; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg020313 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020313
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPMD domain-containing protein
Genome locationscaffold1:29084020..29085512
RNA-Seq ExpressionSpg020313
SyntenySpg020313
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025356.1 hypothetical protein E6C27_scaffold1204G00400 [Cucumis melo var. makuwa]3.0e-1023.08Show/hide
Query:  DPRDQTTRSYDKWWSQKHGHYLEEGIQLLVNSFTIPSTKPKPHKDLDTKKAGK--RVIEALTRPMNNLRDE-----EESHSSNDDRHWKRPKK-------
        +P    T+ +  WW+ KHG Y E+    LV+S   P ++ +  K+      GK  R++EA+     NL +E     +ES SS  DRHWKRP K       
Subjt:  DPRDQTTRSYDKWWSQKHGHYLEEGIQLLVNSFTIPSTKPKPHKDLDTKKAGK--RVIEALTRPMNNLRDE-----EESHSSNDDRHWKRPKK-------

Query:  --------------VPL---------------EDQSLTSPNAF------ASTSKN---------------------------------------------
                      VPL                D+SLT P+A         TSK                                              
Subjt:  --------------VPL---------------EDQSLTSPNAF------ASTSKN---------------------------------------------

Query:  ---------------IGSVSKR--------------------KEAALSMWKSIHGKIVCTFFEHVGDLEQEMLKIFDAMAEIRDSQLEEKKLHLEKALSI
                       +G+ +K+                    ++ AL MW+ I  KI+ T FE++  L  E+  +   ++  +  QL EK   +++AL++
Subjt:  ---------------IGSVSKR--------------------KEAALSMWKSIHGKIVCTFFEHVGDLEQEMLKIFDAMAEIRDSQLEEKKLHLEKALSI

Query:  ESRVAEEKDVLQKKLVCSVSEVAELKVKVAKLEAKLKTTETKSEKLSNSLSEKEKDLDRERLVVSQIREEIGSVECAPTISALDVQTLSTLHGLLEGTRD
          ++  +  V+Q++        AEL ++  +LE +L++  T+SE+LS    EK + +D++ L V+++++E+ ++E  P I+   ++ L+++   +E  R+
Subjt:  ESRVAEEKDVLQKKLVCSVSEVAELKVKVAKLEAKLKTTETKSEKLSNSLSEKEKDLDRERLVVSQIREEIGSVECAPTISALDVQTLSTLHGLLEGTRD

Query:  ELK
        E K
Subjt:  ELK

KAA0025724.1 uncharacterized protein E6C27_scaffold653G00030 [Cucumis melo var. makuwa]4.9e-1329.19Show/hide
Query:  EESHSSNDDRHWKRPK----------KVPLE-------DQSLTSPN---AFASTSKNIGSVSK-------------------------------------
        E+SHS+NDDRHWKRPK          K P+E        + + SP    A  ++   IG+ +                                      
Subjt:  EESHSSNDDRHWKRPK----------KVPLE-------DQSLTSPN---AFASTSKNIGSVSK-------------------------------------

Query:  RKEAALSMWKSIHGKIVCTFFEHVGDLEQEMLKIFDAMA----------------------------------EIRDSQLEEKKLHLEKALSIESRVAEE
        R++ A+++ +S+  KI+CT FE V  L+ EM KIF A+A                                    +D+QL E K  ++     E+R+ +E
Subjt:  RKEAALSMWKSIHGKIVCTFFEHVGDLEQEMLKIFDAMA----------------------------------EIRDSQLEEKKLHLEKALSIESRVAEE

Query:  KDVLQKKLVCSVSEVAELKVKVAKLEAKLKTTETKSEKLSNSLSEKEKDLDRERLVVSQIREEIGSVECAPTISALDVQTLSTLHGLLEGTRDELKEL
           +Q++L       A L  K AKLEAKLK   T+S KLS  +S+ E +L +++  +S+  EEI  ++CA  I   D + LS L   LE T +ELK L
Subjt:  KDVLQKKLVCSVSEVAELKVKVAKLEAKLKTTETKSEKLSNSLSEKEKDLDRERLVVSQIREEIGSVECAPTISALDVQTLSTLHGLLEGTRDELKEL

KAA0050733.1 uncharacterized protein E6C27_scaffold560G00370 [Cucumis melo var. makuwa]7.6e-1428.02Show/hide
Query:  PRDQTTRSYDKWWSQKHGHYLEEGIQLLVNSFTIPSTKPKPHKDLDTKKAGKRVIEALTRPM------------NNLRDE--------------EESHSS
        P +  T  Y  WW  KHG YL+EG+Q L++  T    K K  K ++     K        P+            +N+  +              E+SHSS
Subjt:  PRDQTTRSYDKWWSQKHGHYLEEGIQLLVNSFTIPSTKPKPHKDLDTKKAGKRVIEALTRPM------------NNLRDE--------------EESHSS

Query:  NDDRHWKRPK----------KVPLE--DQSLTSPNAFASTSKN---IGS--------VSK-----------------------------RKEAALSMWKS
        NDDRHWKRPK          K P+E  D  + SP   +++  +   IG+        V+K                             R++ A+++W+S
Subjt:  NDDRHWKRPK----------KVPLE--DQSLTSPNAFASTSKN---IGS--------VSK-----------------------------RKEAALSMWKS

Query:  IHGKIVCTFFEHVGDLEQEMLKIFDAMA----------------------------------EIRDSQLEEKKLHLEKALSIESRVAEEKDVLQKKLVCS
        +  KI+ T FE V  LE EM KIF A+A                                    +D+QL E K  ++     ++R+ EE  ++Q++L   
Subjt:  IHGKIVCTFFEHVGDLEQEMLKIFDAMA----------------------------------EIRDSQLEEKKLHLEKALSIESRVAEEKDVLQKKLVCS

Query:  VSEVAELKVKVAKLEAKLKTTETKSEKLSNSLSEKEKDL
            A L  K AKLEAKLKT  T+S KLS  +S+ E +L
Subjt:  VSEVAELKVKVAKLEAKLKTTETKSEKLSNSLSEKEKDL

TYK06155.1 uncharacterized protein E5676_scaffold287G00030 [Cucumis melo var. makuwa]6.0e-1128.52Show/hide
Query:  EESHSSNDDRHWKRPK----------KVPLE-------DQSLTSPN---AFASTSKNIGSVSK-------------------------------------
        E+SHS+NDDRHWKRPK          K P+E        + + SP    A  ++   IG+ +                                      
Subjt:  EESHSSNDDRHWKRPK----------KVPLE-------DQSLTSPN---AFASTSKNIGSVSK-------------------------------------

Query:  RKEAALSMWKSIHGKIVCTFFEHVGDLEQEMLKIFDAMA----------------------------------EIRDSQLEEKKLHLEKALSIESRVAEE
        R++ A+++ +S+  KI+ T FE V  L+ EM KIF A+A                                    +D+QL E K  ++     E+R+ +E
Subjt:  RKEAALSMWKSIHGKIVCTFFEHVGDLEQEMLKIFDAMA----------------------------------EIRDSQLEEKKLHLEKALSIESRVAEE

Query:  KDVLQKKLVCSVSEVAELKVKVAKLEAKLKTTETKSEKLSNSLSEKEKDLDRERLVVSQIREEIGSVECAPTISALDVQTLSTLHGLLEGTRDELKEL
           +Q++L       A L  K AKLEAKLK   T+S KLS  +S+ E +L +++  +S+  EEI  ++CA  I   D + L  L   LE T +ELK L
Subjt:  KDVLQKKLVCSVSEVAELKVKVAKLEAKLKTTETKSEKLSNSLSEKEKDLDRERLVVSQIREEIGSVECAPTISALDVQTLSTLHGLLEGTRDELKEL

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]1.4e-1223.87Show/hide
Query:  DPRDQTTRSYDKWWSQKHGHYLEEGIQLLVNSFTIPSTKPKPHKDLD-----------TKKAGKRVIEALTRPMNNLRDE--------------------
        +P    T  Y  WW  KHG YL+EG+Q L++  T P  K K  K ++           + +  +R++E +      L D                     
Subjt:  DPRDQTTRSYDKWWSQKHGHYLEEGIQLLVNSFTIPSTKPKPHKDLD-----------TKKAGKRVIEALTRPMNNLRDE--------------------

Query:  ---------------EESHSSNDDRHWKRPKK-----------------------VP------------------------------------------L
                       E+S SSNDDRHWKRPKK                       VP                                          +
Subjt:  ---------------EESHSSNDDRHWKRPKK-----------------------VP------------------------------------------L

Query:  EDQSLTSPN--------AFASTSK-----NIGSV---------------------------------SKRKEAALSMWKSIHGKIVCTFFEHVGDLEQEM
        ED   + PN        ++   SK     NI S                                    R++AA+++W+++  KI+ T FE +  LE EM
Subjt:  EDQSLTSPN--------AFASTSK-----NIGSV---------------------------------SKRKEAALSMWKSIHGKIVCTFFEHVGDLEQEM

Query:  LKIFDAMA----------------------------------EIRDSQLEEKKLHLEKALSIESRVAEEKDVLQKKLVCSVSEVAELKVKVAKLEAKLKT
         KIFDA+A                                    +D QL E K  ++     E+R+  E +  +++L         L  K AKLEAKLK 
Subjt:  LKIFDAMA----------------------------------EIRDSQLEEKKLHLEKALSIESRVAEEKDVLQKKLVCSVSEVAELKVKVAKLEAKLKT

Query:  TETKSEKLSNSLSEKEKDLDRERLVVSQIREEIGSVECAPTISALDVQTLSTLHGLLEGTRDELK
           +S KLS  + + + +L +++  +S+  EEI  +ECAP +  +D + LSTL   LE T +ELK
Subjt:  TETKSEKLSNSLSEKEKDLDRERLVVSQIREEIGSVECAPTISALDVQTLSTLHGLLEGTRDELK

TrEMBL top hitse value%identityAlignment
A0A1R3HSY5 Uncharacterized protein2.1e-0932.17Show/hide
Query:  TRPMNNLRDEEESHSSNDDRHWKRPK-----------KVPLEDQSLTSPNAFASTSKNIGSVSKRKEAALSMWKSIHGKIVCTFFEHVGDLEQEMLKIFD
        T  ++NL DE     ++ +RHWKR K           K  L    L++P  F   S +      + + AL +W+SI  KI  T F+ V     E+ KIF 
Subjt:  TRPMNNLRDEEESHSSNDDRHWKRPK-----------KVPLEDQSLTSPNAFASTSKNIGSVSKRKEAALSMWKSIHGKIVCTFFEHVGDLEQEMLKIFD

Query:  AMAEIRD--SQLEEKKLHLEKALSIESRVAEEKDVLQKKLVCSVSEVAELKVKVAKLEAKLKTTETKSEKLSNSLSEKEKDLDRERLVVSQIREEIGSVE
        A+  I+D   +L+     LE+++S ES+ A   D L  +L     E++ L+ K AKLE+ LK              E +K L+  R  VS IREE+   E
Subjt:  AMAEIRD--SQLEEKKLHLEKALSIESRVAEEKDVLQKKLVCSVSEVAELKVKVAKLEAKLKTTETKSEKLSNSLSEKEKDLDRERLVVSQIREEIGSVE

Query:  CAPTISALDVQTLSTLHGLLEGTRDELKEL
          P +S  D + L  L  +L  +R++LK L
Subjt:  CAPTISALDVQTLSTLHGLLEGTRDELKEL

A0A5A7SHN8 PMD domain-containing protein1.4e-1023.08Show/hide
Query:  DPRDQTTRSYDKWWSQKHGHYLEEGIQLLVNSFTIPSTKPKPHKDLDTKKAGK--RVIEALTRPMNNLRDE-----EESHSSNDDRHWKRPKK-------
        +P    T+ +  WW+ KHG Y E+    LV+S   P ++ +  K+      GK  R++EA+     NL +E     +ES SS  DRHWKRP K       
Subjt:  DPRDQTTRSYDKWWSQKHGHYLEEGIQLLVNSFTIPSTKPKPHKDLDTKKAGK--RVIEALTRPMNNLRDE-----EESHSSNDDRHWKRPKK-------

Query:  --------------VPL---------------EDQSLTSPNAF------ASTSKN---------------------------------------------
                      VPL                D+SLT P+A         TSK                                              
Subjt:  --------------VPL---------------EDQSLTSPNAF------ASTSKN---------------------------------------------

Query:  ---------------IGSVSKR--------------------KEAALSMWKSIHGKIVCTFFEHVGDLEQEMLKIFDAMAEIRDSQLEEKKLHLEKALSI
                       +G+ +K+                    ++ AL MW+ I  KI+ T FE++  L  E+  +   ++  +  QL EK   +++AL++
Subjt:  ---------------IGSVSKR--------------------KEAALSMWKSIHGKIVCTFFEHVGDLEQEMLKIFDAMAEIRDSQLEEKKLHLEKALSI

Query:  ESRVAEEKDVLQKKLVCSVSEVAELKVKVAKLEAKLKTTETKSEKLSNSLSEKEKDLDRERLVVSQIREEIGSVECAPTISALDVQTLSTLHGLLEGTRD
          ++  +  V+Q++        AEL ++  +LE +L++  T+SE+LS    EK + +D++ L V+++++E+ ++E  P I+   ++ L+++   +E  R+
Subjt:  ESRVAEEKDVLQKKLVCSVSEVAELKVKVAKLEAKLKTTETKSEKLSNSLSEKEKDLDRERLVVSQIREEIGSVECAPTISALDVQTLSTLHGLLEGTRD

Query:  ELK
        E K
Subjt:  ELK

A0A5A7SJ85 Uncharacterized protein2.4e-1329.19Show/hide
Query:  EESHSSNDDRHWKRPK----------KVPLE-------DQSLTSPN---AFASTSKNIGSVSK-------------------------------------
        E+SHS+NDDRHWKRPK          K P+E        + + SP    A  ++   IG+ +                                      
Subjt:  EESHSSNDDRHWKRPK----------KVPLE-------DQSLTSPN---AFASTSKNIGSVSK-------------------------------------

Query:  RKEAALSMWKSIHGKIVCTFFEHVGDLEQEMLKIFDAMA----------------------------------EIRDSQLEEKKLHLEKALSIESRVAEE
        R++ A+++ +S+  KI+CT FE V  L+ EM KIF A+A                                    +D+QL E K  ++     E+R+ +E
Subjt:  RKEAALSMWKSIHGKIVCTFFEHVGDLEQEMLKIFDAMA----------------------------------EIRDSQLEEKKLHLEKALSIESRVAEE

Query:  KDVLQKKLVCSVSEVAELKVKVAKLEAKLKTTETKSEKLSNSLSEKEKDLDRERLVVSQIREEIGSVECAPTISALDVQTLSTLHGLLEGTRDELKEL
           +Q++L       A L  K AKLEAKLK   T+S KLS  +S+ E +L +++  +S+  EEI  ++CA  I   D + LS L   LE T +ELK L
Subjt:  KDVLQKKLVCSVSEVAELKVKVAKLEAKLKTTETKSEKLSNSLSEKEKDLDRERLVVSQIREEIGSVECAPTISALDVQTLSTLHGLLEGTRDELKEL

A0A5A7U4C3 Uncharacterized protein3.7e-1428.02Show/hide
Query:  PRDQTTRSYDKWWSQKHGHYLEEGIQLLVNSFTIPSTKPKPHKDLDTKKAGKRVIEALTRPM------------NNLRDE--------------EESHSS
        P +  T  Y  WW  KHG YL+EG+Q L++  T    K K  K ++     K        P+            +N+  +              E+SHSS
Subjt:  PRDQTTRSYDKWWSQKHGHYLEEGIQLLVNSFTIPSTKPKPHKDLDTKKAGKRVIEALTRPM------------NNLRDE--------------EESHSS

Query:  NDDRHWKRPK----------KVPLE--DQSLTSPNAFASTSKN---IGS--------VSK-----------------------------RKEAALSMWKS
        NDDRHWKRPK          K P+E  D  + SP   +++  +   IG+        V+K                             R++ A+++W+S
Subjt:  NDDRHWKRPK----------KVPLE--DQSLTSPNAFASTSKN---IGS--------VSK-----------------------------RKEAALSMWKS

Query:  IHGKIVCTFFEHVGDLEQEMLKIFDAMA----------------------------------EIRDSQLEEKKLHLEKALSIESRVAEEKDVLQKKLVCS
        +  KI+ T FE V  LE EM KIF A+A                                    +D+QL E K  ++     ++R+ EE  ++Q++L   
Subjt:  IHGKIVCTFFEHVGDLEQEMLKIFDAMA----------------------------------EIRDSQLEEKKLHLEKALSIESRVAEEKDVLQKKLVCS

Query:  VSEVAELKVKVAKLEAKLKTTETKSEKLSNSLSEKEKDL
            A L  K AKLEAKLKT  T+S KLS  +S+ E +L
Subjt:  VSEVAELKVKVAKLEAKLKTTETKSEKLSNSLSEKEKDL

A0A5D3C453 Uncharacterized protein2.9e-1128.52Show/hide
Query:  EESHSSNDDRHWKRPK----------KVPLE-------DQSLTSPN---AFASTSKNIGSVSK-------------------------------------
        E+SHS+NDDRHWKRPK          K P+E        + + SP    A  ++   IG+ +                                      
Subjt:  EESHSSNDDRHWKRPK----------KVPLE-------DQSLTSPN---AFASTSKNIGSVSK-------------------------------------

Query:  RKEAALSMWKSIHGKIVCTFFEHVGDLEQEMLKIFDAMA----------------------------------EIRDSQLEEKKLHLEKALSIESRVAEE
        R++ A+++ +S+  KI+ T FE V  L+ EM KIF A+A                                    +D+QL E K  ++     E+R+ +E
Subjt:  RKEAALSMWKSIHGKIVCTFFEHVGDLEQEMLKIFDAMA----------------------------------EIRDSQLEEKKLHLEKALSIESRVAEE

Query:  KDVLQKKLVCSVSEVAELKVKVAKLEAKLKTTETKSEKLSNSLSEKEKDLDRERLVVSQIREEIGSVECAPTISALDVQTLSTLHGLLEGTRDELKEL
           +Q++L       A L  K AKLEAKLK   T+S KLS  +S+ E +L +++  +S+  EEI  ++CA  I   D + L  L   LE T +ELK L
Subjt:  KDVLQKKLVCSVSEVAELKVKVAKLEAKLKTTETKSEKLSNSLSEKEKDLDRERLVVSQIREEIGSVECAPTISALDVQTLSTLHGLLEGTRDELKEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGCATGCCAGTCTTCCCTCCAGGAATGATAAAGCTGAAATTTTGGAAGACGTTAAGGATCCTCGTGATCAAACCACTCGTTCTTATGATAAGTGGTGGTCGCAAAA
ACATGGGCACTATTTGGAAGAAGGCATACAACTTTTAGTGAATAGTTTTACTATTCCTTCAACTAAGCCCAAACCTCATAAAGATCTGGATACCAAAAAAGCTGGTAAGA
GGGTGATTGAGGCGTTAACTCGTCCGATGAACAACCTTCGTGATGAAGAAGAAAGCCATAGTAGCAATGACGATCGTCATTGGAAAAGGCCAAAAAAGGTACCTTTGGAG
GATCAATCATTAACGAGTCCCAATGCTTTTGCTTCTACCTCGAAGAATATTGGCTCCGTGTCAAAAAGAAAAGAGGCTGCTTTGTCCATGTGGAAAAGCATTCACGGGAA
GATCGTATGTACCTTTTTTGAGCACGTTGGTGACCTTGAGCAGGAAATGCTGAAAATATTTGATGCAATGGCCGAAATTAGAGATAGCCAATTGGAGGAAAAGAAGCTCC
ACTTAGAAAAGGCCTTATCTATTGAAAGTCGTGTTGCTGAGGAGAAGGATGTACTTCAGAAGAAACTTGTTTGCTCTGTCTCAGAGGTAGCAGAATTAAAGGTCAAGGTA
GCGAAATTAGAGGCCAAATTGAAAACTACAGAGACTAAGTCAGAAAAGCTTTCCAATTCGCTTTCCGAGAAGGAAAAGGACCTAGATCGAGAAAGACTAGTGGTTTCACA
AATACGCGAGGAGATTGGTAGCGTCGAGTGTGCCCCCACTATCAGCGCCTTAGACGTTCAAACTCTATCGACACTCCATGGACTTTTGGAGGGTACCCGCGATGAGCTGA
AGGAACTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGGCATGCCAGTCTTCCCTCCAGGAATGATAAAGCTGAAATTTTGGAAGACGTTAAGGATCCTCGTGATCAAACCACTCGTTCTTATGATAAGTGGTGGTCGCAAAA
ACATGGGCACTATTTGGAAGAAGGCATACAACTTTTAGTGAATAGTTTTACTATTCCTTCAACTAAGCCCAAACCTCATAAAGATCTGGATACCAAAAAAGCTGGTAAGA
GGGTGATTGAGGCGTTAACTCGTCCGATGAACAACCTTCGTGATGAAGAAGAAAGCCATAGTAGCAATGACGATCGTCATTGGAAAAGGCCAAAAAAGGTACCTTTGGAG
GATCAATCATTAACGAGTCCCAATGCTTTTGCTTCTACCTCGAAGAATATTGGCTCCGTGTCAAAAAGAAAAGAGGCTGCTTTGTCCATGTGGAAAAGCATTCACGGGAA
GATCGTATGTACCTTTTTTGAGCACGTTGGTGACCTTGAGCAGGAAATGCTGAAAATATTTGATGCAATGGCCGAAATTAGAGATAGCCAATTGGAGGAAAAGAAGCTCC
ACTTAGAAAAGGCCTTATCTATTGAAAGTCGTGTTGCTGAGGAGAAGGATGTACTTCAGAAGAAACTTGTTTGCTCTGTCTCAGAGGTAGCAGAATTAAAGGTCAAGGTA
GCGAAATTAGAGGCCAAATTGAAAACTACAGAGACTAAGTCAGAAAAGCTTTCCAATTCGCTTTCCGAGAAGGAAAAGGACCTAGATCGAGAAAGACTAGTGGTTTCACA
AATACGCGAGGAGATTGGTAGCGTCGAGTGTGCCCCCACTATCAGCGCCTTAGACGTTCAAACTCTATCGACACTCCATGGACTTTTGGAGGGTACCCGCGATGAGCTGA
AGGAACTTTAG
Protein sequenceShow/hide protein sequence
MWHASLPSRNDKAEILEDVKDPRDQTTRSYDKWWSQKHGHYLEEGIQLLVNSFTIPSTKPKPHKDLDTKKAGKRVIEALTRPMNNLRDEEESHSSNDDRHWKRPKKVPLE
DQSLTSPNAFASTSKNIGSVSKRKEAALSMWKSIHGKIVCTFFEHVGDLEQEMLKIFDAMAEIRDSQLEEKKLHLEKALSIESRVAEEKDVLQKKLVCSVSEVAELKVKV
AKLEAKLKTTETKSEKLSNSLSEKEKDLDRERLVVSQIREEIGSVECAPTISALDVQTLSTLHGLLEGTRDELKEL