMEKVQTRFPGLQISPSICVMCLKSEETASHLSLHCEFADKVWNRFAEAFGQEGCKPKCMVN
                                          K +NT + +Q R P   +SP IC +C+K  ET  HL LHC     +W+R  ++   +   P+ + +
Subjt:  ----------------------------------KSINTMEKVQTRFPGLQISPSICVMCLKSEETASHLSLHCEFADKVWNRFAEAFGQEGCKPKCMVN

Query:  WLSEVLTGGWLKDKARVLWRNFSRAIVWHLWKERNARVFADKFLSFDIFCDVV--QLSAWSVQDRIF
         L+    G     +  VLW+N   A++W +W+ERNAR+F DK  + +   D +    S W+   ++F
Subjt:  WLSEVLTGGWLKDKARVLWRNFSRAIVWHLWKERNARVFADKFLSFDIFCDVV--QLSAWSVQDRIF

A0A438H8I3 Putative ribonuclease H protein1.3e-4426.77Show/hide
Query:  MALMMGCKAKNLPFNYLGVTVRGRPNKESFWDAVQETIRSKLALWK----------------------------------GKKIEKSFRRFLWKGADDSK
        +A M+ CKA   P  YLG+ + G P    FWD V E I  +L  W+                                    KIE+  R FLW G  + K
Subjt:  MALMMGCKAKNLPFNYLGVTVRGRPNKESFWDAVQETIRSKLALWK----------------------------------GKKIEKSFRRFLWKGADDSK

Query:  GSHLVNWDHVTNPKSLGRLGIDNIRVKNMALLTKWLWRFGREPKAMWRKIIKS---SHREGFIRDHLSYKKWKSYSSSWKDIASLAGFYKSNSKYKVGRG
          HLVNWD V  PKS G LG   I ++N+ALL KWLWR+ RE  A+W ++I S   SH  G+  D  +  +W S+   WK IA +   +   +++ VG G
Subjt:  GSHLVNWDHVTNPKSLGRLGIDNIRVKNMALLTKWLWRFGREPKAMWRKIIKS---SHREGFIRDHLSYKKWKSYSSSWKDIASLAGFYKSNSKYKVGRG

Query:  EKVMFWEDTWVSERPLKESFPRMYRLSMAKGARVTL----------------------------------------------------------------
        +++ FW+D W  E+PL   +PR+ R+   K A ++                                                                 
Subjt:  EKVMFWEDTWVSERPLKESFPRMYRLSMAKGARVTL----------------------------------------------------------------

Query:  ----------------------------------KSINTMEKVQTRFPGLQISPSICVMCLKSEETASHLSLHCEFADKVWNRFAEAFGQEGCKPKCMVN
                                          K +NT + +Q R P   +SP IC +C+K  ET  HL LHC     +W+R  ++   +   P+ + +
Subjt:  ----------------------------------KSINTMEKVQTRFPGLQISPSICVMCLKSEETASHLSLHCEFADKVWNRFAEAFGQEGCKPKCMVN

Query:  WLSEVLTGGWLKDKARVLWRNFSRAIVWHLWKERNARVFADKFLSFDIFCDVV--QLSAWSVQDRIF
         L+    G     +  VLW+N   A++W +W+ERNAR+F DK  + +   D +    S W+   ++F
Subjt:  WLSEVLTGGWLKDKARVLWRNFSRAIVWHLWKERNARVFADKFLSFDIFCDVV--QLSAWSVQDRIF

A5BCI7 Reverse transcriptase domain-containing protein3.5e-4527.19Show/hide
Query:  MALMMGCKAKNLPFNYLGVTVRGRPNKESFWDAVQETIRSKLALWK----------------------------------GKKIEKSFRRFLWKGADDSK
        +A M+ CKA   P  YLG+ + G P    FWD V E I  +L  W+                                    KIE+  R FLW G  + K
Subjt:  MALMMGCKAKNLPFNYLGVTVRGRPNKESFWDAVQETIRSKLALWK----------------------------------GKKIEKSFRRFLWKGADDSK

Query:  GSHLVNWDHVTNPKSLGRLGIDNIRVKNMALLTKWLWRFGREPKAMWRKIIKS---SHREGFIRDHLSYKKWKSYSSSWKDIASLAGFYKSNSKYKVGRG
          HLVNWD V  PKS G LG   I ++N+ALL KWLWR+ RE  A+W ++I S   SH  G+  D  +  +W S+   WK IA +   +   +++ VG G
Subjt:  GSHLVNWDHVTNPKSLGRLGIDNIRVKNMALLTKWLWRFGREPKAMWRKIIKS---SHREGFIRDHLSYKKWKSYSSSWKDIASLAGFYKSNSKYKVGRG

Query:  EKVMFWEDTWVSERPLKESFPRMYRLSMAKGARVTL----------------------------------------------------------------
        +++ FW+D W  E+PL   +PR+ R+   K A ++                                                                 
Subjt:  EKVMFWEDTWVSERPLKESFPRMYRLSMAKGARVTL----------------------------------------------------------------

Query:  ----------------------------------KSINTMEKVQTRFPGLQISPSICVMCLKSEETASHLSLHCEFADKVWNRFAEAFGQEGCKPKCMVN
                                          K +NT + +Q R P   +SP IC +C+K  ET  HL LHC     +W+R  ++   +   P+ + +
Subjt:  ----------------------------------KSINTMEKVQTRFPGLQISPSICVMCLKSEETASHLSLHCEFADKVWNRFAEAFGQEGCKPKCMVN

Query:  WLSEVLTGGWLKDKARVLWRNFSRAIVWHLWKERNARVFADKFLSFDIFCDVV--QLSAWSVQDRIF
         LS    G     +  VLW+N   AI+W +W+ERNAR+F DK  + +   D +    S W+   ++F
Subjt:  WLSEVLTGGWLKDKARVLWRNFSRAIVWHLWKERNARVFADKFLSFDIFCDVV--QLSAWSVQDRIF

A5BI72 Reverse transcriptase domain-containing protein1.3e-4426.77Show/hide
Query:  MALMMGCKAKNLPFNYLGVTVRGRPNKESFWDAVQETIRSKLALWK----------------------------------GKKIEKSFRRFLWKGADDSK
        +A M+ CKA   P  YLG+ + G P    FWD V E I  +L  W+                                    KIE+  R FLW G  + K
Subjt:  MALMMGCKAKNLPFNYLGVTVRGRPNKESFWDAVQETIRSKLALWK----------------------------------GKKIEKSFRRFLWKGADDSK

Query:  GSHLVNWDHVTNPKSLGRLGIDNIRVKNMALLTKWLWRFGREPKAMWRKIIKS---SHREGFIRDHLSYKKWKSYSSSWKDIASLAGFYKSNSKYKVGRG
          HLVNWD V  PKS G LG   I ++N+ALL KWLWR+ RE  A+W ++I S   SH  G+  D  +  +W S+   WK IA +   +   +++ VG G
Subjt:  GSHLVNWDHVTNPKSLGRLGIDNIRVKNMALLTKWLWRFGREPKAMWRKIIKS---SHREGFIRDHLSYKKWKSYSSSWKDIASLAGFYKSNSKYKVGRG

Query:  EKVMFWEDTWVSERPLKESFPRMYRLSMAKGARVTL----------------------------------------------------------------
        +++ FW+D W  E+PL   +PR+ R+   K A ++                                                                 
Subjt:  EKVMFWEDTWVSERPLKESFPRMYRLSMAKGARVTL----------------------------------------------------------------

Query:  ----------------------------------KSINTMEKVQTRFPGLQISPSICVMCLKSEETASHLSLHCEFADKVWNRFAEAFGQEGCKPKCMVN
                                          K +NT + +Q R P   +SP IC +C+K  ET  HL LHC     +W+R  ++   +   P+ + +
Subjt:  ----------------------------------KSINTMEKVQTRFPGLQISPSICVMCLKSEETASHLSLHCEFADKVWNRFAEAFGQEGCKPKCMVN

Query:  WLSEVLTGGWLKDKARVLWRNFSRAIVWHLWKERNARVFADKFLSFDIFCDVV--QLSAWSVQDRIF
         L+    G     +  VLW+N   A++W +W+ERNAR+F DK  + +   D +    S W+   ++F
Subjt:  WLSEVLTGGWLKDKARVLWRNFSRAIVWHLWKERNARVFADKFLSFDIFCDVV--QLSAWSVQDRIF

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657501.2e-1533.58Show/hide
Query:  KIEKSFRRFLWKGADDSKGSHLVNWDHVTNPKSLGRLGIDNIRVKNMALLTKWLWRFGREPKAMWRKIIKSSHREGFIRDHLSYKKWKSYSSSWKDIA-S
        ++++  R FLW    + K  HLV W  V +PK  G LG+   +  N AL++K  WR  +E  ++W  +++  +  G IRD        S+SS+W+ IA  
Subjt:  KIEKSFRRFLWKGADDSKGSHLVNWDHVTNPKSLGRLGIDNIRVKNMALLTKWLWRFGREPKAMWRKIIKSSHREGFIRDHLSYKKWKSYSSSWKDIA-S

Query:  LAGFYKSNSKYKVGRGEKVMFWEDTWVSERPLKE
        L         +  G G+++ FW D WVS +PL E
Subjt:  LAGFYKSNSKYKVGRGEKVMFWEDTWVSERPLKE

Arabidopsis top hitse value%identityAlignment
AT1G10000.1 Ribonuclease H-like superfamily protein2.9e-0428.57Show/hide
Query:  CVMCLKSEETASHLSLHCEFADKVWNRFAEAFGQ--EGCKPKCMVNWLSE--VLTGGWLKDKARVLWRNFSRAIVWHLWKERNARVFADKFLSFDIFCDV
        C  C  + ET++H+  HC+FA +VWN      G    G      +N L +  VL    +       W      I WH+WK RN  +F +   S      V
Subjt:  CVMCLKSEETASHLSLHCEFADKVWNRFAEAFGQ--EGCKPKCMVNWLSE--VLTGGWLKDKARVLWRNFSRAIVWHLWKERNARVFADKFLSFDIFCDV

Query:  VQLSAWSVQDRI
        ++    +VQD +
Subjt:  VQLSAWSVQDRI

AT3G25270.1 Ribonuclease H-like superfamily protein2.0e-0532.22Show/hide
Query:  CVMCLKSEETASHLSLHCEFADKVWNRFAEAFGQEGCKPKCMVNWLSEVLTGGWLKDKARVLWRNFSRAIVWHLWKERNARVFADKFLSF
        C  C + +ET+ HL   C +A +VW R +    QE       +    E+L    L ++   L+ N +  I+W LWK RN  VF  K +S+
Subjt:  CVMCLKSEETASHLSLHCEFADKVWNRFAEAFGQEGCKPKCMVNWLSEVLTGGWLKDKARVLWRNFSRAIVWHLWKERNARVFADKFLSF

AT4G29090.1 Ribonuclease H-like superfamily protein5.9e-1329.14Show/hide
Query:  KKIEKSFRRFLWKGADDSKGSHLVNWDHVTNPKSLGRLGIDNIRVKNMALLTKWLWRFGREPKAMWRKIIKSSHREGFIRDHLSYKKWKSYSSSWKDIAS
        K+I      F W+   ++KG H   WDH++  K+ G +G  +I   N+ALL K +WR    P+++  K+ KS  R     D L+       S  WK I +
Subjt:  KKIEKSFRRFLWKGADDSKGSHLVNWDHVTNPKSLGRLGIDNIRVKNMALLTKWLWRFGREPKAMWRKIIKSSHREGFIRDHLSYKKWKSYSSSWKDIAS

Query:  LAGFYKSNSKYKVGRGEKVMFWEDTWVSERPLKESFPRMYRLSMAKGARVT
             +  ++  VG GE ++ W   W+  +P   +  RM R+   + A V+
Subjt:  LAGFYKSNSKYKVGRGEKVMFWEDTWVSERPLKESFPRMYRLSMAKGARVT

AT5G18880.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.1e-0631.4Show/hide
Query:  PSICVMCLKSEETASHLSLHCEFADKVWNRFAEAFGQEGCKPKCMVNWLSEVLTGGWLKDKARVLWRNFSRAIVWHLWKERNARVF
        PS  V+C   +ET +HL   C F+  +W  FA  F      P   +   S  +    L+  +  + +   ++ V+H+WKERNAR+F
Subjt:  PSICVMCLKSEETASHLSLHCEFADKVWNRFAEAFGQEGCKPKCMVNWLSEVLTGGWLKDKARVLWRNFSRAIVWHLWKERNARVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTTGATGATGGGTTGCAAAGCTAAGAATCTTCCTTTCAACTACTTGGGAGTCACTGTCAGAGGTAGGCCAAACAAGGAGTCTTTTTGGGATGCGGTGCAAGAAAC
CATCCGTAGTAAGCTGGCTTTATGGAAAGGTAAAAAGATAGAGAAGTCCTTTAGAAGATTTTTGTGGAAAGGAGCTGATGATTCGAAGGGATCACATTTGGTGAACTGGG
ATCACGTGACTAATCCTAAATCGCTAGGGAGGCTAGGAATTGATAACATAAGAGTGAAAAATATGGCCCTTCTAACAAAATGGCTGTGGAGATTTGGAAGGGAGCCTAAA
GCTATGTGGAGGAAGATCATTAAAAGTAGTCACAGGGAAGGCTTTATTCGTGATCATCTTAGCTACAAAAAATGGAAGTCCTATTCTAGCTCGTGGAAGGACATTGCAAG
CTTGGCTGGCTTCTACAAGAGCAACAGTAAGTATAAGGTCGGTAGGGGGGAGAAGGTGATGTTTTGGGAGGATACTTGGGTCTCTGAGAGGCCTCTAAAAGAGTCGTTTC
CTCGTATGTACAGACTGTCGATGGCTAAGGGGGCGAGAGTCACTCTCAAAAGTATTAACACGATGGAAAAGGTGCAAACAAGATTTCCTGGCCTTCAAATTTCCCCGAGC
ATCTGTGTTATGTGCCTTAAAAGTGAGGAAACGGCCTCACATCTTTCGCTACACTGTGAGTTTGCTGATAAGGTTTGGAATCGGTTTGCTGAAGCTTTTGGGCAGGAGGG
CTGTAAGCCTAAATGTATGGTTAATTGGCTGAGTGAGGTGCTGACAGGAGGATGGTTAAAGGATAAAGCCAGAGTCCTTTGGAGAAATTTCTCTAGAGCTATTGTTTGGC
ACTTGTGGAAGGAAAGAAACGCGAGGGTGTTCGCAGATAAGTTCTTGTCTTTTGATATTTTTTGTGATGTTGTACAGCTTTCGGCCTGGAGTGTCCAAGATAGGATTTTT
TTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTTGATGATGGGTTGCAAAGCTAAGAATCTTCCTTTCAACTACTTGGGAGTCACTGTCAGAGGTAGGCCAAACAAGGAGTCTTTTTGGGATGCGGTGCAAGAAAC
CATCCGTAGTAAGCTGGCTTTATGGAAAGGTAAAAAGATAGAGAAGTCCTTTAGAAGATTTTTGTGGAAAGGAGCTGATGATTCGAAGGGATCACATTTGGTGAACTGGG
ATCACGTGACTAATCCTAAATCGCTAGGGAGGCTAGGAATTGATAACATAAGAGTGAAAAATATGGCCCTTCTAACAAAATGGCTGTGGAGATTTGGAAGGGAGCCTAAA
GCTATGTGGAGGAAGATCATTAAAAGTAGTCACAGGGAAGGCTTTATTCGTGATCATCTTAGCTACAAAAAATGGAAGTCCTATTCTAGCTCGTGGAAGGACATTGCAAG
CTTGGCTGGCTTCTACAAGAGCAACAGTAAGTATAAGGTCGGTAGGGGGGAGAAGGTGATGTTTTGGGAGGATACTTGGGTCTCTGAGAGGCCTCTAAAAGAGTCGTTTC
CTCGTATGTACAGACTGTCGATGGCTAAGGGGGCGAGAGTCACTCTCAAAAGTATTAACACGATGGAAAAGGTGCAAACAAGATTTCCTGGCCTTCAAATTTCCCCGAGC
ATCTGTGTTATGTGCCTTAAAAGTGAGGAAACGGCCTCACATCTTTCGCTACACTGTGAGTTTGCTGATAAGGTTTGGAATCGGTTTGCTGAAGCTTTTGGGCAGGAGGG
CTGTAAGCCTAAATGTATGGTTAATTGGCTGAGTGAGGTGCTGACAGGAGGATGGTTAAAGGATAAAGCCAGAGTCCTTTGGAGAAATTTCTCTAGAGCTATTGTTTGGC
ACTTGTGGAAGGAAAGAAACGCGAGGGTGTTCGCAGATAAGTTCTTGTCTTTTGATATTTTTTGTGATGTTGTACAGCTTTCGGCCTGGAGTGTCCAAGATAGGATTTTT
TTGTAA
Protein sequenceShow/hide protein sequence
MALMMGCKAKNLPFNYLGVTVRGRPNKESFWDAVQETIRSKLALWKGKKIEKSFRRFLWKGADDSKGSHLVNWDHVTNPKSLGRLGIDNIRVKNMALLTKWLWRFGREPK
AMWRKIIKSSHREGFIRDHLSYKKWKSYSSSWKDIASLAGFYKSNSKYKVGRGEKVMFWEDTWVSERPLKESFPRMYRLSMAKGARVTLKSINTMEKVQTRFPGLQISPS
ICVMCLKSEETASHLSLHCEFADKVWNRFAEAFGQEGCKPKCMVNWLSEVLTGGWLKDKARVLWRNFSRAIVWHLWKERNARVFADKFLSFDIFCDVVQLSAWSVQDRIF
L