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Spg020410 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020410
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionmyb family transcription factor PHL5-like
Genome locationscaffold1:35321483..35321974
RNA-Seq ExpressionSpg020410
SyntenySpg020410
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595577.1 Myb family transcription factor PHL5, partial [Cucurbita argyrosperma subsp. sororia]1.9e-5471.95Show/hide
Query:  MNDYGIDLKQEIQQNPGVIADYYSQNFRAEQPWGMGTCVHLSAMDEIESFDQKKFGSSKSSSTIINLIESPALAFSATEQYMGIPSIEL-TGSSSFNRAS
        MNDYGID  QEIQQ+ G++AD + QNFRA+QPWGMG CV L +MDE+ES +Q+ FGSSK SSTIINL ESPA AF ATEQ MGIP IE  TGSSSF+R S
Subjt:  MNDYGIDLKQEIQQNPGVIADYYSQNFRAEQPWGMGTCVHLSAMDEIESFDQKKFGSSKSSSTIINLIESPALAFSATEQYMGIPSIEL-TGSSSFNRAS

Query:  DSLSTIFQSSGENFSPHSVEQSGADSEFRNTLQSVVKTQLCKRSFNGFPKSIFTNHKVFDDGSY
        DS+S IFQSSGEN S    E+SGADSEFRNTLQSVVK+QLCKR F+GFPKS  ++HKVFDD S+
Subjt:  DSLSTIFQSSGENFSPHSVEQSGADSEFRNTLQSVVKTQLCKRSFNGFPKSIFTNHKVFDDGSY

KAG7027559.1 Myb family transcription factor PHL5 [Cucurbita argyrosperma subsp. argyrosperma]4.1e-5471.95Show/hide
Query:  MNDYGIDLKQEIQQNPGVIADYYSQNFRAEQPWGMGTCVHLSAMDEIESFDQKKFGSSKSSSTIINLIESPALAFSATEQYMGIPSIEL-TGSSSFNRAS
        MNDYGID  QEIQQ+ G++AD + QNFRA+QPW MG CV L +MDE+ES +Q+ FGSSKSSSTIINL ESPA AF ATEQ MGIP IE  TGSSSF+R S
Subjt:  MNDYGIDLKQEIQQNPGVIADYYSQNFRAEQPWGMGTCVHLSAMDEIESFDQKKFGSSKSSSTIINLIESPALAFSATEQYMGIPSIEL-TGSSSFNRAS

Query:  DSLSTIFQSSGENFSPHSVEQSGADSEFRNTLQSVVKTQLCKRSFNGFPKSIFTNHKVFDDGSY
        DS+S IFQSSGEN S    E+SGADSEFRNTLQSVVK+QLCKR F+GFPKS  ++HKVFDD S+
Subjt:  DSLSTIFQSSGENFSPHSVEQSGADSEFRNTLQSVVKTQLCKRSFNGFPKSIFTNHKVFDDGSY

XP_022924882.1 uncharacterized protein LOC111432301 [Cucurbita moschata]1.2e-5371.95Show/hide
Query:  MNDYGIDLKQEIQQNPGVIADYYSQNFRAEQPWGMGTCVHLSAMDEIESFDQKKFGSSKSSSTIINLIESPALAFSATEQYMGIPSIEL-TGSSSFNRAS
        MNDYGID  QEIQQ+ G++AD + QNF A+QPW MG CV L AMDE+ES +Q+ FGSSKSSSTIINL ESPA AF ATEQ MGIP IE  TGSSSF+R S
Subjt:  MNDYGIDLKQEIQQNPGVIADYYSQNFRAEQPWGMGTCVHLSAMDEIESFDQKKFGSSKSSSTIINLIESPALAFSATEQYMGIPSIEL-TGSSSFNRAS

Query:  DSLSTIFQSSGENFSPHSVEQSGADSEFRNTLQSVVKTQLCKRSFNGFPKSIFTNHKVFDDGSY
        DS+S IFQSSGEN S    E+SGADSEFRNTLQSVVK+QLCKR F+GFPKS  ++HKVFDD S+
Subjt:  DSLSTIFQSSGENFSPHSVEQSGADSEFRNTLQSVVKTQLCKRSFNGFPKSIFTNHKVFDDGSY

XP_022966364.1 myb family transcription factor PHL5-like [Cucurbita maxima]8.3e-5572.56Show/hide
Query:  MNDYGIDLKQEIQQNPGVIADYYSQNFRAEQPWGMGTCVHLSAMDEIESFDQKKFGSSKSSSTIINLIESPALAFSATEQYMGIPSIEL-TGSSSFNRAS
        MNDYGID  QEI+QN G++AD + QNFRA+QPW MGTCV L AMDE+ES +Q+ FGSSKSSSTIINL ESPA AF ATEQ MGIP IE  TGSSSF+R S
Subjt:  MNDYGIDLKQEIQQNPGVIADYYSQNFRAEQPWGMGTCVHLSAMDEIESFDQKKFGSSKSSSTIINLIESPALAFSATEQYMGIPSIEL-TGSSSFNRAS

Query:  DSLSTIFQSSGENFSPHSVEQSGADSEFRNTLQSVVKTQLCKRSFNGFPKSIFTNHKVFDDGSY
        DS+S IFQSSGEN S    E+SGADSEFRNTLQSVVK+QLCKR F+GFPKS  ++HK+FDD S+
Subjt:  DSLSTIFQSSGENFSPHSVEQSGADSEFRNTLQSVVKTQLCKRSFNGFPKSIFTNHKVFDDGSY

XP_023517343.1 myb family transcription factor PHL4-like [Cucurbita pepo subsp. pepo]2.9e-5573.17Show/hide
Query:  MNDYGIDLKQEIQQNPGVIADYYSQNFRAEQPWGMGTCVHLSAMDEIESFDQKKFGSSKSSSTIINLIESPALAFSATEQYMGIPSIEL-TGSSSFNRAS
        MND+GID  QEIQQN G++AD + QNFRA+QPW MGTCV L AM+E+ES +Q+ FGSSKSSSTIINL ESPA AF ATEQ MGIP IE  TGSSSF+RAS
Subjt:  MNDYGIDLKQEIQQNPGVIADYYSQNFRAEQPWGMGTCVHLSAMDEIESFDQKKFGSSKSSSTIINLIESPALAFSATEQYMGIPSIEL-TGSSSFNRAS

Query:  DSLSTIFQSSGENFSPHSVEQSGADSEFRNTLQSVVKTQLCKRSFNGFPKSIFTNHKVFDDGSY
        DS+S IFQSSGEN S    E+SGADSEFRNTLQSVVK+QLCKR F+GFPKS  ++HKVFDD S+
Subjt:  DSLSTIFQSSGENFSPHSVEQSGADSEFRNTLQSVVKTQLCKRSFNGFPKSIFTNHKVFDDGSY

TrEMBL top hitse value%identityAlignment
A0A1S3B500 uncharacterized protein LOC103486080 isoform X13.5e-5171.17Show/hide
Query:  MNDYGIDLKQEIQQNPGVIADYYSQNFRAEQPWGMGTCVHLSAMDEIESFDQKKFGSSKSSSTIINLIESPALAFSATEQYMGIPSIEL-TGSSSFNRAS
        MN YGID KQEIQQN G+I DYYSQNFRA+QP  MG CVHLSAMDE+ES ++     SK +STIINL ESP  AF ATEQ MGIP I+  +GSSSFN   
Subjt:  MNDYGIDLKQEIQQNPGVIADYYSQNFRAEQPWGMGTCVHLSAMDEIESFDQKKFGSSKSSSTIINLIESPALAFSATEQYMGIPSIEL-TGSSSFNRAS

Query:  DSLSTIFQSSGENFSPHSVEQSGADSEFRNTLQSVVKTQLCKRSFNGFPKSIFTNHKVFDDGS
         SLSTIFQSSGENFS  S EQSG DSEF NTLQSVVK+QLCKRSFNG PK+ F  HKVFD  S
Subjt:  DSLSTIFQSSGENFSPHSVEQSGADSEFRNTLQSVVKTQLCKRSFNGFPKSIFTNHKVFDDGS

A0A5A7TRR1 Protein PHR1-LIKE 1 isoform X23.5e-5171.17Show/hide
Query:  MNDYGIDLKQEIQQNPGVIADYYSQNFRAEQPWGMGTCVHLSAMDEIESFDQKKFGSSKSSSTIINLIESPALAFSATEQYMGIPSIEL-TGSSSFNRAS
        MN YGID KQEIQQN G+I DYYSQNFRA+QP  MG CVHLSAMDE+ES ++     SK +STIINL ESP  AF ATEQ MGIP I+  +GSSSFN   
Subjt:  MNDYGIDLKQEIQQNPGVIADYYSQNFRAEQPWGMGTCVHLSAMDEIESFDQKKFGSSKSSSTIINLIESPALAFSATEQYMGIPSIEL-TGSSSFNRAS

Query:  DSLSTIFQSSGENFSPHSVEQSGADSEFRNTLQSVVKTQLCKRSFNGFPKSIFTNHKVFDDGS
         SLSTIFQSSGENFS  S EQSG DSEF NTLQSVVK+QLCKRSFNG PK+ F  HKVFD  S
Subjt:  DSLSTIFQSSGENFSPHSVEQSGADSEFRNTLQSVVKTQLCKRSFNGFPKSIFTNHKVFDDGS

A0A5D3C537 Protein PHR1-LIKE 1 isoform X23.5e-5171.17Show/hide
Query:  MNDYGIDLKQEIQQNPGVIADYYSQNFRAEQPWGMGTCVHLSAMDEIESFDQKKFGSSKSSSTIINLIESPALAFSATEQYMGIPSIEL-TGSSSFNRAS
        MN YGID KQEIQQN G+I DYYSQNFRA+QP  MG CVHLSAMDE+ES ++     SK +STIINL ESP  AF ATEQ MGIP I+  +GSSSFN   
Subjt:  MNDYGIDLKQEIQQNPGVIADYYSQNFRAEQPWGMGTCVHLSAMDEIESFDQKKFGSSKSSSTIINLIESPALAFSATEQYMGIPSIEL-TGSSSFNRAS

Query:  DSLSTIFQSSGENFSPHSVEQSGADSEFRNTLQSVVKTQLCKRSFNGFPKSIFTNHKVFDDGS
         SLSTIFQSSGENFS  S EQSG DSEF NTLQSVVK+QLCKRSFNG PK+ F  HKVFD  S
Subjt:  DSLSTIFQSSGENFSPHSVEQSGADSEFRNTLQSVVKTQLCKRSFNGFPKSIFTNHKVFDDGS

A0A6J1EA93 uncharacterized protein LOC1114323015.8e-5471.95Show/hide
Query:  MNDYGIDLKQEIQQNPGVIADYYSQNFRAEQPWGMGTCVHLSAMDEIESFDQKKFGSSKSSSTIINLIESPALAFSATEQYMGIPSIEL-TGSSSFNRAS
        MNDYGID  QEIQQ+ G++AD + QNF A+QPW MG CV L AMDE+ES +Q+ FGSSKSSSTIINL ESPA AF ATEQ MGIP IE  TGSSSF+R S
Subjt:  MNDYGIDLKQEIQQNPGVIADYYSQNFRAEQPWGMGTCVHLSAMDEIESFDQKKFGSSKSSSTIINLIESPALAFSATEQYMGIPSIEL-TGSSSFNRAS

Query:  DSLSTIFQSSGENFSPHSVEQSGADSEFRNTLQSVVKTQLCKRSFNGFPKSIFTNHKVFDDGSY
        DS+S IFQSSGEN S    E+SGADSEFRNTLQSVVK+QLCKR F+GFPKS  ++HKVFDD S+
Subjt:  DSLSTIFQSSGENFSPHSVEQSGADSEFRNTLQSVVKTQLCKRSFNGFPKSIFTNHKVFDDGSY

A0A6J1HTK3 myb family transcription factor PHL5-like4.0e-5572.56Show/hide
Query:  MNDYGIDLKQEIQQNPGVIADYYSQNFRAEQPWGMGTCVHLSAMDEIESFDQKKFGSSKSSSTIINLIESPALAFSATEQYMGIPSIEL-TGSSSFNRAS
        MNDYGID  QEI+QN G++AD + QNFRA+QPW MGTCV L AMDE+ES +Q+ FGSSKSSSTIINL ESPA AF ATEQ MGIP IE  TGSSSF+R S
Subjt:  MNDYGIDLKQEIQQNPGVIADYYSQNFRAEQPWGMGTCVHLSAMDEIESFDQKKFGSSKSSSTIINLIESPALAFSATEQYMGIPSIEL-TGSSSFNRAS

Query:  DSLSTIFQSSGENFSPHSVEQSGADSEFRNTLQSVVKTQLCKRSFNGFPKSIFTNHKVFDDGSY
        DS+S IFQSSGEN S    E+SGADSEFRNTLQSVVK+QLCKR F+GFPKS  ++HK+FDD S+
Subjt:  DSLSTIFQSSGENFSPHSVEQSGADSEFRNTLQSVVKTQLCKRSFNGFPKSIFTNHKVFDDGSY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGATTACGGAATCGATTTGAAGCAAGAAATTCAACAAAATCCTGGAGTGATTGCTGATTATTACTCTCAAAATTTTAGGGCAGAGCAGCCCTGGGGGATGGGAAC
TTGTGTTCATCTATCCGCAATGGATGAAATTGAATCATTTGACCAGAAAAAATTTGGTTCGTCTAAATCGAGTTCCACTATCATCAATCTGATCGAATCTCCCGCTTTAG
CGTTCTCTGCGACGGAGCAATATATGGGGATTCCTTCAATTGAGTTGACTGGTTCTTCGTCTTTCAACAGGGCTTCCGATTCACTTTCCACGATTTTTCAATCCTCCGGT
GAAAATTTCTCTCCCCATTCGGTGGAGCAGAGCGGCGCAGACTCTGAATTCAGGAACACCTTGCAATCAGTTGTGAAAACTCAACTCTGTAAGAGAAGCTTCAATGGCTT
CCCAAAGAGTATTTTCACTAATCACAAGGTGTTTGATGATGGTTCTTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACGATTACGGAATCGATTTGAAGCAAGAAATTCAACAAAATCCTGGAGTGATTGCTGATTATTACTCTCAAAATTTTAGGGCAGAGCAGCCCTGGGGGATGGGAAC
TTGTGTTCATCTATCCGCAATGGATGAAATTGAATCATTTGACCAGAAAAAATTTGGTTCGTCTAAATCGAGTTCCACTATCATCAATCTGATCGAATCTCCCGCTTTAG
CGTTCTCTGCGACGGAGCAATATATGGGGATTCCTTCAATTGAGTTGACTGGTTCTTCGTCTTTCAACAGGGCTTCCGATTCACTTTCCACGATTTTTCAATCCTCCGGT
GAAAATTTCTCTCCCCATTCGGTGGAGCAGAGCGGCGCAGACTCTGAATTCAGGAACACCTTGCAATCAGTTGTGAAAACTCAACTCTGTAAGAGAAGCTTCAATGGCTT
CCCAAAGAGTATTTTCACTAATCACAAGGTGTTTGATGATGGTTCTTATTAA
Protein sequenceShow/hide protein sequence
MNDYGIDLKQEIQQNPGVIADYYSQNFRAEQPWGMGTCVHLSAMDEIESFDQKKFGSSKSSSTIINLIESPALAFSATEQYMGIPSIELTGSSSFNRASDSLSTIFQSSG
ENFSPHSVEQSGADSEFRNTLQSVVKTQLCKRSFNGFPKSIFTNHKVFDDGSY