; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg020494 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg020494
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold1:36502034..36507900
RNA-Seq ExpressionSpg020494
SyntenySpg020494
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067918.1 hypothetical protein E6C27_scaffold138G00850 [Cucumis melo var. makuwa]1.5e-1957.14Show/hide
Query:  FFQFLVILGRVNTFDRLSRVKAPVVGPFCCMLCRKAEVNLDHLLWNCEYARSVWSLFFEVFKFRFASHRRCRDTIEEFLLHPPFRKKGKFL
        FF + V+LGRVNT DRL R +   VGPFCCMLC+KAE +LDHL  +C+YAR+VWS F +     FA  R  R TIEEFLLH  F+ +  FL
Subjt:  FFQFLVILGRVNTFDRLSRVKAPVVGPFCCMLCRKAEVNLDHLLWNCEYARSVWSLFFEVFKFRFASHRRCRDTIEEFLLHPPFRKKGKFL

TYK04295.1 serine/threonine-protein phosphatase 4 regulatory subunit 3-like isoform X2 [Cucumis melo var. makuwa]2.5e-1957.14Show/hide
Query:  FFQFLVILGRVNTFDRLSRVKAPVVGPFCCMLCRKAEVNLDHLLWNCEYARSVWSLFFEVFKFRFASHRRCRDTIEEFLLHPPFRKKGKFL
        FF + V+LGRVNT DRL R +   VGPFCCMLC+KAE +LDHL  +C+YAR+VWS F +     FA  R  R TIEEFLLH  F+ +  FL
Subjt:  FFQFLVILGRVNTFDRLSRVKAPVVGPFCCMLCRKAEVNLDHLLWNCEYARSVWSLFFEVFKFRFASHRRCRDTIEEFLLHPPFRKKGKFL

TYK09969.1 calpain-type cysteine protease DEK1 [Cucumis melo var. makuwa]5.4e-3045.51Show/hide
Query:  MKNRTVADILGPVGSSTSFSFGFCRSLSDRETTDIMALLSLIEGASLRSDRRDVRFWSLDPSASFSCRSFFQFLVILGRVNTFDRLS----RVKAPVVGP
        +KN  +AD L   G+S SFSFGF R+LSDRET++++AL+SL+E  S R  RRDV  WS  P   F C+SFFQ LV      T + +S    R+K P    
Subjt:  MKNRTVADILGPVGSSTSFSFGFCRSLSDRETTDIMALLSLIEGASLRSDRRDVRFWSLDPSASFSCRSFFQFLVILGRVNTFDRLS----RVKAPVVGP

Query:  FCCMLCRKAEVNLDHLLWNCEYARSVWSLFFEVFKFRFASHRRCRDTIEEFLLHPPFRKKGKFLWHVGVCAILWGLWG
           +   + E +LDHLLW+CE    VW  F + F   +A HR  R T+EEFLL+ P  ++G FLWH  V A L G  G
Subjt:  FCCMLCRKAEVNLDHLLWNCEYARSVWSLFFEVFKFRFASHRRCRDTIEEFLLHPPFRKKGKFLWHVGVCAILWGLWG

TYK11201.1 SIL1 [Cucumis melo var. makuwa]1.6e-2151Show/hide
Query:  FFQFLVILGRVNTFDRLSRVKAPVVGPFCCMLCRKAEVNLDHLLWNCEYARSVWSLFFEVFKFRFASHRRCRDTIEEFLLHPPFRKKGKFLWHVGVCAIL
        FF   V+LG +NT DRL +    +VGPF C LC+KA+ +LD+L W+C++ R+VW+ F + F   F   R  R TIEEFLLHPPFR+K   LW  GVCA++
Subjt:  FFQFLVILGRVNTFDRLSRVKAPVVGPFCCMLCRKAEVNLDHLLWNCEYARSVWSLFFEVFKFRFASHRRCRDTIEEFLLHPPFRKKGKFLWHVGVCAIL

XP_022151711.1 uncharacterized protein LOC111019624 [Momordica charantia]2.3e-2033.85Show/hide
Query:  TVADILGPVGSSTSFSFGFCRSLSDRETTDIMALLSLIEGASLRSDRRDVRFWSLDPSASFSCRSFFQFLVILGRVNTFDRLSRVKAP-VVGPFCCMLCR
        +VA++L      +S S G  RSL+D E+ +I ALL L+   S  S R DVR W  +P   FSC SFFQ L+     +    LS   +P +V P+      
Subjt:  TVADILGPVGSSTSFSFGFCRSLSDRETTDIMALLSLIEGASLRSDRRDVRFWSLDPSASFSCRSFFQFLVILGRVNTFDRLSRVKAP-VVGPFCCMLCR

Query:  KAEVNLDHLLWNCEYARSVWSLFFEVFKFRFASHRRCRDTIEEFLLHPPFRKKGKFLWHVGVCAILWGLWGERNNRIFRGIERHYCMKTAKSGLH
                 LW  +  +          K +F   +R +      ++ PPFR +G+FLW     A LWG+W ERNNR+FRG+E+     T  + +H
Subjt:  KAEVNLDHLLWNCEYARSVWSLFFEVFKFRFASHRRCRDTIEEFLLHPPFRKKGKFLWHVGVCAILWGLWGERNNRIFRGIERHYCMKTAKSGLH

TrEMBL top hitse value%identityAlignment
A0A5A7VJE4 zf-RVT domain-containing protein7.1e-2057.14Show/hide
Query:  FFQFLVILGRVNTFDRLSRVKAPVVGPFCCMLCRKAEVNLDHLLWNCEYARSVWSLFFEVFKFRFASHRRCRDTIEEFLLHPPFRKKGKFL
        FF + V+LGRVNT DRL R +   VGPFCCMLC+KAE +LDHL  +C+YAR+VWS F +     FA  R  R TIEEFLLH  F+ +  FL
Subjt:  FFQFLVILGRVNTFDRLSRVKAPVVGPFCCMLCRKAEVNLDHLLWNCEYARSVWSLFFEVFKFRFASHRRCRDTIEEFLLHPPFRKKGKFL

A0A5D3BYR2 Serine/threonine-protein phosphatase 4 regulatory subunit 3-like isoform X21.2e-1957.14Show/hide
Query:  FFQFLVILGRVNTFDRLSRVKAPVVGPFCCMLCRKAEVNLDHLLWNCEYARSVWSLFFEVFKFRFASHRRCRDTIEEFLLHPPFRKKGKFL
        FF + V+LGRVNT DRL R +   VGPFCCMLC+KAE +LDHL  +C+YAR+VWS F +     FA  R  R TIEEFLLH  F+ +  FL
Subjt:  FFQFLVILGRVNTFDRLSRVKAPVVGPFCCMLCRKAEVNLDHLLWNCEYARSVWSLFFEVFKFRFASHRRCRDTIEEFLLHPPFRKKGKFL

A0A5D3CHC7 SIL17.6e-2251Show/hide
Query:  FFQFLVILGRVNTFDRLSRVKAPVVGPFCCMLCRKAEVNLDHLLWNCEYARSVWSLFFEVFKFRFASHRRCRDTIEEFLLHPPFRKKGKFLWHVGVCAIL
        FF   V+LG +NT DRL +    +VGPF C LC+KA+ +LD+L W+C++ R+VW+ F + F   F   R  R TIEEFLLHPPFR+K   LW  GVCA++
Subjt:  FFQFLVILGRVNTFDRLSRVKAPVVGPFCCMLCRKAEVNLDHLLWNCEYARSVWSLFFEVFKFRFASHRRCRDTIEEFLLHPPFRKKGKFLWHVGVCAIL

A0A5D3CI74 Calpain-type cysteine protease DEK12.6e-3045.51Show/hide
Query:  MKNRTVADILGPVGSSTSFSFGFCRSLSDRETTDIMALLSLIEGASLRSDRRDVRFWSLDPSASFSCRSFFQFLVILGRVNTFDRLS----RVKAPVVGP
        +KN  +AD L   G+S SFSFGF R+LSDRET++++AL+SL+E  S R  RRDV  WS  P   F C+SFFQ LV      T + +S    R+K P    
Subjt:  MKNRTVADILGPVGSSTSFSFGFCRSLSDRETTDIMALLSLIEGASLRSDRRDVRFWSLDPSASFSCRSFFQFLVILGRVNTFDRLS----RVKAPVVGP

Query:  FCCMLCRKAEVNLDHLLWNCEYARSVWSLFFEVFKFRFASHRRCRDTIEEFLLHPPFRKKGKFLWHVGVCAILWGLWG
           +   + E +LDHLLW+CE    VW  F + F   +A HR  R T+EEFLL+ P  ++G FLWH  V A L G  G
Subjt:  FCCMLCRKAEVNLDHLLWNCEYARSVWSLFFEVFKFRFASHRRCRDTIEEFLLHPPFRKKGKFLWHVGVCAILWGLWG

A0A6J1DFI2 uncharacterized protein LOC1110196241.1e-2033.85Show/hide
Query:  TVADILGPVGSSTSFSFGFCRSLSDRETTDIMALLSLIEGASLRSDRRDVRFWSLDPSASFSCRSFFQFLVILGRVNTFDRLSRVKAP-VVGPFCCMLCR
        +VA++L      +S S G  RSL+D E+ +I ALL L+   S  S R DVR W  +P   FSC SFFQ L+     +    LS   +P +V P+      
Subjt:  TVADILGPVGSSTSFSFGFCRSLSDRETTDIMALLSLIEGASLRSDRRDVRFWSLDPSASFSCRSFFQFLVILGRVNTFDRLSRVKAP-VVGPFCCMLCR

Query:  KAEVNLDHLLWNCEYARSVWSLFFEVFKFRFASHRRCRDTIEEFLLHPPFRKKGKFLWHVGVCAILWGLWGERNNRIFRGIERHYCMKTAKSGLH
                 LW  +  +          K +F   +R +      ++ PPFR +G+FLW     A LWG+W ERNNR+FRG+E+     T  + +H
Subjt:  KAEVNLDHLLWNCEYARSVWSLFFEVFKFRFASHRRCRDTIEEFLLHPPFRKKGKFLWHVGVCAILWGLWGERNNRIFRGIERHYCMKTAKSGLH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G08750.1 RING/FYVE/PHD zinc finger superfamily protein3.4e-0688Show/hide
Query:  KTAKSGLHILLGGVCALTVVVFFRF
        +TAKSGLHILLGG+CALTVV+FFRF
Subjt:  KTAKSGLHILLGGVCALTVVVFFRF

AT5G08750.2 RING/FYVE/PHD zinc finger superfamily protein3.4e-0688Show/hide
Query:  KTAKSGLHILLGGVCALTVVVFFRF
        +TAKSGLHILLGG+CALTVV+FFRF
Subjt:  KTAKSGLHILLGGVCALTVVVFFRF

AT5G08750.3 RING/FYVE/PHD zinc finger superfamily protein3.4e-0688Show/hide
Query:  KTAKSGLHILLGGVCALTVVVFFRF
        +TAKSGLHILLGG+CALTVV+FFRF
Subjt:  KTAKSGLHILLGGVCALTVVVFFRF

AT5G63780.1 RING/FYVE/PHD zinc finger superfamily protein4.4e-0684Show/hide
Query:  KTAKSGLHILLGGVCALTVVVFFRF
        KTA+SGLHILLGG+CALT+V+FFRF
Subjt:  KTAKSGLHILLGGVCALTVVVFFRF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAATCGCACTGTGGCGGACATCCTTGGTCCTGTGGGGAGTTCCACTTCGTTTTCTTTTGGTTTTTGTCGTTCGTTATCTGATAGAGAGACCACGGACATCATGGC
CCTCTTATCTTTGATTGAGGGGGCTAGCCTTAGATCGGACAGGAGGGATGTGCGCTTTTGGAGTCTTGACCCCTCTGCGAGCTTTTCCTGCAGATCGTTCTTTCAGTTTC
TGGTCATCTTGGGCCGTGTTAACACTTTTGATAGGCTTTCGAGAGTGAAGGCTCCTGTGGTTGGTCCTTTTTGCTGCATGCTTTGTCGGAAGGCTGAGGTAAATCTTGAT
CATTTGTTATGGAATTGTGAGTATGCTCGCTCTGTCTGGAGTCTCTTCTTTGAGGTCTTCAAATTTCGTTTTGCGAGCCACCGCCGTTGTAGGGATACGATCGAGGAGTT
CCTCCTCCATCCGCCGTTCCGGAAGAAAGGAAAGTTTCTTTGGCATGTTGGTGTGTGTGCTATTTTGTGGGGTTTATGGGGGGAAAGGAACAATAGAATTTTTAGAGGAA
TTGAGAGACATTATTGTATGAAAACTGCGAAAAGTGGCCTTCATATTCTTCTTGGAGGTGTTTGTGCTTTAACAGTAGTGGTTTTCTTCCGTTTTGAACCTTCATCAGCA
CCAGCATCATTTCCTTCATCACTTGCCAAATTTATAGGTAGATATGTATCTGAGAAGGGCGCCACCATTAAAGATTCGTGGATTGGTGAAACAAACACATGGAGCCTATT
CTTGAGAAGGAACCTTATGGAGGCAGAAATCGAAGAGTGGATTAGGCTTAAGGGTATGCTCTCATCTTATCTTTTACTGAACAGAATGATATATGGGTATGGGGCTGGAC
AAAACTATGTGGGGGAAGACTCTAATGTTTATTTTTGGGAAGACACTTGGGTGGACAATAAACCTTTATGTATCTTATTCCCTCGTCTCTATTTCTTGTTAGAGAAGAGG
TTGCATTTGTTGGCCTCTGTGTTGCCTTCTCTTGACCCTGTTTCCTCGATTTCTCTTGGTTTTTACTTTTCATTACCCTCTTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAATCGCACTGTGGCGGACATCCTTGGTCCTGTGGGGAGTTCCACTTCGTTTTCTTTTGGTTTTTGTCGTTCGTTATCTGATAGAGAGACCACGGACATCATGGC
CCTCTTATCTTTGATTGAGGGGGCTAGCCTTAGATCGGACAGGAGGGATGTGCGCTTTTGGAGTCTTGACCCCTCTGCGAGCTTTTCCTGCAGATCGTTCTTTCAGTTTC
TGGTCATCTTGGGCCGTGTTAACACTTTTGATAGGCTTTCGAGAGTGAAGGCTCCTGTGGTTGGTCCTTTTTGCTGCATGCTTTGTCGGAAGGCTGAGGTAAATCTTGAT
CATTTGTTATGGAATTGTGAGTATGCTCGCTCTGTCTGGAGTCTCTTCTTTGAGGTCTTCAAATTTCGTTTTGCGAGCCACCGCCGTTGTAGGGATACGATCGAGGAGTT
CCTCCTCCATCCGCCGTTCCGGAAGAAAGGAAAGTTTCTTTGGCATGTTGGTGTGTGTGCTATTTTGTGGGGTTTATGGGGGGAAAGGAACAATAGAATTTTTAGAGGAA
TTGAGAGACATTATTGTATGAAAACTGCGAAAAGTGGCCTTCATATTCTTCTTGGAGGTGTTTGTGCTTTAACAGTAGTGGTTTTCTTCCGTTTTGAACCTTCATCAGCA
CCAGCATCATTTCCTTCATCACTTGCCAAATTTATAGGTAGATATGTATCTGAGAAGGGCGCCACCATTAAAGATTCGTGGATTGGTGAAACAAACACATGGAGCCTATT
CTTGAGAAGGAACCTTATGGAGGCAGAAATCGAAGAGTGGATTAGGCTTAAGGGTATGCTCTCATCTTATCTTTTACTGAACAGAATGATATATGGGTATGGGGCTGGAC
AAAACTATGTGGGGGAAGACTCTAATGTTTATTTTTGGGAAGACACTTGGGTGGACAATAAACCTTTATGTATCTTATTCCCTCGTCTCTATTTCTTGTTAGAGAAGAGG
TTGCATTTGTTGGCCTCTGTGTTGCCTTCTCTTGACCCTGTTTCCTCGATTTCTCTTGGTTTTTACTTTTCATTACCCTCTTTCTGA
Protein sequenceShow/hide protein sequence
MKNRTVADILGPVGSSTSFSFGFCRSLSDRETTDIMALLSLIEGASLRSDRRDVRFWSLDPSASFSCRSFFQFLVILGRVNTFDRLSRVKAPVVGPFCCMLCRKAEVNLD
HLLWNCEYARSVWSLFFEVFKFRFASHRRCRDTIEEFLLHPPFRKKGKFLWHVGVCAILWGLWGERNNRIFRGIERHYCMKTAKSGLHILLGGVCALTVVVFFRFEPSSA
PASFPSSLAKFIGRYVSEKGATIKDSWIGETNTWSLFLRRNLMEAEIEEWIRLKGMLSSYLLLNRMIYGYGAGQNYVGEDSNVYFWEDTWVDNKPLCILFPRLYFLLEKR
LHLLASVLPSLDPVSSISLGFYFSLPSF