; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg020307 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020307
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPMD domain-containing protein
Genome locationscaffold1:22892019..22892696
RNA-Seq ExpressionSpg020307
SyntenySpg020307
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025968.1 hypothetical protein E6C27_scaffold34G002830 [Cucumis melo var. makuwa]4.6e-1233.51Show/hide
Query:  EISDYCANNVISNYRKQASLAMWESIHQKIIRTSFDKIPRLEQK------TVKIFHA----------SAYFKKVKKYNQLQSSFSSQLTSESKNRQLEE-
        E S +   NV+SN+ ++ +L MWE I  KI+RT F+ IPRL  +       ++  HA          ++Y K+V  +N +QSS+S+QL S  K RQL+E 
Subjt:  EISDYCANNVISNYRKQASLAMWESIHQKIIRTSFDKIPRLEQK------TVKIFHA----------SAYFKKVKKYNQLQSSFSSQLTSESKNRQLEE-

Query:  ------TKFSLEK--------ILYGESELLTAKGILQQQHLQALQEEEELEVRL-EAVKAKRDAPVLTDADAKTPTILRGMLEDAQEELKNYKW
              T+ SLEK         +  ESE L+   IL  + ++A+ ++E    +L + V      P +T+   +    +R  +E AQEE KN+KW
Subjt:  ------TKFSLEK--------ILYGESELLTAKGILQQQHLQALQEEEELEVRL-EAVKAKRDAPVLTDADAKTPTILRGMLEDAQEELKNYKW

KAA0057576.1 hypothetical protein E6C27_scaffold497G00480 [Cucumis melo var. makuwa]3.9e-1127.14Show/hide
Query:  EISDYCANNVISNYRKQASLAMWESIHQKIIRTSFDKIPRLEQKTVKIF----------------HASAYFKKVKKYNQLQSSFSSQLTSESKNRQLEET
        E S +    V+SN+ ++ +L MWE I  KI+RT F+ IPRL      +F                + ++Y K+V  +N +QSS+S+QL+S  K RQL E 
Subjt:  EISDYCANNVISNYRKQASLAMWESIHQKIIRTSFDKIPRLEQKTVKIF----------------HASAYFKKVKKYNQLQSSFSSQLTSESKNRQLEET

Query:  KFSLEKILYGESELLTAKGILQQQHLQALQEEEELEVRLEAVKAKRD--------------------------------APVLTDADAKTPTILRGMLED
          ++++ L    +L     ++Q++ ++   E +ELE RL+++ A+ +                                 P +T+   +    +R  +E 
Subjt:  KFSLEKILYGESELLTAKGILQQQHLQALQEEEELEVRLEAVKAKRD--------------------------------APVLTDADAKTPTILRGMLED

Query:  AQEELKNYKW
        A+EE KN+KW
Subjt:  AQEELKNYKW

KAA0060431.1 hypothetical protein E6C27_scaffold22G002540 [Cucumis melo var. makuwa]1.4e-1127.62Show/hide
Query:  EISDYCANNVISNYRKQASLAMWESIHQKIIRTSFDKIPRLEQKTVKIF----------------HASAYFKKVKKYNQLQSSFSSQLTSESKNRQLEET
        E S +    V+ N+ K+ +L MWE I  KI+RT F+ IPRL  +   +                 + ++Y K+V  +N +QSS+S+QL S  K RQL+E 
Subjt:  EISDYCANNVISNYRKQASLAMWESIHQKIIRTSFDKIPRLEQKTVKIF----------------HASAYFKKVKKYNQLQSSFSSQLTSESKNRQLEET

Query:  KFSLEKILYGESELLTAKGILQQQHLQALQEEEELEVRLEAVKAKRD--------------------------------APVLTDADAKTPTILRGMLED
          ++E+ L    +L     ++Q++ +Q   E++ELE RL+++ A+ +                                 P +T+   +   ++R  +E 
Subjt:  KFSLEKILYGESELLTAKGILQQQHLQALQEEEELEVRLEAVKAKRD--------------------------------APVLTDADAKTPTILRGMLED

Query:  AQEELKNYKW
        A+EE KN+KW
Subjt:  AQEELKNYKW

KAA0065375.1 hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa]1.8e-1127.1Show/hide
Query:  AAASEISDYCANNVISNYRKQASLAMWESIHQKIIRTSFDKIPRLEQKTVKIF----------------HASAYFKKVKKYNQLQSSFSSQLTSESKNRQ
        A + E S +   NV+SN+ ++ +L MWE I  KI+RT F+ IPRL  +   +                 + ++Y K+V  +N +QSS+S+QL S  K RQ
Subjt:  AAASEISDYCANNVISNYRKQASLAMWESIHQKIIRTSFDKIPRLEQKTVKIF----------------HASAYFKKVKKYNQLQSSFSSQLTSESKNRQ

Query:  LEETKFSLEKILYGESELLTAKGILQQQHLQALQEEEELEVRLEAVKAKRD--------------------------------APVLTDADAKTPTILRG
        L E   +++++L    +L     ++Q++  +   E +ELE RL ++ A+ +                                 P +T+   +    +R 
Subjt:  LEETKFSLEKILYGESELLTAKGILQQQHLQALQEEEELEVRLEAVKAKRD--------------------------------APVLTDADAKTPTILRG

Query:  MLEDAQEELKNYKW
         +E A+EE KN+KW
Subjt:  MLEDAQEELKNYKW

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]3.1e-1631.9Show/hide
Query:  VTQSCHPVTDEISGKIKTTTHAAASEISDYCANNVISNYRKQASLAMWESIHQKIIRTSFDKIPRLEQKTVKIFHASA----------------YFKKVK
        +  +C PV      K++ T     SEIS +CA+++IS+ R+QA++ +WE++ QKIIRT F+++  LE +  KIF A A                YF+ V+
Subjt:  VTQSCHPVTDEISGKIKTTTHAAASEISDYCANNVISNYRKQASLAMWESIHQKIIRTSFDKIPRLEQKTVKIFHASA----------------YFKKVK

Query:  KYNQLQSSFSSQLTSE---------------SKNRQLEETKFSLEKI--LYGESELLTAK------------GILQQQHLQALQEEEELEVRLEAVKAKR
         +NQ+ SSF  Q T +                +NR L ET  +  ++  L  +   L AK            GI+ +  L+  Q++ E+    E +    
Subjt:  KYNQLQSSFSSQLTSE---------------SKNRQLEETKFSLEKI--LYGESELLTAK------------GILQQQHLQALQEEEELEVRLEAVKAKR

Query:  DAPVLTDADAKTPTILRGMLEDAQEELKNYKW
         AP++ D DAK  + LR  LE   EELKN+KW
Subjt:  DAPVLTDADAKTPTILRGMLEDAQEELKNYKW

TrEMBL top hitse value%identityAlignment
A0A5A7SIG6 PMD domain-containing protein2.2e-1233.51Show/hide
Query:  EISDYCANNVISNYRKQASLAMWESIHQKIIRTSFDKIPRLEQK------TVKIFHA----------SAYFKKVKKYNQLQSSFSSQLTSESKNRQLEE-
        E S +   NV+SN+ ++ +L MWE I  KI+RT F+ IPRL  +       ++  HA          ++Y K+V  +N +QSS+S+QL S  K RQL+E 
Subjt:  EISDYCANNVISNYRKQASLAMWESIHQKIIRTSFDKIPRLEQK------TVKIFHA----------SAYFKKVKKYNQLQSSFSSQLTSESKNRQLEE-

Query:  ------TKFSLEK--------ILYGESELLTAKGILQQQHLQALQEEEELEVRL-EAVKAKRDAPVLTDADAKTPTILRGMLEDAQEELKNYKW
              T+ SLEK         +  ESE L+   IL  + ++A+ ++E    +L + V      P +T+   +    +R  +E AQEE KN+KW
Subjt:  ------TKFSLEK--------ILYGESELLTAKGILQQQHLQALQEEEELEVRL-EAVKAKRDAPVLTDADAKTPTILRGMLEDAQEELKNYKW

A0A5A7U8L3 PMD domain-containing protein1.9e-1129.67Show/hide
Query:  AAASEISDYCANNVISNYRKQASLAMWESIHQKIIRTSFDKIPRLEQKTVKIF----------------HASAYFKKVKKYNQLQSSFSSQLTSESKNRQ
        A + E S +    V+SN+ ++ +L MWE I  KI+RT F+ IPRL  +   +F                + ++Y K+V  +N +QSS+S+QL S  K  Q
Subjt:  AAASEISDYCANNVISNYRKQASLAMWESIHQKIIRTSFDKIPRLEQKTVKIF----------------HASAYFKKVKKYNQLQSSFSSQLTSESKNRQ

Query:  LEETKFSLEKILYGESELLTAKGILQQQHLQALQEEEELEVRLEAVKAKRDAPVLTDADAKTPTILRGMLEDAQEELKNYKW
        L E   ++ + L    +L      + QQ L+  + ++E       V      P +T+   +    +R  +E A+EE KN+KW
Subjt:  LEETKFSLEKILYGESELLTAKGILQQQHLQALQEEEELEVRLEAVKAKRDAPVLTDADAKTPTILRGMLEDAQEELKNYKW

A0A5A7UTW5 Uncharacterized protein1.9e-1127.14Show/hide
Query:  EISDYCANNVISNYRKQASLAMWESIHQKIIRTSFDKIPRLEQKTVKIF----------------HASAYFKKVKKYNQLQSSFSSQLTSESKNRQLEET
        E S +    V+SN+ ++ +L MWE I  KI+RT F+ IPRL      +F                + ++Y K+V  +N +QSS+S+QL+S  K RQL E 
Subjt:  EISDYCANNVISNYRKQASLAMWESIHQKIIRTSFDKIPRLEQKTVKIF----------------HASAYFKKVKKYNQLQSSFSSQLTSESKNRQLEET

Query:  KFSLEKILYGESELLTAKGILQQQHLQALQEEEELEVRLEAVKAKRD--------------------------------APVLTDADAKTPTILRGMLED
          ++++ L    +L     ++Q++ ++   E +ELE RL+++ A+ +                                 P +T+   +    +R  +E 
Subjt:  KFSLEKILYGESELLTAKGILQQQHLQALQEEEELEVRLEAVKAKRD--------------------------------APVLTDADAKTPTILRGMLED

Query:  AQEELKNYKW
        A+EE KN+KW
Subjt:  AQEELKNYKW

A0A5A7V3X5 PMD domain-containing protein6.5e-1227.62Show/hide
Query:  EISDYCANNVISNYRKQASLAMWESIHQKIIRTSFDKIPRLEQKTVKIF----------------HASAYFKKVKKYNQLQSSFSSQLTSESKNRQLEET
        E S +    V+ N+ K+ +L MWE I  KI+RT F+ IPRL  +   +                 + ++Y K+V  +N +QSS+S+QL S  K RQL+E 
Subjt:  EISDYCANNVISNYRKQASLAMWESIHQKIIRTSFDKIPRLEQKTVKIF----------------HASAYFKKVKKYNQLQSSFSSQLTSESKNRQLEET

Query:  KFSLEKILYGESELLTAKGILQQQHLQALQEEEELEVRLEAVKAKRD--------------------------------APVLTDADAKTPTILRGMLED
          ++E+ L    +L     ++Q++ +Q   E++ELE RL+++ A+ +                                 P +T+   +   ++R  +E 
Subjt:  KFSLEKILYGESELLTAKGILQQQHLQALQEEEELEVRLEAVKAKRD--------------------------------APVLTDADAKTPTILRGMLED

Query:  AQEELKNYKW
        A+EE KN+KW
Subjt:  AQEELKNYKW

A0A5A7VHW8 PMD domain-containing protein8.5e-1227.1Show/hide
Query:  AAASEISDYCANNVISNYRKQASLAMWESIHQKIIRTSFDKIPRLEQKTVKIF----------------HASAYFKKVKKYNQLQSSFSSQLTSESKNRQ
        A + E S +   NV+SN+ ++ +L MWE I  KI+RT F+ IPRL  +   +                 + ++Y K+V  +N +QSS+S+QL S  K RQ
Subjt:  AAASEISDYCANNVISNYRKQASLAMWESIHQKIIRTSFDKIPRLEQKTVKIF----------------HASAYFKKVKKYNQLQSSFSSQLTSESKNRQ

Query:  LEETKFSLEKILYGESELLTAKGILQQQHLQALQEEEELEVRLEAVKAKRD--------------------------------APVLTDADAKTPTILRG
        L E   +++++L    +L     ++Q++  +   E +ELE RL ++ A+ +                                 P +T+   +    +R 
Subjt:  LEETKFSLEKILYGESELLTAKGILQQQHLQALQEEEELEVRLEAVKAKRD--------------------------------APVLTDADAKTPTILRG

Query:  MLEDAQEELKNYKW
         +E A+EE KN+KW
Subjt:  MLEDAQEELKNYKW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGAGTTGTGACTCAATCTTGTCATCCTGTAACTGATGAAATTTCTGGAAAAATAAAGACAACAACCCACGCAGCTGCGTCTGAGATCTCTGATTATTGTGCTAA
CAATGTCATTTCCAACTATAGGAAACAGGCTTCCCTTGCCATGTGGGAGAGCATACACCAGAAGATCATACGCACTTCCTTCGACAAGATACCTCGTCTTGAACAAAAGA
CGGTCAAAATATTTCATGCAAGTGCGTATTTCAAGAAGGTAAAGAAGTATAACCAGCTGCAGTCGTCATTTTCTTCTCAATTAACTTCGGAGAGTAAGAATCGCCAATTG
GAAGAGACTAAGTTTAGCTTGGAGAAGATACTATATGGTGAAAGTGAATTACTCACAGCGAAGGGTATACTTCAGCAACAACATTTGCAAGCATTGCAAGAAGAAGAAGA
ATTGGAAGTTAGGCTTGAAGCTGTGAAGGCTAAGCGAGATGCCCCTGTTCTTACTGATGCTGATGCTAAAACTCCAACGATACTTCGTGGAATGTTGGAAGATGCACAAG
AAGAGCTGAAGAACTACAAGTGGATGTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATAGAGTTGTGACTCAATCTTGTCATCCTGTAACTGATGAAATTTCTGGAAAAATAAAGACAACAACCCACGCAGCTGCGTCTGAGATCTCTGATTATTGTGCTAA
CAATGTCATTTCCAACTATAGGAAACAGGCTTCCCTTGCCATGTGGGAGAGCATACACCAGAAGATCATACGCACTTCCTTCGACAAGATACCTCGTCTTGAACAAAAGA
CGGTCAAAATATTTCATGCAAGTGCGTATTTCAAGAAGGTAAAGAAGTATAACCAGCTGCAGTCGTCATTTTCTTCTCAATTAACTTCGGAGAGTAAGAATCGCCAATTG
GAAGAGACTAAGTTTAGCTTGGAGAAGATACTATATGGTGAAAGTGAATTACTCACAGCGAAGGGTATACTTCAGCAACAACATTTGCAAGCATTGCAAGAAGAAGAAGA
ATTGGAAGTTAGGCTTGAAGCTGTGAAGGCTAAGCGAGATGCCCCTGTTCTTACTGATGCTGATGCTAAAACTCCAACGATACTTCGTGGAATGTTGGAAGATGCACAAG
AAGAGCTGAAGAACTACAAGTGGATGTCGTGA
Protein sequenceShow/hide protein sequence
MDRVVTQSCHPVTDEISGKIKTTTHAAASEISDYCANNVISNYRKQASLAMWESIHQKIIRTSFDKIPRLEQKTVKIFHASAYFKKVKKYNQLQSSFSSQLTSESKNRQL
EETKFSLEKILYGESELLTAKGILQQQHLQALQEEEELEVRLEAVKAKRDAPVLTDADAKTPTILRGMLEDAQEELKNYKWMS