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Spg020390 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020390
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPlant transposase
Genome locationscaffold1:34315515..34319151
RNA-Seq ExpressionSpg020390
SyntenySpg020390
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054504.1 putative TNP1-like transposon protein [Cucumis melo var. makuwa]2.8e-2965.04Show/hide
Query:  EHIEQTDVETITSPNNVVEDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQRDNKVTMLEKECLRMKE----------KMMEMESFMRSFIKKQVEPSEEL
        E IEQT+ ETI S  NVV+DALSKVLGPDRGHVRGFGFGVTRSKLSLLSQ+D+K  +LEKE L+MKE          +M+EM++ M S++KKQ EPSEEL
Subjt:  EHIEQTDVETITSPNNVVEDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQRDNKVTMLEKECLRMKE----------KMMEMESFMRSFIKKQVEPSEEL

Query:  SNATASVPKPTNVHSTFPIPSPS
        SN TASV K  N+    P+PSPS
Subjt:  SNATASVPKPTNVHSTFPIPSPS

KAA0060366.1 Plant transposase [Cucumis melo var. makuwa]4.3e-3063.85Show/hide
Query:  EHIEQTDVETITSPNNVVEDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQRDNKVTMLEKECLRMKE----------KMMEMESFMRSFIKKQVEPSEEL
        E IEQT+ ET  S  NVV+DALSKVLGPD GHVRGFGFGVTRSKLSLLSQ+D+K  +LEKE L+MKE          +M+EM++ M S++KKQ EPSEEL
Subjt:  EHIEQTDVETITSPNNVVEDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQRDNKVTMLEKECLRMKE----------KMMEMESFMRSFIKKQVEPSEEL

Query:  SNATASVPKPTNVHSTFPIPSPSVNLIFSV
        SNATASV K  N+    P+PSPS+NL FS+
Subjt:  SNATASVPKPTNVHSTFPIPSPSVNLIFSV

KAA0066537.1 Plant transposase [Cucumis melo var. makuwa]3.6e-2965.04Show/hide
Query:  EHIEQTDVETITSPNNVVEDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQRDNKVTMLEKECLRMKE----------KMMEMESFMRSFIKKQVEPSEEL
        E IEQT+ ET  S  NVV+DALSKVLGPDRGHVRGFGFGVTRSKLSLLSQ+D+K  +LEKE L+MKE          +M+EM++ M S++KKQ EPSEEL
Subjt:  EHIEQTDVETITSPNNVVEDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQRDNKVTMLEKECLRMKE----------KMMEMESFMRSFIKKQVEPSEEL

Query:  SNATASVPKPTNVHSTFPIPSPS
        SNATASV K  N+    P+PSPS
Subjt:  SNATASVPKPTNVHSTFPIPSPS

TYK07512.1 uncharacterized protein E5676_scaffold1702G00300 [Cucumis melo var. makuwa]1.4e-2864.23Show/hide
Query:  EHIEQTDVETITSPNNVVEDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQRDNKVTMLEKECLRMKE----------KMMEMESFMRSFIKKQVEPSEEL
        E IEQT+ ET  S  NVV+DALSKVLGPDRGHVRGFGFGVTRSKLSLLS +D+K  +LEKE L+MKE          +M+EM++ M S++KKQ EPSEEL
Subjt:  EHIEQTDVETITSPNNVVEDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQRDNKVTMLEKECLRMKE----------KMMEMESFMRSFIKKQVEPSEEL

Query:  SNATASVPKPTNVHSTFPIPSPS
        SNATASV K  N+    P+PSPS
Subjt:  SNATASVPKPTNVHSTFPIPSPS

TYK25923.1 Plant transposase [Cucumis melo var. makuwa]3.6e-2965.04Show/hide
Query:  EHIEQTDVETITSPNNVVEDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQRDNKVTMLEKECLRMKE----------KMMEMESFMRSFIKKQVEPSEEL
        E IEQT+ ET  S  NVV+DALSKVLGPDRGHVRGFGFGVTRSKLSLLSQ+D+K  +LEKE L+MKE          +M+EM++ M S++KKQ EPSEEL
Subjt:  EHIEQTDVETITSPNNVVEDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQRDNKVTMLEKECLRMKE----------KMMEMESFMRSFIKKQVEPSEEL

Query:  SNATASVPKPTNVHSTFPIPSPS
        SNATASV K  N+    P+PSPS
Subjt:  SNATASVPKPTNVHSTFPIPSPS

TrEMBL top hitse value%identityAlignment
A0A5A7UH86 Putative TNP1-like transposon protein1.4e-2965.04Show/hide
Query:  EHIEQTDVETITSPNNVVEDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQRDNKVTMLEKECLRMKE----------KMMEMESFMRSFIKKQVEPSEEL
        E IEQT+ ETI S  NVV+DALSKVLGPDRGHVRGFGFGVTRSKLSLLSQ+D+K  +LEKE L+MKE          +M+EM++ M S++KKQ EPSEEL
Subjt:  EHIEQTDVETITSPNNVVEDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQRDNKVTMLEKECLRMKE----------KMMEMESFMRSFIKKQVEPSEEL

Query:  SNATASVPKPTNVHSTFPIPSPS
        SN TASV K  N+    P+PSPS
Subjt:  SNATASVPKPTNVHSTFPIPSPS

A0A5A7V1K6 Plant transposase2.1e-3063.85Show/hide
Query:  EHIEQTDVETITSPNNVVEDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQRDNKVTMLEKECLRMKE----------KMMEMESFMRSFIKKQVEPSEEL
        E IEQT+ ET  S  NVV+DALSKVLGPD GHVRGFGFGVTRSKLSLLSQ+D+K  +LEKE L+MKE          +M+EM++ M S++KKQ EPSEEL
Subjt:  EHIEQTDVETITSPNNVVEDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQRDNKVTMLEKECLRMKE----------KMMEMESFMRSFIKKQVEPSEEL

Query:  SNATASVPKPTNVHSTFPIPSPSVNLIFSV
        SNATASV K  N+    P+PSPS+NL FS+
Subjt:  SNATASVPKPTNVHSTFPIPSPSVNLIFSV

A0A5A7VHH9 Plant transposase1.8e-2965.04Show/hide
Query:  EHIEQTDVETITSPNNVVEDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQRDNKVTMLEKECLRMKE----------KMMEMESFMRSFIKKQVEPSEEL
        E IEQT+ ET  S  NVV+DALSKVLGPDRGHVRGFGFGVTRSKLSLLSQ+D+K  +LEKE L+MKE          +M+EM++ M S++KKQ EPSEEL
Subjt:  EHIEQTDVETITSPNNVVEDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQRDNKVTMLEKECLRMKE----------KMMEMESFMRSFIKKQVEPSEEL

Query:  SNATASVPKPTNVHSTFPIPSPS
        SNATASV K  N+    P+PSPS
Subjt:  SNATASVPKPTNVHSTFPIPSPS

A0A5D3DCM2 Uncharacterized protein6.7e-2964.23Show/hide
Query:  EHIEQTDVETITSPNNVVEDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQRDNKVTMLEKECLRMKE----------KMMEMESFMRSFIKKQVEPSEEL
        E IEQT+ ET  S  NVV+DALSKVLGPDRGHVRGFGFGVTRSKLSLLS +D+K  +LEKE L+MKE          +M+EM++ M S++KKQ EPSEEL
Subjt:  EHIEQTDVETITSPNNVVEDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQRDNKVTMLEKECLRMKE----------KMMEMESFMRSFIKKQVEPSEEL

Query:  SNATASVPKPTNVHSTFPIPSPS
        SNATASV K  N+    P+PSPS
Subjt:  SNATASVPKPTNVHSTFPIPSPS

A0A5D3DQI7 Plant transposase1.8e-2965.04Show/hide
Query:  EHIEQTDVETITSPNNVVEDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQRDNKVTMLEKECLRMKE----------KMMEMESFMRSFIKKQVEPSEEL
        E IEQT+ ET  S  NVV+DALSKVLGPDRGHVRGFGFGVTRSKLSLLSQ+D+K  +LEKE L+MKE          +M+EM++ M S++KKQ EPSEEL
Subjt:  EHIEQTDVETITSPNNVVEDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQRDNKVTMLEKECLRMKE----------KMMEMESFMRSFIKKQVEPSEEL

Query:  SNATASVPKPTNVHSTFPIPSPS
        SNATASV K  N+    P+PSPS
Subjt:  SNATASVPKPTNVHSTFPIPSPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGATGAAATGGGAGGAAATAAGCATCCACTCCCTACTAAAAAACGTAAACAAGATTTGTTGGGGCCAAAAGTAGTAGGAAAGAAGAGGTCTACACTCACTAAACA
TTTACAATCTTGTGGGGAATCATGTTCTATCAATTCATCCATGAATGAGAGTTGTGATGAAAATAGAGAGAAACAAAGTGATTTAAGGGATAATGGTGTGAATGTTCCTA
AAAAAGCTTTACGAAGAAAGATTTGTAGTGAGGAGATGTCGAATGACCACCAACTTGAAAAGGTAGTTGTCCATAGAGAAAAATCATATATGTCTCACAATGATCAAGAT
AGTAGCTTGCCTCTTCCAAATGATGTCAATATGGAAAGATCTTCAATTAATGCCCACCCTCAAGATTTCTCACCTGATCCTAAAGAAAAGACAGTTAAAGATAATCCAAT
TCCAGTTCCTACATTAGACTCACCTGCTAATCGAACAAGATTATCACTTCGTAGGCAAGAACATATTGAACAAACTGATGTTGAGACAATAACTTCTCCAAATAACGTGG
TTGAGGATGCATTGAGTAAAGTTCTTGGTCCTGATCGTGGGCATGTAAGAGGATTTGGATTTGGTGTGACTCGCTCAAAATTATCTCTTCTTTCGCAACGAGATAACAAG
GTCACAATGCTTGAAAAAGAATGTTTAAGGATGAAGGAGAAAATGATGGAAATGGAATCATTCATGAGATCTTTTATTAAAAAGCAGGTTGAACCAAGTGAGGAACTTTC
AAATGCAACTGCAAGTGTACCTAAGCCAACAAATGTTCATTCAACTTTTCCTATACCATCTCCATCGGTAAATTTAATTTTTAGTGTAGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGACAGATGAAATGGGAGGAAATAAGCATCCACTCCCTACTAAAAAACGTAAACAAGATTTGTTGGGGCCAAAAGTAGTAGGAAAGAAGAGGTCTACACTCACTAAACA
TTTACAATCTTGTGGGGAATCATGTTCTATCAATTCATCCATGAATGAGAGTTGTGATGAAAATAGAGAGAAACAAAGTGATTTAAGGGATAATGGTGTGAATGTTCCTA
AAAAAGCTTTACGAAGAAAGATTTGTAGTGAGGAGATGTCGAATGACCACCAACTTGAAAAGGTAGTTGTCCATAGAGAAAAATCATATATGTCTCACAATGATCAAGAT
AGTAGCTTGCCTCTTCCAAATGATGTCAATATGGAAAGATCTTCAATTAATGCCCACCCTCAAGATTTCTCACCTGATCCTAAAGAAAAGACAGTTAAAGATAATCCAAT
TCCAGTTCCTACATTAGACTCACCTGCTAATCGAACAAGATTATCACTTCGTAGGCAAGAACATATTGAACAAACTGATGTTGAGACAATAACTTCTCCAAATAACGTGG
TTGAGGATGCATTGAGTAAAGTTCTTGGTCCTGATCGTGGGCATGTAAGAGGATTTGGATTTGGTGTGACTCGCTCAAAATTATCTCTTCTTTCGCAACGAGATAACAAG
GTCACAATGCTTGAAAAAGAATGTTTAAGGATGAAGGAGAAAATGATGGAAATGGAATCATTCATGAGATCTTTTATTAAAAAGCAGGTTGAACCAAGTGAGGAACTTTC
AAATGCAACTGCAAGTGTACCTAAGCCAACAAATGTTCATTCAACTTTTCCTATACCATCTCCATCGGTAAATTTAATTTTTAGTGTAGTATGA
Protein sequenceShow/hide protein sequence
MTDEMGGNKHPLPTKKRKQDLLGPKVVGKKRSTLTKHLQSCGESCSINSSMNESCDENREKQSDLRDNGVNVPKKALRRKICSEEMSNDHQLEKVVVHREKSYMSHNDQD
SSLPLPNDVNMERSSINAHPQDFSPDPKEKTVKDNPIPVPTLDSPANRTRLSLRRQEHIEQTDVETITSPNNVVEDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQRDNK
VTMLEKECLRMKEKMMEMESFMRSFIKKQVEPSEELSNATASVPKPTNVHSTFPIPSPSVNLIFSVV