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Spg020438 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020438
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRhodanese domain-containing protein
Genome locationscaffold1:34541980..34543792
RNA-Seq ExpressionSpg020438
SyntenySpg020438
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044615 - Rhodanese-like domain-containing protein 9, chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144667.1 rhodanese-like domain-containing protein 9, chloroplastic [Cucumis sativus]1.1e-3494.05Show/hide
Query:  STAAADKLEKAGFENIACITSGLQSVKPGTFDSVGPTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKLLQMAP
        STAAADKLEKAGFENIACITSGLQSVKPG+FDSVG T+LQDAGKAGLVTIQGKISAVLGTVLICAYLF+T FPEQAEKLLQMAP
Subjt:  STAAADKLEKAGFENIACITSGLQSVKPGTFDSVGPTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKLLQMAP

XP_008442228.1 PREDICTED: rhodanese-like domain-containing protein 9, chloroplastic isoform X1 [Cucumis melo]3.0e-3594.19Show/hide
Query:  STAAADKLEKAGFENIACITSGLQSVKPGTFDSVGPTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKLLQMAPAS
        STAAADKL+KAGFENIACITSGLQSVKPGTF+SVG TELQDAGKAGLVTIQGKISAVLGTVLICAYLFIT FPEQAEKLLQMAP S
Subjt:  STAAADKLEKAGFENIACITSGLQSVKPGTFDSVGPTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKLLQMAPAS

XP_022155002.1 rhodanese-like domain-containing protein 9, chloroplastic isoform X1 [Momordica charantia]1.0e-3595.35Show/hide
Query:  STAAADKLEKAGFENIACITSGLQSVKPGTFDSVGPTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKLLQMAPAS
        STAAAD+LEKAGFENIACITSGLQSVKPGTFDSVG TELQDAGKAGLVTIQGKISAVLGTVLICAYLFIT FPEQAEKLLQMAP S
Subjt:  STAAADKLEKAGFENIACITSGLQSVKPGTFDSVGPTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKLLQMAPAS

XP_022742232.1 rhodanese-like domain-containing protein 9, chloroplastic [Durio zibethinus]2.0e-3491.86Show/hide
Query:  STAAADKLEKAGFENIACITSGLQSVKPGTFDSVGPTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKLLQMAPAS
        S +AA+KLE+AGFENIACITSGLQ+VKPGTFDSVG TELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKLLQM+PAS
Subjt:  STAAADKLEKAGFENIACITSGLQSVKPGTFDSVGPTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKLLQMAPAS

XP_038883761.1 rhodanese-like domain-containing protein 9, chloroplastic [Benincasa hispida]9.4e-3797.67Show/hide
Query:  STAAADKLEKAGFENIACITSGLQSVKPGTFDSVGPTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKLLQMAPAS
        STAAADKLEKAGFENIACITSGLQSVKPGTFDSVG TELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKLLQMAP S
Subjt:  STAAADKLEKAGFENIACITSGLQSVKPGTFDSVGPTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKLLQMAPAS

TrEMBL top hitse value%identityAlignment
A0A0A0L2N4 Rhodanese domain-containing protein5.5e-3594.05Show/hide
Query:  STAAADKLEKAGFENIACITSGLQSVKPGTFDSVGPTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKLLQMAP
        STAAADKLEKAGFENIACITSGLQSVKPG+FDSVG T+LQDAGKAGLVTIQGKISAVLGTVLICAYLF+T FPEQAEKLLQMAP
Subjt:  STAAADKLEKAGFENIACITSGLQSVKPGTFDSVGPTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKLLQMAP

A0A1S3B5W0 rhodanese-like domain-containing protein 9, chloroplastic isoform X11.5e-3594.19Show/hide
Query:  STAAADKLEKAGFENIACITSGLQSVKPGTFDSVGPTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKLLQMAPAS
        STAAADKL+KAGFENIACITSGLQSVKPGTF+SVG TELQDAGKAGLVTIQGKISAVLGTVLICAYLFIT FPEQAEKLLQMAP S
Subjt:  STAAADKLEKAGFENIACITSGLQSVKPGTFDSVGPTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKLLQMAPAS

A0A5A7TCE9 Rhodanese-like domain-containing protein 91.5e-3594.19Show/hide
Query:  STAAADKLEKAGFENIACITSGLQSVKPGTFDSVGPTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKLLQMAPAS
        STAAADKL+KAGFENIACITSGLQSVKPGTF+SVG TELQDAGKAGLVTIQGKISAVLGTVLICAYLFIT FPEQAEKLLQMAP S
Subjt:  STAAADKLEKAGFENIACITSGLQSVKPGTFDSVGPTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKLLQMAPAS

A0A6J1DN76 rhodanese-like domain-containing protein 9, chloroplastic isoform X15.0e-3695.35Show/hide
Query:  STAAADKLEKAGFENIACITSGLQSVKPGTFDSVGPTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKLLQMAPAS
        STAAAD+LEKAGFENIACITSGLQSVKPGTFDSVG TELQDAGKAGLVTIQGKISAVLGTVLICAYLFIT FPEQAEKLLQMAP S
Subjt:  STAAADKLEKAGFENIACITSGLQSVKPGTFDSVGPTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKLLQMAPAS

A0A6P5YPJ0 rhodanese-like domain-containing protein 9, chloroplastic9.4e-3591.86Show/hide
Query:  STAAADKLEKAGFENIACITSGLQSVKPGTFDSVGPTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKLLQMAPAS
        S +AA+KLE+AGFENIACITSGLQ+VKPGTFDSVG TELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKLLQM+PAS
Subjt:  STAAADKLEKAGFENIACITSGLQSVKPGTFDSVGPTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKLLQMAPAS

SwissProt top hitse value%identityAlignment
O48529 Rhodanese-like domain-containing protein 9, chloroplastic2.1e-3183.54Show/hide
Query:  STAAADKLEKAGFENIACITSGLQSVKPGTFDSVGPTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKL
        S AAA +LE+AG+ENIAC+TSGLQSVKPGTF+SVG TELQ+AGKAGL+TIQGKISAVLGTVL+CAYLFI FFP+QAEKL
Subjt:  STAAADKLEKAGFENIACITSGLQSVKPGTFDSVGPTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKL

Arabidopsis top hitse value%identityAlignment
AT2G42220.1 Rhodanese/Cell cycle control phosphatase superfamily protein1.5e-3283.54Show/hide
Query:  STAAADKLEKAGFENIACITSGLQSVKPGTFDSVGPTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKL
        S AAA +LE+AG+ENIAC+TSGLQSVKPGTF+SVG TELQ+AGKAGL+TIQGKISAVLGTVL+CAYLFI FFP+QAEKL
Subjt:  STAAADKLEKAGFENIACITSGLQSVKPGTFDSVGPTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATATTGTCCACTTTGGGCATAAGCCCTCATGGTTTTGCTTTTGGATTACCCCAAAAGGCCTCATACCAATGGAGATACTTGTCCACTGCTGCTGCAGACAAGTTAGA
GAAAGCTGGTTTTGAAAACATAGCATGTATAACATCAGGACTCCAATCTGTAAAACCAGGCACATTTGACTCTGTTGGTCCTACTGAGTTACAAGATGCTGGGAAAGCTG
GTTTGGTGACGATCCAAGGCAAAATTTCGGCTGTACTTGGAACTGTTCTTATCTGTGCATATTTGTTCATAACTTTCTTTCCAGAACAGGCTGAGAAGCTGCTTCAAATG
GCACCAGCTAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATATTGTCCACTTTGGGCATAAGCCCTCATGGTTTTGCTTTTGGATTACCCCAAAAGGCCTCATACCAATGGAGATACTTGTCCACTGCTGCTGCAGACAAGTTAGA
GAAAGCTGGTTTTGAAAACATAGCATGTATAACATCAGGACTCCAATCTGTAAAACCAGGCACATTTGACTCTGTTGGTCCTACTGAGTTACAAGATGCTGGGAAAGCTG
GTTTGGTGACGATCCAAGGCAAAATTTCGGCTGTACTTGGAACTGTTCTTATCTGTGCATATTTGTTCATAACTTTCTTTCCAGAACAGGCTGAGAAGCTGCTTCAAATG
GCACCAGCTAGTTAA
Protein sequenceShow/hide protein sequence
MILSTLGISPHGFAFGLPQKASYQWRYLSTAAADKLEKAGFENIACITSGLQSVKPGTFDSVGPTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKLLQM
APAS