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Spg020344 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020344
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUbiquitin-40S ribosomal protein S27a
Genome locationscaffold1:22651371..22653907
RNA-Seq ExpressionSpg020344
SyntenySpg020344
Gene Ontology termsGO:0009834 - plant-type secondary cell wall biogenesis (biological process)
GO:0010411 - xyloglucan metabolic process (biological process)
GO:0045492 - xylan biosynthetic process (biological process)
GO:1990937 - xylan acetylation (biological process)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016407 - acetyltransferase activity (molecular function)
InterPro domainsIPR038582 - S27a-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU40655.1 hypothetical protein TSUD_83340 [Trifolium subterraneum]1.3e-2367.86Show/hide
Query:  ELHSVTAKLLCDPFCVAWQDYIGDVYFTVPYMVEVSLWIFELTNTLKTTFVPTKDNRRLLHNFLAGASISVCLYCILLVVLLIP
        E HS   + L DP CVAWQDY GDV+FTV ++VE+S  +FELTNTLKT FVPTKDNRRLLHNF+ G +ISV LYCI L++L+IP
Subjt:  ELHSVTAKLLCDPFCVAWQDYIGDVYFTVPYMVEVSLWIFELTNTLKTTFVPTKDNRRLLHNFLAGASISVCLYCILLVVLLIP

KAA0052563.1 protein REDUCED WALL ACETYLATION 3-like [Cucumis melo var. makuwa]1.7e-1584.48Show/hide
Query:  TVPYMVEVSLWIFELTNTLKTTFVPTKDNRRLLHNFLAGASISVCLYCILLVVLLIPH
        T    V VSL IFELTNTLKTTFVPTKDNRRLLHNFLAGA+ISVCLYCI LV+LLIPH
Subjt:  TVPYMVEVSLWIFELTNTLKTTFVPTKDNRRLLHNFLAGASISVCLYCILLVVLLIPH

KAG6420560.1 hypothetical protein SASPL_117093 [Salvia splendens]3.4e-1655.84Show/hide
Query:  VICELHSVTAKLLCDPFCVAWQDYIGDVYFTVPYMVEVSLWIFELTNTLKTTFVPTKDNRRLLHNFLAGASISVCLY
        +  E     ++L  D FCVAW++Y GD+YF VPY+ EVS  IFELTNTLK+ F+PT+D+++LL+NF A A ISVCL+
Subjt:  VICELHSVTAKLLCDPFCVAWQDYIGDVYFTVPYMVEVSLWIFELTNTLKTTFVPTKDNRRLLHNFLAGASISVCLY

TYK13262.1 protein REDUCED WALL ACETYLATION 3-like [Cucumis melo var. makuwa]1.7e-1584.48Show/hide
Query:  TVPYMVEVSLWIFELTNTLKTTFVPTKDNRRLLHNFLAGASISVCLYCILLVVLLIPH
        T    V VSL IFELTNTLKTTFVPTKDNRRLLHNFLAGA+ISVCLYCI LV+LLIPH
Subjt:  TVPYMVEVSLWIFELTNTLKTTFVPTKDNRRLLHNFLAGASISVCLYCILLVVLLIPH

XP_038883713.1 protein REDUCED WALL ACETYLATION 3 [Benincasa hispida]1.3e-1586.21Show/hide
Query:  TVPYMVEVSLWIFELTNTLKTTFVPTKDNRRLLHNFLAGASISVCLYCILLVVLLIPH
        T    V VSL IFELTNTLKTTFVPTKDNRRLLHNFLAGA+ISVCLYCI LVVLLIPH
Subjt:  TVPYMVEVSLWIFELTNTLKTTFVPTKDNRRLLHNFLAGASISVCLYCILLVVLLIPH

TrEMBL top hitse value%identityAlignment
A0A1S3AZX2 protein REDUCED WALL ACETYLATION 3-like8.1e-1684.48Show/hide
Query:  TVPYMVEVSLWIFELTNTLKTTFVPTKDNRRLLHNFLAGASISVCLYCILLVVLLIPH
        T    V VSL IFELTNTLKTTFVPTKDNRRLLHNFLAGA+ISVCLYCI LV+LLIPH
Subjt:  TVPYMVEVSLWIFELTNTLKTTFVPTKDNRRLLHNFLAGASISVCLYCILLVVLLIPH

A0A2Z6NXJ2 Cas1_AcylT domain-containing protein6.2e-2467.86Show/hide
Query:  ELHSVTAKLLCDPFCVAWQDYIGDVYFTVPYMVEVSLWIFELTNTLKTTFVPTKDNRRLLHNFLAGASISVCLYCILLVVLLIP
        E HS   + L DP CVAWQDY GDV+FTV ++VE+S  +FELTNTLKT FVPTKDNRRLLHNF+ G +ISV LYCI L++L+IP
Subjt:  ELHSVTAKLLCDPFCVAWQDYIGDVYFTVPYMVEVSLWIFELTNTLKTTFVPTKDNRRLLHNFLAGASISVCLYCILLVVLLIP

A0A5A7U9J0 Protein REDUCED WALL ACETYLATION 3-like8.1e-1684.48Show/hide
Query:  TVPYMVEVSLWIFELTNTLKTTFVPTKDNRRLLHNFLAGASISVCLYCILLVVLLIPH
        T    V VSL IFELTNTLKTTFVPTKDNRRLLHNFLAGA+ISVCLYCI LV+LLIPH
Subjt:  TVPYMVEVSLWIFELTNTLKTTFVPTKDNRRLLHNFLAGASISVCLYCILLVVLLIPH

A0A5D3CPH4 Protein REDUCED WALL ACETYLATION 3-like8.1e-1684.48Show/hide
Query:  TVPYMVEVSLWIFELTNTLKTTFVPTKDNRRLLHNFLAGASISVCLYCILLVVLLIPH
        T    V VSL IFELTNTLKTTFVPTKDNRRLLHNFLAGA+ISVCLYCI LV+LLIPH
Subjt:  TVPYMVEVSLWIFELTNTLKTTFVPTKDNRRLLHNFLAGASISVCLYCILLVVLLIPH

A0A6J1ISH4 protein REDUCED WALL ACETYLATION 3 isoform X21.2e-1481.03Show/hide
Query:  TVPYMVEVSLWIFELTNTLKTTFVPTKDNRRLLHNFLAGASISVCLYCILLVVLLIPH
        T    V VSL IFELTNTLK+TFVPTKDNRRLLHN LAGA+ISVCLYCI LV+LLIPH
Subjt:  TVPYMVEVSLWIFELTNTLKTTFVPTKDNRRLLHNFLAGASISVCLYCILLVVLLIPH

SwissProt top hitse value%identityAlignment
P31753 Ubiquitin-40S ribosomal protein S27a (Fragment)9.9e-1165Show/hide
Query:  MLHLREGAKKR-KKTYTKPKKFKHKCKKVKLAILQFYKVDDSGKGILILQKLISPNCMNG
        +L LR GAKKR KKTYTKPKK KHK KKVKLA+LQFYKVDD+GK I + ++  +  C  G
Subjt:  MLHLREGAKKR-KKTYTKPKKFKHKCKKVKLAILQFYKVDDSGKGILILQKLISPNCMNG

P47905 Ubiquitin-40S ribosomal protein S27a2.2e-1084.09Show/hide
Query:  MLHLREGAKKR-KKTYTKPKKFKHKCKKVKLAILQFYKVDDSGK
        +L LR GAKKR KKTYTKPKK KHK KKVKLA+LQFYKVDDSGK
Subjt:  MLHLREGAKKR-KKTYTKPKKFKHKCKKVKLAILQFYKVDDSGK

P62980 Ubiquitin-40S ribosomal protein S27a4.9e-1081.82Show/hide
Query:  MLHLREGAKKR-KKTYTKPKKFKHKCKKVKLAILQFYKVDDSGK
        +L LR GAKKR KKTYTKPKK KHK KKVKLA+LQFYKVDD+GK
Subjt:  MLHLREGAKKR-KKTYTKPKKFKHKCKKVKLAILQFYKVDDSGK

Q66GQ5 Protein REDUCED WALL ACETYLATION 35.8e-1166.04Show/hide
Query:  VEVSLWIFELTNTLKTTFVPTKDNRRLLHNFLAGASISVCLYCILLVVLLIPH
        V VS  +FELTNTLK+ F+PTKD++RLLHN LAGA+IS CLY   L++L IPH
Subjt:  VEVSLWIFELTNTLKTTFVPTKDNRRLLHNFLAGASISVCLYCILLVVLLIPH

Q9FXG3 Protein REDUCED WALL ACETYLATION 42.6e-1162.07Show/hide
Query:  TVPYMVEVSLWIFELTNTLKTTFVPTKDNRRLLHNFLAGASISVCLYCILLVVLLIPH
        T    V VS+ +FELTNTLK+ F+PTKD++RLLHN +A A+IS CLY I L++LLIPH
Subjt:  TVPYMVEVSLWIFELTNTLKTTFVPTKDNRRLLHNFLAGASISVCLYCILLVVLLIPH

Arabidopsis top hitse value%identityAlignment
AT1G29890.1 O-acetyltransferase family protein1.9e-1262.07Show/hide
Query:  TVPYMVEVSLWIFELTNTLKTTFVPTKDNRRLLHNFLAGASISVCLYCILLVVLLIPH
        T    V VS+ +FELTNTLK+ F+PTKD++RLLHN +A A+IS CLY I L++LLIPH
Subjt:  TVPYMVEVSLWIFELTNTLKTTFVPTKDNRRLLHNFLAGASISVCLYCILLVVLLIPH

AT1G29890.2 O-acetyltransferase family protein1.9e-1262.07Show/hide
Query:  TVPYMVEVSLWIFELTNTLKTTFVPTKDNRRLLHNFLAGASISVCLYCILLVVLLIPH
        T    V VS+ +FELTNTLK+ F+PTKD++RLLHN +A A+IS CLY I L++LLIPH
Subjt:  TVPYMVEVSLWIFELTNTLKTTFVPTKDNRRLLHNFLAGASISVCLYCILLVVLLIPH

AT2G34410.1 O-acetyltransferase family protein4.1e-1266.04Show/hide
Query:  VEVSLWIFELTNTLKTTFVPTKDNRRLLHNFLAGASISVCLYCILLVVLLIPH
        V VS  +FELTNTLK+ F+PTKD++RLLHN LAGA+IS CLY   L++L IPH
Subjt:  VEVSLWIFELTNTLKTTFVPTKDNRRLLHNFLAGASISVCLYCILLVVLLIPH

AT2G34410.2 O-acetyltransferase family protein4.1e-1266.04Show/hide
Query:  VEVSLWIFELTNTLKTTFVPTKDNRRLLHNFLAGASISVCLYCILLVVLLIPH
        V VS  +FELTNTLK+ F+PTKD++RLLHN LAGA+IS CLY   L++L IPH
Subjt:  VEVSLWIFELTNTLKTTFVPTKDNRRLLHNFLAGASISVCLYCILLVVLLIPH

AT2G34410.3 O-acetyltransferase family protein4.1e-1266.04Show/hide
Query:  VEVSLWIFELTNTLKTTFVPTKDNRRLLHNFLAGASISVCLYCILLVVLLIPH
        V VS  +FELTNTLK+ F+PTKD++RLLHN LAGA+IS CLY   L++L IPH
Subjt:  VEVSLWIFELTNTLKTTFVPTKDNRRLLHNFLAGASISVCLYCILLVVLLIPH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCCATCTCAGGGAAGGCGCTAAGAAGCGTAAGAAGACCTACACCAAGCCCAAGAAGTTCAAGCACAAGTGCAAGAAGGTCAAGCTTGCCATCCTACAGTTCTACAA
GGTCGATGACTCTGGAAAGGGTATACTGATCCTGCAAAAGTTGATCTCCCCAAACTGCATGAATGGTATTTTAGATCTGGCCTGGTCTATATCTGGATCATCGGCATCAT
ATATGCATACTATCACCCCAATGTTGAAAAATGGATGGAAAAATTGGAGGAAGCTGAAACAAAGAAGAGAATTTCAATCAAGACAAGCATTGTCACCGTTTCTGTTATAT
TCTATGGATCTTATTCTGATTTCCATGATTAGGCTGGTTATATGTGAACTTCACTCAGTAACTGCGAAGCTACTCTGTGACCCATTTTGCGTGGCTTGGCAAGATTACAT
TGGAGACGTATATTTCACAGTTCCATATATGGTTGAGGTCTCCCTCTGGATTTTTGAGTTAACCAATACACTAAAGACAACTTTTGTACCTACAAAAGACAATAGACGGT
TGTTGCATAATTTCCTTGCTGGAGCTTCAATTTCTGTATGTTTATATTGCATCTTGCTGGTTGTTCTTCTGATCCCTCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTCCATCTCAGGGAAGGCGCTAAGAAGCGTAAGAAGACCTACACCAAGCCCAAGAAGTTCAAGCACAAGTGCAAGAAGGTCAAGCTTGCCATCCTACAGTTCTACAA
GGTCGATGACTCTGGAAAGGGTATACTGATCCTGCAAAAGTTGATCTCCCCAAACTGCATGAATGGTATTTTAGATCTGGCCTGGTCTATATCTGGATCATCGGCATCAT
ATATGCATACTATCACCCCAATGTTGAAAAATGGATGGAAAAATTGGAGGAAGCTGAAACAAAGAAGAGAATTTCAATCAAGACAAGCATTGTCACCGTTTCTGTTATAT
TCTATGGATCTTATTCTGATTTCCATGATTAGGCTGGTTATATGTGAACTTCACTCAGTAACTGCGAAGCTACTCTGTGACCCATTTTGCGTGGCTTGGCAAGATTACAT
TGGAGACGTATATTTCACAGTTCCATATATGGTTGAGGTCTCCCTCTGGATTTTTGAGTTAACCAATACACTAAAGACAACTTTTGTACCTACAAAAGACAATAGACGGT
TGTTGCATAATTTCCTTGCTGGAGCTTCAATTTCTGTATGTTTATATTGCATCTTGCTGGTTGTTCTTCTGATCCCTCATTAA
Protein sequenceShow/hide protein sequence
MLHLREGAKKRKKTYTKPKKFKHKCKKVKLAILQFYKVDDSGKGILILQKLISPNCMNGILDLAWSISGSSASYMHTITPMLKNGWKNWRKLKQRREFQSRQALSPFLLY
SMDLILISMIRLVICELHSVTAKLLCDPFCVAWQDYIGDVYFTVPYMVEVSLWIFELTNTLKTTFVPTKDNRRLLHNFLAGASISVCLYCILLVVLLIPH